Molecular characterization of 'sweet' cassavas (Manihot esculenta) from a germplasm bank in Brazilian Eastern Amazonia.

Detalhes bibliográficos
Autor(a) principal: CUNHA, E. F. M.
Data de Publicação: 2016
Outros Autores: SILVA, C. R. de S., ALBUQUERQUE, P. S. B. de, RAMALHO, G. F., PONTES, L. C. G., FARIAS NETO, J. T. de
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
Texto Completo: http://www.alice.cnptia.embrapa.br/alice/handle/doc/1046144
http://dx.doi.org/10.1590/1984-70332016v16n1a5
Resumo: Genetic variability of a set of 81 accessions of ?sweet? cassavas (Manihot esculenta) collected mostly in the North region of Brazil was investigated with nine microsatellite loci. All loci were polymorphic, with mean of 6.33 alleles per locus. Analyses indicated that 35 multiloci profiles were represented by a single accession, and 46 showed non-unique profiles, represented by eleven genotypes. Forty-six different multiloci profiles were detected. Most of the putative duplicated accessions were collected in different locations. After the removal of putative duplicated genotypes, genetic parameters were estimated and expected heterozygosity was high (HE=0.73), indicating genetic variability. Structure analysis of this set of ?sweet? cassavas divided the 46 genotypes into two clusters (K=2), and a few genotypes had mixed ancestry. Results indicated the habit of exchange of materials among farmers of the North region of Brazil, and the genetic variability to be exploited in genetic breeding efforts
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spelling Molecular characterization of 'sweet' cassavas (Manihot esculenta) from a germplasm bank in Brazilian Eastern Amazonia.Recursos genéticosMacaxeiraBanco de GermoplasmaMandiocaManihot Esculentagenetic resourcescassavaGenetic variability of a set of 81 accessions of ?sweet? cassavas (Manihot esculenta) collected mostly in the North region of Brazil was investigated with nine microsatellite loci. All loci were polymorphic, with mean of 6.33 alleles per locus. Analyses indicated that 35 multiloci profiles were represented by a single accession, and 46 showed non-unique profiles, represented by eleven genotypes. Forty-six different multiloci profiles were detected. Most of the putative duplicated accessions were collected in different locations. After the removal of putative duplicated genotypes, genetic parameters were estimated and expected heterozygosity was high (HE=0.73), indicating genetic variability. Structure analysis of this set of ?sweet? cassavas divided the 46 genotypes into two clusters (K=2), and a few genotypes had mixed ancestry. Results indicated the habit of exchange of materials among farmers of the North region of Brazil, and the genetic variability to be exploited in genetic breeding effortsELISA FERREIRA MOURA CUNHA, CPATU; Carlos Rogério de Sousa Silva, Comissão Executiva do Plano da Lavoura Cacaueira; Paulo Sérgio Bevilaqua de Albuquerque, Comissão Executiva do Plano da Lavoura Cacaueira; Girena Fernandes Ramalho, UFPA; Lígia Cristine Gonçalves Pontes, UFPA; JOAO TOME DE FARIAS NETO, CPATU.CUNHA, E. F. M.SILVA, C. R. de S.ALBUQUERQUE, P. S. B. deRAMALHO, G. F.PONTES, L. C. G.FARIAS NETO, J. T. de2016-06-02T11:11:11Z2016-06-02T11:11:11Z2016-06-0220162017-09-28T11:11:11Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleCrop Breeding and Applied Biotechnology, v. 16, n. 1, p. 28-34, 2016.http://www.alice.cnptia.embrapa.br/alice/handle/doc/1046144http://dx.doi.org/10.1590/1984-70332016v16n1a5enginfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)instacron:EMBRAPA2017-08-16T03:42:23Zoai:www.alice.cnptia.embrapa.br:doc/1046144Repositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestopendoar:21542017-08-16T03:42:23falseRepositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestcg-riaa@embrapa.bropendoar:21542017-08-16T03:42:23Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)false
dc.title.none.fl_str_mv Molecular characterization of 'sweet' cassavas (Manihot esculenta) from a germplasm bank in Brazilian Eastern Amazonia.
title Molecular characterization of 'sweet' cassavas (Manihot esculenta) from a germplasm bank in Brazilian Eastern Amazonia.
spellingShingle Molecular characterization of 'sweet' cassavas (Manihot esculenta) from a germplasm bank in Brazilian Eastern Amazonia.
CUNHA, E. F. M.
Recursos genéticos
Macaxeira
Banco de Germoplasma
Mandioca
Manihot Esculenta
genetic resources
cassava
title_short Molecular characterization of 'sweet' cassavas (Manihot esculenta) from a germplasm bank in Brazilian Eastern Amazonia.
title_full Molecular characterization of 'sweet' cassavas (Manihot esculenta) from a germplasm bank in Brazilian Eastern Amazonia.
title_fullStr Molecular characterization of 'sweet' cassavas (Manihot esculenta) from a germplasm bank in Brazilian Eastern Amazonia.
title_full_unstemmed Molecular characterization of 'sweet' cassavas (Manihot esculenta) from a germplasm bank in Brazilian Eastern Amazonia.
title_sort Molecular characterization of 'sweet' cassavas (Manihot esculenta) from a germplasm bank in Brazilian Eastern Amazonia.
author CUNHA, E. F. M.
author_facet CUNHA, E. F. M.
SILVA, C. R. de S.
ALBUQUERQUE, P. S. B. de
RAMALHO, G. F.
PONTES, L. C. G.
FARIAS NETO, J. T. de
author_role author
author2 SILVA, C. R. de S.
ALBUQUERQUE, P. S. B. de
RAMALHO, G. F.
PONTES, L. C. G.
FARIAS NETO, J. T. de
author2_role author
author
author
author
author
dc.contributor.none.fl_str_mv ELISA FERREIRA MOURA CUNHA, CPATU; Carlos Rogério de Sousa Silva, Comissão Executiva do Plano da Lavoura Cacaueira; Paulo Sérgio Bevilaqua de Albuquerque, Comissão Executiva do Plano da Lavoura Cacaueira; Girena Fernandes Ramalho, UFPA; Lígia Cristine Gonçalves Pontes, UFPA; JOAO TOME DE FARIAS NETO, CPATU.
dc.contributor.author.fl_str_mv CUNHA, E. F. M.
SILVA, C. R. de S.
ALBUQUERQUE, P. S. B. de
RAMALHO, G. F.
PONTES, L. C. G.
FARIAS NETO, J. T. de
dc.subject.por.fl_str_mv Recursos genéticos
Macaxeira
Banco de Germoplasma
Mandioca
Manihot Esculenta
genetic resources
cassava
topic Recursos genéticos
Macaxeira
Banco de Germoplasma
Mandioca
Manihot Esculenta
genetic resources
cassava
description Genetic variability of a set of 81 accessions of ?sweet? cassavas (Manihot esculenta) collected mostly in the North region of Brazil was investigated with nine microsatellite loci. All loci were polymorphic, with mean of 6.33 alleles per locus. Analyses indicated that 35 multiloci profiles were represented by a single accession, and 46 showed non-unique profiles, represented by eleven genotypes. Forty-six different multiloci profiles were detected. Most of the putative duplicated accessions were collected in different locations. After the removal of putative duplicated genotypes, genetic parameters were estimated and expected heterozygosity was high (HE=0.73), indicating genetic variability. Structure analysis of this set of ?sweet? cassavas divided the 46 genotypes into two clusters (K=2), and a few genotypes had mixed ancestry. Results indicated the habit of exchange of materials among farmers of the North region of Brazil, and the genetic variability to be exploited in genetic breeding efforts
publishDate 2016
dc.date.none.fl_str_mv 2016-06-02T11:11:11Z
2016-06-02T11:11:11Z
2016-06-02
2016
2017-09-28T11:11:11Z
dc.type.driver.fl_str_mv info:eu-repo/semantics/publishedVersion
info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv Crop Breeding and Applied Biotechnology, v. 16, n. 1, p. 28-34, 2016.
http://www.alice.cnptia.embrapa.br/alice/handle/doc/1046144
http://dx.doi.org/10.1590/1984-70332016v16n1a5
identifier_str_mv Crop Breeding and Applied Biotechnology, v. 16, n. 1, p. 28-34, 2016.
url http://www.alice.cnptia.embrapa.br/alice/handle/doc/1046144
http://dx.doi.org/10.1590/1984-70332016v16n1a5
dc.language.iso.fl_str_mv eng
language eng
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.source.none.fl_str_mv reponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron:EMBRAPA
instname_str Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron_str EMBRAPA
institution EMBRAPA
reponame_str Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
collection Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
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repository.mail.fl_str_mv cg-riaa@embrapa.br
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