MOLECULAR TYPING OF Candida albicans ISOLATES FROM HOSPITALIZED PATIENTS

Detalhes bibliográficos
Autor(a) principal: Bonfim-Mendonca, Patricia de Souza
Data de Publicação: 2013
Outros Autores: Fiorini, Adriana, Shinobu-Mesquita, Cristiane Suemi, Baeza, Lilian Cristiane, Fernandez, Maria Aparecida, Svidzinski, Terezinha Inez Estivalet
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Revista do Instituto de Medicina Tropical de São Paulo
Texto Completo: https://www.revistas.usp.br/rimtsp/article/view/78678
Resumo: SUMMARY Introduction: The majority of nosocomial fungal infections are caused by Candida spp. where C. albicans is the species most commonly identified. Molecular methods are important tools for assessing the origin of the yeasts isolated in hospitals. Methods: This is a study on the genetic profifiles of 39 nosocomial clinical isolates of C. albicans using two typing methods: random amplifified polymorphic DNA (RAPD) and microsatellite, two different primers for each technique were used. Results: RAPD provided 10 and 11 different profiles with values for SAB of 0.84 ± 0.126 and 0.88 ± 0.08 for primers M2 and P4, respectively. Microsatellite using two markers, CDC3 and HIS3, allowed the observation of six and seven different alleles, respectively, with combined discriminatory power of 0.91. Conclusions: Although genetic variability is clear, it was possible to identify high similarity, suggesting a common origin for at least a part of isolates. It is important to emphasize that common origin was proven from yeasts isolated from colonization (urine, catheter or endotracheal secretions) and blood culture from the same patient, indicating that the candidemia must have started from a site of colonization. The combination of RAPD and microsatellite provides a quick and efficient analysis for investigation of similarity among nosocomial isolates of C. albicans.
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spelling MOLECULAR TYPING OF Candida albicans ISOLATES FROM HOSPITALIZED PATIENTS Tipagem molecular de Candida albicans isoladas de pacientes hospitalizados SUMMARY Introduction: The majority of nosocomial fungal infections are caused by Candida spp. where C. albicans is the species most commonly identified. Molecular methods are important tools for assessing the origin of the yeasts isolated in hospitals. Methods: This is a study on the genetic profifiles of 39 nosocomial clinical isolates of C. albicans using two typing methods: random amplifified polymorphic DNA (RAPD) and microsatellite, two different primers for each technique were used. Results: RAPD provided 10 and 11 different profiles with values for SAB of 0.84 ± 0.126 and 0.88 ± 0.08 for primers M2 and P4, respectively. Microsatellite using two markers, CDC3 and HIS3, allowed the observation of six and seven different alleles, respectively, with combined discriminatory power of 0.91. Conclusions: Although genetic variability is clear, it was possible to identify high similarity, suggesting a common origin for at least a part of isolates. It is important to emphasize that common origin was proven from yeasts isolated from colonization (urine, catheter or endotracheal secretions) and blood culture from the same patient, indicating that the candidemia must have started from a site of colonization. The combination of RAPD and microsatellite provides a quick and efficient analysis for investigation of similarity among nosocomial isolates of C. albicans. RESUMO Introdução: A maioria das infecções fúngicas hospitalares são causadas por Candida spp. e C. albicans é a espécie mais comumente identificada. Métodos moleculares são ferramentas importantes para a avaliação da origem das leveduras isoladas em hospitais. Métodos: Este é um estudo sobre o perfil genético de 39 isolados clínicos nosocomiais de C. albicans através das técnicas de RAPD e microssatélite, foram usados dois diferentes iniciadores para cada técnica. Resultados: RAPD forneceu 10 e 11 diferentes perfis com valores de SAB 0,84 ± 0,126 e 0,88 ± 0,08 para os primers M2 e P4, respectivamente. A análise de microssatélites, usando os marcadores CDC3 e HIS3 permitiu a observação de seis e sete diferentes alelos respectivamente, com poder discriminatório combinado de 0,91. Conclusões: Embora seja clara a variabilidade genética, foi possível identificar alta similaridade, sugerindo origem comum para pelo menos parte deles. É importante enfatizar que foi comprovada origem comum de leveduras isoladas de colonização (urina, cateter ou secreção orotraqueal) e hemocultura do mesmo paciente, indicando que a candidemia deve ter iniciado a partir de um sítio de colonização. A combinação das técnicas RAPD e microssatélites fornece uma análise rápida e eficiente para investigação de similaridade entre isolados nosocomiais de C. albicans. Universidade de São Paulo. Instituto de Medicina Tropical de São Paulo2013-12-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionapplication/pdfhttps://www.revistas.usp.br/rimtsp/article/view/78678Revista do Instituto de Medicina Tropical de São Paulo; Vol. 55 No. 6 (2013); 385-391Revista do Instituto de Medicina Tropical de São Paulo; Vol. 55 Núm. 6 (2013); 385-391Revista do Instituto de Medicina Tropical de São Paulo; v. 55 n. 6 (2013); 385-3911678-99460036-4665reponame:Revista do Instituto de Medicina Tropical de São Pauloinstname:Instituto de Medicina Tropical (IMT)instacron:IMTenghttps://www.revistas.usp.br/rimtsp/article/view/78678/82730Copyright (c) 2018 Revista do Instituto de Medicina Tropical de São Pauloinfo:eu-repo/semantics/openAccessBonfim-Mendonca, Patricia de Souza Fiorini, Adriana Shinobu-Mesquita, Cristiane Suemi Baeza, Lilian Cristiane Fernandez, Maria Aparecida Svidzinski, Terezinha Inez Estivalet 2014-04-03T18:01:14Zoai:revistas.usp.br:article/78678Revistahttp://www.revistas.usp.br/rimtsp/indexPUBhttps://www.revistas.usp.br/rimtsp/oai||revimtsp@usp.br1678-99460036-4665opendoar:2022-12-13T16:52:15.055204Revista do Instituto de Medicina Tropical de São Paulo - Instituto de Medicina Tropical (IMT)true
dc.title.none.fl_str_mv MOLECULAR TYPING OF Candida albicans ISOLATES FROM HOSPITALIZED PATIENTS
Tipagem molecular de Candida albicans isoladas de pacientes hospitalizados
title MOLECULAR TYPING OF Candida albicans ISOLATES FROM HOSPITALIZED PATIENTS
spellingShingle MOLECULAR TYPING OF Candida albicans ISOLATES FROM HOSPITALIZED PATIENTS
Bonfim-Mendonca, Patricia de Souza
title_short MOLECULAR TYPING OF Candida albicans ISOLATES FROM HOSPITALIZED PATIENTS
title_full MOLECULAR TYPING OF Candida albicans ISOLATES FROM HOSPITALIZED PATIENTS
title_fullStr MOLECULAR TYPING OF Candida albicans ISOLATES FROM HOSPITALIZED PATIENTS
title_full_unstemmed MOLECULAR TYPING OF Candida albicans ISOLATES FROM HOSPITALIZED PATIENTS
title_sort MOLECULAR TYPING OF Candida albicans ISOLATES FROM HOSPITALIZED PATIENTS
author Bonfim-Mendonca, Patricia de Souza
author_facet Bonfim-Mendonca, Patricia de Souza
Fiorini, Adriana
Shinobu-Mesquita, Cristiane Suemi
Baeza, Lilian Cristiane
Fernandez, Maria Aparecida
Svidzinski, Terezinha Inez Estivalet
author_role author
author2 Fiorini, Adriana
Shinobu-Mesquita, Cristiane Suemi
Baeza, Lilian Cristiane
Fernandez, Maria Aparecida
Svidzinski, Terezinha Inez Estivalet
author2_role author
author
author
author
author
dc.contributor.author.fl_str_mv Bonfim-Mendonca, Patricia de Souza
Fiorini, Adriana
Shinobu-Mesquita, Cristiane Suemi
Baeza, Lilian Cristiane
Fernandez, Maria Aparecida
Svidzinski, Terezinha Inez Estivalet
description SUMMARY Introduction: The majority of nosocomial fungal infections are caused by Candida spp. where C. albicans is the species most commonly identified. Molecular methods are important tools for assessing the origin of the yeasts isolated in hospitals. Methods: This is a study on the genetic profifiles of 39 nosocomial clinical isolates of C. albicans using two typing methods: random amplifified polymorphic DNA (RAPD) and microsatellite, two different primers for each technique were used. Results: RAPD provided 10 and 11 different profiles with values for SAB of 0.84 ± 0.126 and 0.88 ± 0.08 for primers M2 and P4, respectively. Microsatellite using two markers, CDC3 and HIS3, allowed the observation of six and seven different alleles, respectively, with combined discriminatory power of 0.91. Conclusions: Although genetic variability is clear, it was possible to identify high similarity, suggesting a common origin for at least a part of isolates. It is important to emphasize that common origin was proven from yeasts isolated from colonization (urine, catheter or endotracheal secretions) and blood culture from the same patient, indicating that the candidemia must have started from a site of colonization. The combination of RAPD and microsatellite provides a quick and efficient analysis for investigation of similarity among nosocomial isolates of C. albicans.
publishDate 2013
dc.date.none.fl_str_mv 2013-12-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
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dc.identifier.uri.fl_str_mv https://www.revistas.usp.br/rimtsp/article/view/78678
url https://www.revistas.usp.br/rimtsp/article/view/78678
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv https://www.revistas.usp.br/rimtsp/article/view/78678/82730
dc.rights.driver.fl_str_mv Copyright (c) 2018 Revista do Instituto de Medicina Tropical de São Paulo
info:eu-repo/semantics/openAccess
rights_invalid_str_mv Copyright (c) 2018 Revista do Instituto de Medicina Tropical de São Paulo
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Universidade de São Paulo. Instituto de Medicina Tropical de São Paulo
publisher.none.fl_str_mv Universidade de São Paulo. Instituto de Medicina Tropical de São Paulo
dc.source.none.fl_str_mv Revista do Instituto de Medicina Tropical de São Paulo; Vol. 55 No. 6 (2013); 385-391
Revista do Instituto de Medicina Tropical de São Paulo; Vol. 55 Núm. 6 (2013); 385-391
Revista do Instituto de Medicina Tropical de São Paulo; v. 55 n. 6 (2013); 385-391
1678-9946
0036-4665
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repository.name.fl_str_mv Revista do Instituto de Medicina Tropical de São Paulo - Instituto de Medicina Tropical (IMT)
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