A survey of RNA genome viruses in Lima bean crops of Northeastern Brazil

Detalhes bibliográficos
Autor(a) principal: Medeiros,Layla de Sá Andrade
Data de Publicação: 2020
Outros Autores: Oliveira,Izaías Araújo de, Kitajima,Elliot Watanabe, Eiras,Marcelo, Pereira,Helen Jesus, Ribeiro,Simone Graça, Matos,Kedma da Silva, Beserra Júnior,José Evando Aguiar
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Bragantia
Texto Completo: http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0006-87052020000300407
Resumo: ABSTRACT Lima bean plants showing mosaic and leaf distortion symptoms, similar to those induced by viruses, were observed in several production areas in the states of Ceará and Piauí, Northeastern Brazil. The aim of this study was to identify RNA genome viruses that infect lima bean. Field research was conducted from 2017 to 2018. Fifty-five symptomatic samples were randomly collected from seven properties in five municipalities and tested by RT-PCR and DNA sequencing with specific or universal primers for two viruses and two virus groups. Four virus species were identified: cucumber mosaic virus (CMV), cowpea mild mottle virus (CPMMV), cowpea aphid-borne mosaic virus (CABMV) and cowpea severe mosaic virus (CPSMV), which had infection levels of 21.8, 52.7, 47.2, and 1.8%, respectively, as well as double and triple infections. The CMV isolates belonged to subgroup IA. The CPMMV isolates had high nucleotide identity with CPMMV isolates from Brazil, USA and Mexico. The CABMV isolates showed moderate nucleotide identity with Brazilian isolates. Only one sample was infected with CPSMV. This is the first record of CPMMV and CPSMV naturally infecting lima bean. Approaches to virus control are discussed.
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spelling A survey of RNA genome viruses in Lima bean crops of Northeastern BrazilcarlaviruscomoviruscucumovirusPhaseolus lunatuspotyvirusvirus identificationABSTRACT Lima bean plants showing mosaic and leaf distortion symptoms, similar to those induced by viruses, were observed in several production areas in the states of Ceará and Piauí, Northeastern Brazil. The aim of this study was to identify RNA genome viruses that infect lima bean. Field research was conducted from 2017 to 2018. Fifty-five symptomatic samples were randomly collected from seven properties in five municipalities and tested by RT-PCR and DNA sequencing with specific or universal primers for two viruses and two virus groups. Four virus species were identified: cucumber mosaic virus (CMV), cowpea mild mottle virus (CPMMV), cowpea aphid-borne mosaic virus (CABMV) and cowpea severe mosaic virus (CPSMV), which had infection levels of 21.8, 52.7, 47.2, and 1.8%, respectively, as well as double and triple infections. The CMV isolates belonged to subgroup IA. The CPMMV isolates had high nucleotide identity with CPMMV isolates from Brazil, USA and Mexico. The CABMV isolates showed moderate nucleotide identity with Brazilian isolates. Only one sample was infected with CPSMV. This is the first record of CPMMV and CPSMV naturally infecting lima bean. Approaches to virus control are discussed.Instituto Agronômico de Campinas2020-09-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S0006-87052020000300407Bragantia v.79 n.3 2020reponame:Bragantiainstname:Instituto Agronômico de Campinas (IAC)instacron:IAC10.1590/1678-4499.20190467info:eu-repo/semantics/openAccessMedeiros,Layla de Sá AndradeOliveira,Izaías Araújo deKitajima,Elliot WatanabeEiras,MarceloPereira,Helen JesusRibeiro,Simone GraçaMatos,Kedma da SilvaBeserra Júnior,José Evando Aguiareng2020-08-31T00:00:00Zoai:scielo:S0006-87052020000300407Revistahttps://www.scielo.br/j/brag/https://old.scielo.br/oai/scielo-oai.phpbragantia@iac.sp.gov.br||bragantia@iac.sp.gov.br1678-44990006-8705opendoar:2020-08-31T00:00Bragantia - Instituto Agronômico de Campinas (IAC)false
dc.title.none.fl_str_mv A survey of RNA genome viruses in Lima bean crops of Northeastern Brazil
title A survey of RNA genome viruses in Lima bean crops of Northeastern Brazil
spellingShingle A survey of RNA genome viruses in Lima bean crops of Northeastern Brazil
Medeiros,Layla de Sá Andrade
carlavirus
comovirus
cucumovirus
Phaseolus lunatus
potyvirus
virus identification
title_short A survey of RNA genome viruses in Lima bean crops of Northeastern Brazil
title_full A survey of RNA genome viruses in Lima bean crops of Northeastern Brazil
title_fullStr A survey of RNA genome viruses in Lima bean crops of Northeastern Brazil
title_full_unstemmed A survey of RNA genome viruses in Lima bean crops of Northeastern Brazil
title_sort A survey of RNA genome viruses in Lima bean crops of Northeastern Brazil
author Medeiros,Layla de Sá Andrade
author_facet Medeiros,Layla de Sá Andrade
Oliveira,Izaías Araújo de
Kitajima,Elliot Watanabe
Eiras,Marcelo
Pereira,Helen Jesus
Ribeiro,Simone Graça
Matos,Kedma da Silva
Beserra Júnior,José Evando Aguiar
author_role author
author2 Oliveira,Izaías Araújo de
Kitajima,Elliot Watanabe
Eiras,Marcelo
Pereira,Helen Jesus
Ribeiro,Simone Graça
Matos,Kedma da Silva
Beserra Júnior,José Evando Aguiar
author2_role author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Medeiros,Layla de Sá Andrade
Oliveira,Izaías Araújo de
Kitajima,Elliot Watanabe
Eiras,Marcelo
Pereira,Helen Jesus
Ribeiro,Simone Graça
Matos,Kedma da Silva
Beserra Júnior,José Evando Aguiar
dc.subject.por.fl_str_mv carlavirus
comovirus
cucumovirus
Phaseolus lunatus
potyvirus
virus identification
topic carlavirus
comovirus
cucumovirus
Phaseolus lunatus
potyvirus
virus identification
description ABSTRACT Lima bean plants showing mosaic and leaf distortion symptoms, similar to those induced by viruses, were observed in several production areas in the states of Ceará and Piauí, Northeastern Brazil. The aim of this study was to identify RNA genome viruses that infect lima bean. Field research was conducted from 2017 to 2018. Fifty-five symptomatic samples were randomly collected from seven properties in five municipalities and tested by RT-PCR and DNA sequencing with specific or universal primers for two viruses and two virus groups. Four virus species were identified: cucumber mosaic virus (CMV), cowpea mild mottle virus (CPMMV), cowpea aphid-borne mosaic virus (CABMV) and cowpea severe mosaic virus (CPSMV), which had infection levels of 21.8, 52.7, 47.2, and 1.8%, respectively, as well as double and triple infections. The CMV isolates belonged to subgroup IA. The CPMMV isolates had high nucleotide identity with CPMMV isolates from Brazil, USA and Mexico. The CABMV isolates showed moderate nucleotide identity with Brazilian isolates. Only one sample was infected with CPSMV. This is the first record of CPMMV and CPSMV naturally infecting lima bean. Approaches to virus control are discussed.
publishDate 2020
dc.date.none.fl_str_mv 2020-09-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0006-87052020000300407
url http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0006-87052020000300407
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 10.1590/1678-4499.20190467
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv text/html
dc.publisher.none.fl_str_mv Instituto Agronômico de Campinas
publisher.none.fl_str_mv Instituto Agronômico de Campinas
dc.source.none.fl_str_mv Bragantia v.79 n.3 2020
reponame:Bragantia
instname:Instituto Agronômico de Campinas (IAC)
instacron:IAC
instname_str Instituto Agronômico de Campinas (IAC)
instacron_str IAC
institution IAC
reponame_str Bragantia
collection Bragantia
repository.name.fl_str_mv Bragantia - Instituto Agronômico de Campinas (IAC)
repository.mail.fl_str_mv bragantia@iac.sp.gov.br||bragantia@iac.sp.gov.br
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