Immune escape mutations in HIV-1 controllers in the Brazilian Amazon region

Detalhes bibliográficos
Autor(a) principal: Gomes, Samara Tatielle Monteiro
Data de Publicação: 2020
Outros Autores: Amoras, Ednelza da Silva Graça, Gomes, Érica Ribeiro, Queiroz, Maria Alice Freitas, Sousa Júnior, Edivaldo Costa, Massafra, Janaína Mota de Vasconcelos, Lemos, Poliana da Silva, Vianez Júnior, João Lídio da Silva Gonçalves, Vallinoto, Antonio Carlos Rosário
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Digital do Instituto Evandro Chagas (Patuá)
Texto Completo: https://patua.iec.gov.br/handle/iec/4142
Resumo: Background: Human immunodeficiency virus (HIV-1) infection is characterized by high viral replication and a decrease in CD4+ T cells (CD4+TC), resulting in AIDS, which can lead to death. In elite controllers and viremia controllers, viral replication is naturally controlled, with maintenance of CD4+TC levels without the use of antiretroviral therapy (ART). Methods: The aim of the present study was to describe virological and immunological risk factors among HIV-1-infected individuals according to characteristics of progression to AIDS. The sample included 30 treatment-naive patients classified into three groups based on infection duration (> 6 years), CD4+TC count and viral load: (i) 2 elite controllers (ECs), (ii) 7 viremia controllers (VCs) and (iii) 21 nonviremia controllers (NVCs). Nested PCR was employed to amplify the virus genome, which was later sequenced using the Ion PGM platform for subtyping and analysis of immune escape mutations. Results: Viral samples were classified as HIV-1 subtypes B and F. Greater selection pressure on mutations was observed in the group of viremia controllers, with a higher frequency of immunological escape mutations in the genes investigated, including two new mutations in gag. The viral sequences of viremia controllers and nonviremia controllers did not differ significantly regarding the presence of immune escape mutations. Conclusion: The results suggest that progression to AIDS is not dependent on a single variable but rather on a set of characteristics and pressures exerted by virus biology and interactions with immunogenetic host factors.
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spelling Gomes, Samara Tatielle MonteiroAmoras, Ednelza da Silva GraçaGomes, Érica RibeiroQueiroz, Maria Alice FreitasSousa Júnior, Edivaldo CostaMassafra, Janaína Mota de VasconcelosLemos, Poliana da SilvaVianez Júnior, João Lídio da Silva GonçalvesVallinoto, Antonio Carlos Rosário2020-08-03T18:23:22Z2020-08-03T18:23:22Z2020GOMES, Samara Tatielle Monteiro et al. Immune escape mutations in HIV-1 controllers in the Brazilian Amazon region. BMC Infectious Diseases, v. 20, n. 546, p. 1-11, July 2020.1471-2334https://patua.iec.gov.br/handle/iec/414210.1186/s12879-020-05268-0.Background: Human immunodeficiency virus (HIV-1) infection is characterized by high viral replication and a decrease in CD4+ T cells (CD4+TC), resulting in AIDS, which can lead to death. In elite controllers and viremia controllers, viral replication is naturally controlled, with maintenance of CD4+TC levels without the use of antiretroviral therapy (ART). Methods: The aim of the present study was to describe virological and immunological risk factors among HIV-1-infected individuals according to characteristics of progression to AIDS. The sample included 30 treatment-naive patients classified into three groups based on infection duration (> 6 years), CD4+TC count and viral load: (i) 2 elite controllers (ECs), (ii) 7 viremia controllers (VCs) and (iii) 21 nonviremia controllers (NVCs). Nested PCR was employed to amplify the virus genome, which was later sequenced using the Ion PGM platform for subtyping and analysis of immune escape mutations. Results: Viral samples were classified as HIV-1 subtypes B and F. Greater selection pressure on mutations was observed in the group of viremia controllers, with a higher frequency of immunological escape mutations in the genes investigated, including two new mutations in gag. The viral sequences of viremia controllers and nonviremia controllers did not differ significantly regarding the presence of immune escape mutations. Conclusion: The results suggest that progression to AIDS is not dependent on a single variable but rather on a set of characteristics and pressures exerted by virus biology and interactions with immunogenetic host factors.This work was supported by grants from the Conselho Nacional de Desenvolvimento Científico e Tecnológico – CNPq (#301869/2017–0), Fundação Amazônia Paraense de Amparo a Estudos e Pesquisas (FAPESPA/ PRONEX-2015) and Universidade Federal do Pará (PAPQ/2019).Federal University of Pará. Biological Science Institute. Laboratory of Virology. Ananindeua, PA, Brazil / Federal University of Pará. Biological Science Institute. Graduate Program in Biology of Infectious and Parasitic Agents. Ananindeua, PA, Brazil.Federal University of Pará. Biological Science Institute. Laboratory of Virology. Ananindeua, PA, Brazil.Federal University of Pará. Biological Science Institute. Laboratory of Virology. Ananindeua, PA, Brazil.Federal University of Pará. Biological Science Institute. Laboratory of Virology. Ananindeua, PA, Brazil.Ministério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Ananindeua, PA, Brasil.Ministério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Ananindeua, PA, Brasil.Ministério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Ananindeua, PA, Brasil.Ministério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Ananindeua, PA, Brasil.Federal University of Pará. Biological Science Institute. Laboratory of Virology. Ananindeua, PA, Brazil.Federal University of Pará. Biological Science Institute. Laboratory of Virology. 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dc.title.pt_BR.fl_str_mv Immune escape mutations in HIV-1 controllers in the Brazilian Amazon region
title Immune escape mutations in HIV-1 controllers in the Brazilian Amazon region
spellingShingle Immune escape mutations in HIV-1 controllers in the Brazilian Amazon region
Gomes, Samara Tatielle Monteiro
HIV-1 / ultraestrutura
Linfócitos T / imunologia
Viremia
Mutação
title_short Immune escape mutations in HIV-1 controllers in the Brazilian Amazon region
title_full Immune escape mutations in HIV-1 controllers in the Brazilian Amazon region
title_fullStr Immune escape mutations in HIV-1 controllers in the Brazilian Amazon region
title_full_unstemmed Immune escape mutations in HIV-1 controllers in the Brazilian Amazon region
title_sort Immune escape mutations in HIV-1 controllers in the Brazilian Amazon region
author Gomes, Samara Tatielle Monteiro
author_facet Gomes, Samara Tatielle Monteiro
Amoras, Ednelza da Silva Graça
Gomes, Érica Ribeiro
Queiroz, Maria Alice Freitas
Sousa Júnior, Edivaldo Costa
Massafra, Janaína Mota de Vasconcelos
Lemos, Poliana da Silva
Vianez Júnior, João Lídio da Silva Gonçalves
Vallinoto, Antonio Carlos Rosário
author_role author
author2 Amoras, Ednelza da Silva Graça
Gomes, Érica Ribeiro
Queiroz, Maria Alice Freitas
Sousa Júnior, Edivaldo Costa
Massafra, Janaína Mota de Vasconcelos
Lemos, Poliana da Silva
Vianez Júnior, João Lídio da Silva Gonçalves
Vallinoto, Antonio Carlos Rosário
author2_role author
author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Gomes, Samara Tatielle Monteiro
Amoras, Ednelza da Silva Graça
Gomes, Érica Ribeiro
Queiroz, Maria Alice Freitas
Sousa Júnior, Edivaldo Costa
Massafra, Janaína Mota de Vasconcelos
Lemos, Poliana da Silva
Vianez Júnior, João Lídio da Silva Gonçalves
Vallinoto, Antonio Carlos Rosário
dc.subject.decsPrimary.pt_BR.fl_str_mv HIV-1 / ultraestrutura
Linfócitos T / imunologia
Viremia
Mutação
topic HIV-1 / ultraestrutura
Linfócitos T / imunologia
Viremia
Mutação
description Background: Human immunodeficiency virus (HIV-1) infection is characterized by high viral replication and a decrease in CD4+ T cells (CD4+TC), resulting in AIDS, which can lead to death. In elite controllers and viremia controllers, viral replication is naturally controlled, with maintenance of CD4+TC levels without the use of antiretroviral therapy (ART). Methods: The aim of the present study was to describe virological and immunological risk factors among HIV-1-infected individuals according to characteristics of progression to AIDS. The sample included 30 treatment-naive patients classified into three groups based on infection duration (> 6 years), CD4+TC count and viral load: (i) 2 elite controllers (ECs), (ii) 7 viremia controllers (VCs) and (iii) 21 nonviremia controllers (NVCs). Nested PCR was employed to amplify the virus genome, which was later sequenced using the Ion PGM platform for subtyping and analysis of immune escape mutations. Results: Viral samples were classified as HIV-1 subtypes B and F. Greater selection pressure on mutations was observed in the group of viremia controllers, with a higher frequency of immunological escape mutations in the genes investigated, including two new mutations in gag. The viral sequences of viremia controllers and nonviremia controllers did not differ significantly regarding the presence of immune escape mutations. Conclusion: The results suggest that progression to AIDS is not dependent on a single variable but rather on a set of characteristics and pressures exerted by virus biology and interactions with immunogenetic host factors.
publishDate 2020
dc.date.accessioned.fl_str_mv 2020-08-03T18:23:22Z
dc.date.available.fl_str_mv 2020-08-03T18:23:22Z
dc.date.issued.fl_str_mv 2020
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
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dc.identifier.citation.fl_str_mv GOMES, Samara Tatielle Monteiro et al. Immune escape mutations in HIV-1 controllers in the Brazilian Amazon region. BMC Infectious Diseases, v. 20, n. 546, p. 1-11, July 2020.
dc.identifier.uri.fl_str_mv https://patua.iec.gov.br/handle/iec/4142
dc.identifier.issn.-.fl_str_mv 1471-2334
dc.identifier.doi.-.fl_str_mv 10.1186/s12879-020-05268-0.
identifier_str_mv GOMES, Samara Tatielle Monteiro et al. Immune escape mutations in HIV-1 controllers in the Brazilian Amazon region. BMC Infectious Diseases, v. 20, n. 546, p. 1-11, July 2020.
1471-2334
10.1186/s12879-020-05268-0.
url https://patua.iec.gov.br/handle/iec/4142
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