Diurnal oscillations of soybean circadian clock and drought responsive genes.

Detalhes bibliográficos
Autor(a) principal: MARCOLINO-GOMES, J.
Data de Publicação: 2014
Outros Autores: RODRIGUES, F. A., FUGANTI-PAGLIARINI, BENDIX, C., NAKAYAMA, T. J., CELAYA, B., MOLINARI, H. B. C., OLIVEIRA, M. C. N. de, HARMON, F. G., NEPOMUCENO, A. L.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
Texto Completo: http://www.alice.cnptia.embrapa.br/alice/handle/doc/978296
Resumo: Rhythms produced by the endogenous circadian clock play a critical role in allowing plants to respond and adapt to the environment. While there is a well-established regulatory link between the circadian clock and responses to abiotic stress in model plants, little is known of the circadian system in crop species like soybean. This study examines how drought impacts diurnal oscillation of both drought responsive and circadian clock genes in soybean. Drought stress induced marked changes in gene expression of several circadian clock-like components, such as LCL1-, GmELF4- and PRR-like genes, which had reduced expression in stressed plants. The same conditions produced a phase advance of expression for the GmTOC1- like, GmLUX-like and GmPRR7-like genes. Similarly, the rhythmic expression pattern of the soybean drought-responsive genes DREB-, bZIP-, GOLS-, RAB18- and Remorin-like changed significantly after plant exposure to drought. In silico analysis of promoter regions of these genes revealed the presence of cis-elements associated both with stress and circadian clock regulation. Furthermore, some soybean genes with upstream ABRE elements were responsive to abscisic acid treatment. Our results indicate that some connection between the drought response and the circadian clock may exist in soybean since (i) drought stress affects gene expression of circadian clock components and (ii) several stress responsive genes display diurnal oscillation in soybeans.
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spelling Diurnal oscillations of soybean circadian clock and drought responsive genes.SojaSoybeansRhythms produced by the endogenous circadian clock play a critical role in allowing plants to respond and adapt to the environment. While there is a well-established regulatory link between the circadian clock and responses to abiotic stress in model plants, little is known of the circadian system in crop species like soybean. This study examines how drought impacts diurnal oscillation of both drought responsive and circadian clock genes in soybean. Drought stress induced marked changes in gene expression of several circadian clock-like components, such as LCL1-, GmELF4- and PRR-like genes, which had reduced expression in stressed plants. The same conditions produced a phase advance of expression for the GmTOC1- like, GmLUX-like and GmPRR7-like genes. Similarly, the rhythmic expression pattern of the soybean drought-responsive genes DREB-, bZIP-, GOLS-, RAB18- and Remorin-like changed significantly after plant exposure to drought. In silico analysis of promoter regions of these genes revealed the presence of cis-elements associated both with stress and circadian clock regulation. Furthermore, some soybean genes with upstream ABRE elements were responsive to abscisic acid treatment. Our results indicate that some connection between the drought response and the circadian clock may exist in soybean since (i) drought stress affects gene expression of circadian clock components and (ii) several stress responsive genes display diurnal oscillation in soybeans.JULIANA MARCOLINO-GOMES, UEL; FABIANA APARECIDA RODRIGUES, CNPSo; RENATA FUGANTI-PAGLIARINI, CNPSO; CLAIRE BENDIX, ARS/USDA; THIAGO JONAS NAKAYAMA, UFV; BRANDON CELAYA, ARS/USDA; HUGO BRUNO CORREA MOLINARI, LABEX USA; MARIA CRISTINA NEVES DE OLIVEIRA, CNPSO; FRANK G. HARMON, ARS/USDA; ALEXANDRE LIMA NEPOMUCENO, CNPSo - Labex USA.MARCOLINO-GOMES, J.RODRIGUES, F. A.FUGANTI-PAGLIARINIBENDIX, C.NAKAYAMA, T. J.CELAYA, B.MOLINARI, H. B. C.OLIVEIRA, M. C. N. deHARMON, F. G.NEPOMUCENO, A. L.2014-02-03T11:11:11Z2014-02-03T11:11:11Z2014-02-0320142015-11-11T11:11:11Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article13 p.Plos One, v. 9, n. 1, e86402, Jan. 2014.http://www.alice.cnptia.embrapa.br/alice/handle/doc/97829610.1371/journal.pone.0086402enginfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)instacron:EMBRAPA2017-08-16T00:59:32Zoai:www.alice.cnptia.embrapa.br:doc/978296Repositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestopendoar:21542017-08-16T00:59:32falseRepositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestcg-riaa@embrapa.bropendoar:21542017-08-16T00:59:32Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)false
dc.title.none.fl_str_mv Diurnal oscillations of soybean circadian clock and drought responsive genes.
title Diurnal oscillations of soybean circadian clock and drought responsive genes.
spellingShingle Diurnal oscillations of soybean circadian clock and drought responsive genes.
MARCOLINO-GOMES, J.
Soja
Soybeans
title_short Diurnal oscillations of soybean circadian clock and drought responsive genes.
title_full Diurnal oscillations of soybean circadian clock and drought responsive genes.
title_fullStr Diurnal oscillations of soybean circadian clock and drought responsive genes.
title_full_unstemmed Diurnal oscillations of soybean circadian clock and drought responsive genes.
title_sort Diurnal oscillations of soybean circadian clock and drought responsive genes.
author MARCOLINO-GOMES, J.
author_facet MARCOLINO-GOMES, J.
RODRIGUES, F. A.
FUGANTI-PAGLIARINI
BENDIX, C.
NAKAYAMA, T. J.
CELAYA, B.
MOLINARI, H. B. C.
OLIVEIRA, M. C. N. de
HARMON, F. G.
NEPOMUCENO, A. L.
author_role author
author2 RODRIGUES, F. A.
FUGANTI-PAGLIARINI
BENDIX, C.
NAKAYAMA, T. J.
CELAYA, B.
MOLINARI, H. B. C.
OLIVEIRA, M. C. N. de
HARMON, F. G.
NEPOMUCENO, A. L.
author2_role author
author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv JULIANA MARCOLINO-GOMES, UEL; FABIANA APARECIDA RODRIGUES, CNPSo; RENATA FUGANTI-PAGLIARINI, CNPSO; CLAIRE BENDIX, ARS/USDA; THIAGO JONAS NAKAYAMA, UFV; BRANDON CELAYA, ARS/USDA; HUGO BRUNO CORREA MOLINARI, LABEX USA; MARIA CRISTINA NEVES DE OLIVEIRA, CNPSO; FRANK G. HARMON, ARS/USDA; ALEXANDRE LIMA NEPOMUCENO, CNPSo - Labex USA.
dc.contributor.author.fl_str_mv MARCOLINO-GOMES, J.
RODRIGUES, F. A.
FUGANTI-PAGLIARINI
BENDIX, C.
NAKAYAMA, T. J.
CELAYA, B.
MOLINARI, H. B. C.
OLIVEIRA, M. C. N. de
HARMON, F. G.
NEPOMUCENO, A. L.
dc.subject.por.fl_str_mv Soja
Soybeans
topic Soja
Soybeans
description Rhythms produced by the endogenous circadian clock play a critical role in allowing plants to respond and adapt to the environment. While there is a well-established regulatory link between the circadian clock and responses to abiotic stress in model plants, little is known of the circadian system in crop species like soybean. This study examines how drought impacts diurnal oscillation of both drought responsive and circadian clock genes in soybean. Drought stress induced marked changes in gene expression of several circadian clock-like components, such as LCL1-, GmELF4- and PRR-like genes, which had reduced expression in stressed plants. The same conditions produced a phase advance of expression for the GmTOC1- like, GmLUX-like and GmPRR7-like genes. Similarly, the rhythmic expression pattern of the soybean drought-responsive genes DREB-, bZIP-, GOLS-, RAB18- and Remorin-like changed significantly after plant exposure to drought. In silico analysis of promoter regions of these genes revealed the presence of cis-elements associated both with stress and circadian clock regulation. Furthermore, some soybean genes with upstream ABRE elements were responsive to abscisic acid treatment. Our results indicate that some connection between the drought response and the circadian clock may exist in soybean since (i) drought stress affects gene expression of circadian clock components and (ii) several stress responsive genes display diurnal oscillation in soybeans.
publishDate 2014
dc.date.none.fl_str_mv 2014-02-03T11:11:11Z
2014-02-03T11:11:11Z
2014-02-03
2014
2015-11-11T11:11:11Z
dc.type.driver.fl_str_mv info:eu-repo/semantics/publishedVersion
info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv Plos One, v. 9, n. 1, e86402, Jan. 2014.
http://www.alice.cnptia.embrapa.br/alice/handle/doc/978296
10.1371/journal.pone.0086402
identifier_str_mv Plos One, v. 9, n. 1, e86402, Jan. 2014.
10.1371/journal.pone.0086402
url http://www.alice.cnptia.embrapa.br/alice/handle/doc/978296
dc.language.iso.fl_str_mv eng
language eng
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv 13 p.
dc.source.none.fl_str_mv reponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
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instname_str Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron_str EMBRAPA
institution EMBRAPA
reponame_str Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
collection Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
repository.name.fl_str_mv Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
repository.mail.fl_str_mv cg-riaa@embrapa.br
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