Paraburkholderia nodosa is the main N2-fixing species trapped by promiscuous common bean (Phaseolus vulgaris L.) in the Brazilian 'Cerradão'.

Detalhes bibliográficos
Autor(a) principal: DALL'AGNOL, R. F.
Data de Publicação: 2016
Outros Autores: PLOTEGHER, F., SOUZA, R. C., MENDES, I. de C., REIS JUNIOR, F. B. dos, BÉNA, G., MOULIN, L., HUNGRIA, M.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
Texto Completo: http://www.alice.cnptia.embrapa.br/alice/handle/doc/1056811
Resumo: The bacterial genus Burkholderia comprises species occupying several habitats, including a group of symbionts of leguminous plants?also called beta-rhizobia?that has been recently ascribed to the new genus Paraburkholderia. Weused common bean ( Phaseolus vulgaris L.) plants to trap rhizobia from an undisturbed soil of the Brazilian Cerrado under the vegetation type ?Cerradão?. Genetic characterization started with the analyses of 181 isolates by BOX-PCR, where the majority revealed unique profiles, indicating high inter- and intra-species diversity. Restriction fragment length polymorphism-PCR of the 16S rRNA of representative strains of the BOX-PCR groups indicated two main clusters, and gene-sequencing analysis identified the minority (27%) as Rhizobium and the majority (73%) as Paraburkholderia. Phylogenetic analyses of the 16S rRNA and housekeeping (recA and gyrB) genes positioned all strains of the second cluster in the species P. nodosa , and the phylogeny of a symbiotic gene?nodC ?was in agreement with the conserved genes. All isolates were stable vis-à-vis nodulating common bean, but, in general, with a low capacity for fixing N2 , although some effective strains were identified. The predominance of P. nodosa might be associated with the edaphic properties of the Cerrado biome, and might represent an important role in terms of maintenance of the ecosystem, which is characterized by acid soils with high saturation of aluminum and low N2 content.
id EMBR_f2dd35f4921f6326d8572c43001c1d11
oai_identifier_str oai:www.alice.cnptia.embrapa.br:doc/1056811
network_acronym_str EMBR
network_name_str Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
repository_id_str 2154
spelling Paraburkholderia nodosa is the main N2-fixing species trapped by promiscuous common bean (Phaseolus vulgaris L.) in the Brazilian 'Cerradão'.Fixação biológica de nitrogênioCerradoThe bacterial genus Burkholderia comprises species occupying several habitats, including a group of symbionts of leguminous plants?also called beta-rhizobia?that has been recently ascribed to the new genus Paraburkholderia. Weused common bean ( Phaseolus vulgaris L.) plants to trap rhizobia from an undisturbed soil of the Brazilian Cerrado under the vegetation type ?Cerradão?. Genetic characterization started with the analyses of 181 isolates by BOX-PCR, where the majority revealed unique profiles, indicating high inter- and intra-species diversity. Restriction fragment length polymorphism-PCR of the 16S rRNA of representative strains of the BOX-PCR groups indicated two main clusters, and gene-sequencing analysis identified the minority (27%) as Rhizobium and the majority (73%) as Paraburkholderia. Phylogenetic analyses of the 16S rRNA and housekeeping (recA and gyrB) genes positioned all strains of the second cluster in the species P. nodosa , and the phylogeny of a symbiotic gene?nodC ?was in agreement with the conserved genes. All isolates were stable vis-à-vis nodulating common bean, but, in general, with a low capacity for fixing N2 , although some effective strains were identified. The predominance of P. nodosa might be associated with the edaphic properties of the Cerrado biome, and might represent an important role in terms of maintenance of the ecosystem, which is characterized by acid soils with high saturation of aluminum and low N2 content.REBECA F. DALL'AGNOL, UEL; FÁBIO PLOTEGHER; RENATA C. SOUZA, UFPR; IEDA DE CARVALHO MENDES, CPAC; FABIO BUENO DOS REIS JUNIOR, CPAC; GILLES BÉNA, IRD, CIRAD, Montpellier; LIONEL MOULIN, IRD, CIRAD, Montpellier; MARIANGELA HUNGRIA DA CUNHA, CNPSO.DALL'AGNOL, R. F.PLOTEGHER, F.SOUZA, R. C.MENDES, I. de C.REIS JUNIOR, F. B. dosBÉNA, G.MOULIN, L.HUNGRIA, M.2016-11-22T11:11:11Z2016-11-22T11:11:11Z2016-11-2220162016-11-23T11:11:11Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleFEMS Microbiology Ecology, 2016, v. 92, n. 8, 14 p., nov. 2016.http://www.alice.cnptia.embrapa.br/alice/handle/doc/105681110.1093/femsec/fiw108enginfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)instacron:EMBRAPA2017-08-16T03:49:05Zoai:www.alice.cnptia.embrapa.br:doc/1056811Repositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestopendoar:21542017-08-16T03:49:05falseRepositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestcg-riaa@embrapa.bropendoar:21542017-08-16T03:49:05Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)false
dc.title.none.fl_str_mv Paraburkholderia nodosa is the main N2-fixing species trapped by promiscuous common bean (Phaseolus vulgaris L.) in the Brazilian 'Cerradão'.
title Paraburkholderia nodosa is the main N2-fixing species trapped by promiscuous common bean (Phaseolus vulgaris L.) in the Brazilian 'Cerradão'.
spellingShingle Paraburkholderia nodosa is the main N2-fixing species trapped by promiscuous common bean (Phaseolus vulgaris L.) in the Brazilian 'Cerradão'.
DALL'AGNOL, R. F.
Fixação biológica de nitrogênio
Cerrado
title_short Paraburkholderia nodosa is the main N2-fixing species trapped by promiscuous common bean (Phaseolus vulgaris L.) in the Brazilian 'Cerradão'.
title_full Paraburkholderia nodosa is the main N2-fixing species trapped by promiscuous common bean (Phaseolus vulgaris L.) in the Brazilian 'Cerradão'.
title_fullStr Paraburkholderia nodosa is the main N2-fixing species trapped by promiscuous common bean (Phaseolus vulgaris L.) in the Brazilian 'Cerradão'.
title_full_unstemmed Paraburkholderia nodosa is the main N2-fixing species trapped by promiscuous common bean (Phaseolus vulgaris L.) in the Brazilian 'Cerradão'.
title_sort Paraburkholderia nodosa is the main N2-fixing species trapped by promiscuous common bean (Phaseolus vulgaris L.) in the Brazilian 'Cerradão'.
author DALL'AGNOL, R. F.
author_facet DALL'AGNOL, R. F.
PLOTEGHER, F.
SOUZA, R. C.
MENDES, I. de C.
REIS JUNIOR, F. B. dos
BÉNA, G.
MOULIN, L.
HUNGRIA, M.
author_role author
author2 PLOTEGHER, F.
SOUZA, R. C.
MENDES, I. de C.
REIS JUNIOR, F. B. dos
BÉNA, G.
MOULIN, L.
HUNGRIA, M.
author2_role author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv REBECA F. DALL'AGNOL, UEL; FÁBIO PLOTEGHER; RENATA C. SOUZA, UFPR; IEDA DE CARVALHO MENDES, CPAC; FABIO BUENO DOS REIS JUNIOR, CPAC; GILLES BÉNA, IRD, CIRAD, Montpellier; LIONEL MOULIN, IRD, CIRAD, Montpellier; MARIANGELA HUNGRIA DA CUNHA, CNPSO.
dc.contributor.author.fl_str_mv DALL'AGNOL, R. F.
PLOTEGHER, F.
SOUZA, R. C.
MENDES, I. de C.
REIS JUNIOR, F. B. dos
BÉNA, G.
MOULIN, L.
HUNGRIA, M.
dc.subject.por.fl_str_mv Fixação biológica de nitrogênio
Cerrado
topic Fixação biológica de nitrogênio
Cerrado
description The bacterial genus Burkholderia comprises species occupying several habitats, including a group of symbionts of leguminous plants?also called beta-rhizobia?that has been recently ascribed to the new genus Paraburkholderia. Weused common bean ( Phaseolus vulgaris L.) plants to trap rhizobia from an undisturbed soil of the Brazilian Cerrado under the vegetation type ?Cerradão?. Genetic characterization started with the analyses of 181 isolates by BOX-PCR, where the majority revealed unique profiles, indicating high inter- and intra-species diversity. Restriction fragment length polymorphism-PCR of the 16S rRNA of representative strains of the BOX-PCR groups indicated two main clusters, and gene-sequencing analysis identified the minority (27%) as Rhizobium and the majority (73%) as Paraburkholderia. Phylogenetic analyses of the 16S rRNA and housekeeping (recA and gyrB) genes positioned all strains of the second cluster in the species P. nodosa , and the phylogeny of a symbiotic gene?nodC ?was in agreement with the conserved genes. All isolates were stable vis-à-vis nodulating common bean, but, in general, with a low capacity for fixing N2 , although some effective strains were identified. The predominance of P. nodosa might be associated with the edaphic properties of the Cerrado biome, and might represent an important role in terms of maintenance of the ecosystem, which is characterized by acid soils with high saturation of aluminum and low N2 content.
publishDate 2016
dc.date.none.fl_str_mv 2016-11-22T11:11:11Z
2016-11-22T11:11:11Z
2016-11-22
2016
2016-11-23T11:11:11Z
dc.type.driver.fl_str_mv info:eu-repo/semantics/publishedVersion
info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv FEMS Microbiology Ecology, 2016, v. 92, n. 8, 14 p., nov. 2016.
http://www.alice.cnptia.embrapa.br/alice/handle/doc/1056811
10.1093/femsec/fiw108
identifier_str_mv FEMS Microbiology Ecology, 2016, v. 92, n. 8, 14 p., nov. 2016.
10.1093/femsec/fiw108
url http://www.alice.cnptia.embrapa.br/alice/handle/doc/1056811
dc.language.iso.fl_str_mv eng
language eng
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.source.none.fl_str_mv reponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron:EMBRAPA
instname_str Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron_str EMBRAPA
institution EMBRAPA
reponame_str Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
collection Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
repository.name.fl_str_mv Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
repository.mail.fl_str_mv cg-riaa@embrapa.br
_version_ 1794503428563533824