Polymorphic microsatellite marker set for Carica papaya L. and its use in molecular-assisted selection.

Detalhes bibliográficos
Autor(a) principal: OLIVEIRA, E. J. de
Data de Publicação: 2010
Outros Autores: SILVA, A. dos S., CARVALHO, F. M. de, SANTOS, L. F. dos, COSTA, J. L., AMORIM, V. B. de O., DANTAS, J. L. L.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
Texto Completo: http://www.alice.cnptia.embrapa.br/alice/handle/doc/864169
Resumo: Conventional methods for the selection of papaya pure lines are time-consuming. Procedures involving the use of molecular markers and the indirect selection of homozygous plants can reduce this time considerably. The objective of this study was to evaluate the informativeness of a microsatellite marker set when used in marker-assisted selection (MAS) for the development of new papaya lines. Eighty-three lines originating from two segregating F3 populations and from papaya germplasm were used for the molecular analysis of 27 microsatellite primers. Twenty polymorphic microsatellite primers were identified, allowing the identification of 86 alleles, with an average of 3.18 alleles per primer. The observed heterozygosity values were low for both the markers (0.00?0.29) and the individual lines (0.00?0.35). The inbreeding coefficient (f) ranged from 0.634 to 1.00. Eleven lines with f = 1.00 and 18 lines with f varying from 0.953 to 0.961 were identified. In addition, papaya lines showed high genetic diversity, which will certainly contribute to the evelopment of new varieties. Our results show that the use of microsatellites in MAS is a quick and effective procedure for the development of papaya lines.
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spelling Polymorphic microsatellite marker set for Carica papaya L. and its use in molecular-assisted selection.MicrosatellitesMolecular-assisted selectionPapayainbred linesConventional methods for the selection of papaya pure lines are time-consuming. Procedures involving the use of molecular markers and the indirect selection of homozygous plants can reduce this time considerably. The objective of this study was to evaluate the informativeness of a microsatellite marker set when used in marker-assisted selection (MAS) for the development of new papaya lines. Eighty-three lines originating from two segregating F3 populations and from papaya germplasm were used for the molecular analysis of 27 microsatellite primers. Twenty polymorphic microsatellite primers were identified, allowing the identification of 86 alleles, with an average of 3.18 alleles per primer. The observed heterozygosity values were low for both the markers (0.00?0.29) and the individual lines (0.00?0.35). The inbreeding coefficient (f) ranged from 0.634 to 1.00. Eleven lines with f = 1.00 and 18 lines with f varying from 0.953 to 0.961 were identified. In addition, papaya lines showed high genetic diversity, which will certainly contribute to the evelopment of new varieties. Our results show that the use of microsatellites in MAS is a quick and effective procedure for the development of papaya lines.Disponivel em:<http://www.springerlink.com/content/31625u55t2134803/fulltext.pdf.> Acesso em: 14 out. 2010.EDER JORGE DE OLIVEIRA, CNPMF; Aline dos Santos Silva, UFRB; Fabiana Moraes de Carvalho, FAMAM; Lucas Ferraz dos Santos, UFRB; Juliana Leles Costa, UFRB; Vanusia Batista de Oliveira Amorim, UFRB; JORGE LUIZ LOYOLA DANTAS, CNPMF.OLIVEIRA, E. J. deSILVA, A. dos S.CARVALHO, F. M. deSANTOS, L. F. dosCOSTA, J. L.AMORIM, V. B. de O.DANTAS, J. L. L.2011-04-09T16:27:27Z2011-04-09T16:27:27Z2010-10-1420102011-04-10T11:11:11Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleEuphytica, Wageningen, v. 173, n. 2, p. 279-287, 2010.http://www.alice.cnptia.embrapa.br/alice/handle/doc/86416910.1007/s10681-010-0150-yenginfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)instacron:EMBRAPA2017-08-15T21:29:36Zoai:www.alice.cnptia.embrapa.br:doc/864169Repositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestopendoar:21542017-08-15T21:29:36falseRepositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestcg-riaa@embrapa.bropendoar:21542017-08-15T21:29:36Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)false
dc.title.none.fl_str_mv Polymorphic microsatellite marker set for Carica papaya L. and its use in molecular-assisted selection.
title Polymorphic microsatellite marker set for Carica papaya L. and its use in molecular-assisted selection.
spellingShingle Polymorphic microsatellite marker set for Carica papaya L. and its use in molecular-assisted selection.
OLIVEIRA, E. J. de
Microsatellites
Molecular-assisted selection
Papaya
inbred lines
title_short Polymorphic microsatellite marker set for Carica papaya L. and its use in molecular-assisted selection.
title_full Polymorphic microsatellite marker set for Carica papaya L. and its use in molecular-assisted selection.
title_fullStr Polymorphic microsatellite marker set for Carica papaya L. and its use in molecular-assisted selection.
title_full_unstemmed Polymorphic microsatellite marker set for Carica papaya L. and its use in molecular-assisted selection.
title_sort Polymorphic microsatellite marker set for Carica papaya L. and its use in molecular-assisted selection.
author OLIVEIRA, E. J. de
author_facet OLIVEIRA, E. J. de
SILVA, A. dos S.
CARVALHO, F. M. de
SANTOS, L. F. dos
COSTA, J. L.
AMORIM, V. B. de O.
DANTAS, J. L. L.
author_role author
author2 SILVA, A. dos S.
CARVALHO, F. M. de
SANTOS, L. F. dos
COSTA, J. L.
AMORIM, V. B. de O.
DANTAS, J. L. L.
author2_role author
author
author
author
author
author
dc.contributor.none.fl_str_mv EDER JORGE DE OLIVEIRA, CNPMF; Aline dos Santos Silva, UFRB; Fabiana Moraes de Carvalho, FAMAM; Lucas Ferraz dos Santos, UFRB; Juliana Leles Costa, UFRB; Vanusia Batista de Oliveira Amorim, UFRB; JORGE LUIZ LOYOLA DANTAS, CNPMF.
dc.contributor.author.fl_str_mv OLIVEIRA, E. J. de
SILVA, A. dos S.
CARVALHO, F. M. de
SANTOS, L. F. dos
COSTA, J. L.
AMORIM, V. B. de O.
DANTAS, J. L. L.
dc.subject.por.fl_str_mv Microsatellites
Molecular-assisted selection
Papaya
inbred lines
topic Microsatellites
Molecular-assisted selection
Papaya
inbred lines
description Conventional methods for the selection of papaya pure lines are time-consuming. Procedures involving the use of molecular markers and the indirect selection of homozygous plants can reduce this time considerably. The objective of this study was to evaluate the informativeness of a microsatellite marker set when used in marker-assisted selection (MAS) for the development of new papaya lines. Eighty-three lines originating from two segregating F3 populations and from papaya germplasm were used for the molecular analysis of 27 microsatellite primers. Twenty polymorphic microsatellite primers were identified, allowing the identification of 86 alleles, with an average of 3.18 alleles per primer. The observed heterozygosity values were low for both the markers (0.00?0.29) and the individual lines (0.00?0.35). The inbreeding coefficient (f) ranged from 0.634 to 1.00. Eleven lines with f = 1.00 and 18 lines with f varying from 0.953 to 0.961 were identified. In addition, papaya lines showed high genetic diversity, which will certainly contribute to the evelopment of new varieties. Our results show that the use of microsatellites in MAS is a quick and effective procedure for the development of papaya lines.
publishDate 2010
dc.date.none.fl_str_mv 2010-10-14
2010
2011-04-09T16:27:27Z
2011-04-09T16:27:27Z
2011-04-10T11:11:11Z
dc.type.driver.fl_str_mv info:eu-repo/semantics/publishedVersion
info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv Euphytica, Wageningen, v. 173, n. 2, p. 279-287, 2010.
http://www.alice.cnptia.embrapa.br/alice/handle/doc/864169
10.1007/s10681-010-0150-y
identifier_str_mv Euphytica, Wageningen, v. 173, n. 2, p. 279-287, 2010.
10.1007/s10681-010-0150-y
url http://www.alice.cnptia.embrapa.br/alice/handle/doc/864169
dc.language.iso.fl_str_mv eng
language eng
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
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dc.source.none.fl_str_mv reponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron:EMBRAPA
instname_str Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron_str EMBRAPA
institution EMBRAPA
reponame_str Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
collection Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
repository.name.fl_str_mv Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
repository.mail.fl_str_mv cg-riaa@embrapa.br
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