Structural, vibrational, and electronic properties of the glucoalkaloid strictosidine: A combined experimental and theoretical study

Detalhes bibliográficos
Autor(a) principal: Costa, Renyer Alves
Data de Publicação: 2016
Outros Autores: Pinheiro, Maria Lúcia Belém, Oliveira, Kelson Mota Teixeira de, Barison, Andersson, Salomé, Kahlil Schwanka, Iank, Júlio Rodolfo, Silva, Noam Gadelha da, Cabral, Tiara Sousa, Costa, Emmanoel Vilaca?
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional do INPA
Texto Completo: https://repositorio.inpa.gov.br/handle/1/15858
Resumo: A detailed structural analysis and spectral behavior of the glucoalkaloid strictosidine, a precursor of all monoterpene indole alkaloids, are discussed. The experimental NMR, FTIR, and UV results were compared to the theoretical DFT spectra calculated by Becke using the three-parameter Lee-Yang-Parr (B3LYP) function with 6-31G(d) and 6-311++G(2d,p) basis sets. The theoretical geometry optimization data were compared with the X-ray data for precursors and similar structures in the associated literature. The similarity between the theoretical and experimental coupling constants values made it possible to affirm the values of dihedral angles and their configuration, reinforcing findings from previous stereochemical studies. Theoretical UV analysis agreed well with the measured experimental data, with bands assigned. Calculated HOMO/LUMO gaps show low excitation energy for strictosidine, justifying its stability and reaction kinetics. The molecular electrostatic potential map shows opposite potentials regions that form hydrogen bonds that stabilize the dimeric form, which were confirmed by excellent agreement of the dimeric form theoretical wavenumbers with the experimental IR spectrum. ESI-MS/MS data revealed patterns for the fragmentation of the protonated strictosidine molecule outlined by an NBO study. © 2016 Renyer Alves Costa et al.
id INPA-2_7dff48dfc84efa749fce2590220a434a
oai_identifier_str oai:repositorio:1/15858
network_acronym_str INPA-2
network_name_str Repositório Institucional do INPA
repository_id_str
spelling Costa, Renyer AlvesPinheiro, Maria Lúcia BelémOliveira, Kelson Mota Teixeira deBarison, AnderssonSalomé, Kahlil SchwankaIank, Júlio RodolfoSilva, Noam Gadelha daCabral, Tiara SousaCosta, Emmanoel Vilaca?2020-05-19T19:58:41Z2020-05-19T19:58:41Z2016https://repositorio.inpa.gov.br/handle/1/1585810.1155/2016/1752429A detailed structural analysis and spectral behavior of the glucoalkaloid strictosidine, a precursor of all monoterpene indole alkaloids, are discussed. The experimental NMR, FTIR, and UV results were compared to the theoretical DFT spectra calculated by Becke using the three-parameter Lee-Yang-Parr (B3LYP) function with 6-31G(d) and 6-311++G(2d,p) basis sets. The theoretical geometry optimization data were compared with the X-ray data for precursors and similar structures in the associated literature. The similarity between the theoretical and experimental coupling constants values made it possible to affirm the values of dihedral angles and their configuration, reinforcing findings from previous stereochemical studies. Theoretical UV analysis agreed well with the measured experimental data, with bands assigned. Calculated HOMO/LUMO gaps show low excitation energy for strictosidine, justifying its stability and reaction kinetics. The molecular electrostatic potential map shows opposite potentials regions that form hydrogen bonds that stabilize the dimeric form, which were confirmed by excellent agreement of the dimeric form theoretical wavenumbers with the experimental IR spectrum. ESI-MS/MS data revealed patterns for the fragmentation of the protonated strictosidine molecule outlined by an NBO study. © 2016 Renyer Alves Costa et al.Volume 2016Attribution-NonCommercial-NoDerivs 3.0 Brazilhttp://creativecommons.org/licenses/by-nc-nd/3.0/br/info:eu-repo/semantics/openAccessStructural, vibrational, and electronic properties of the glucoalkaloid strictosidine: A combined experimental and theoretical studyinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleJournal of Chemistryengreponame:Repositório Institucional do INPAinstname:Instituto Nacional de Pesquisas da Amazônia (INPA)instacron:INPAORIGINALartigo-inpa.pdfartigo-inpa.pdfapplication/pdf3238352https://repositorio.inpa.gov.br/bitstream/1/15858/1/artigo-inpa.pdfdd3f12ddb98a6a84288d07fe34620565MD511/158582020-05-19 16:16:38.576oai:repositorio:1/15858Repositório de PublicaçõesPUBhttps://repositorio.inpa.gov.br/oai/requestopendoar:2020-05-19T20:16:38Repositório Institucional do INPA - Instituto Nacional de Pesquisas da Amazônia (INPA)false
dc.title.en.fl_str_mv Structural, vibrational, and electronic properties of the glucoalkaloid strictosidine: A combined experimental and theoretical study
title Structural, vibrational, and electronic properties of the glucoalkaloid strictosidine: A combined experimental and theoretical study
spellingShingle Structural, vibrational, and electronic properties of the glucoalkaloid strictosidine: A combined experimental and theoretical study
Costa, Renyer Alves
title_short Structural, vibrational, and electronic properties of the glucoalkaloid strictosidine: A combined experimental and theoretical study
title_full Structural, vibrational, and electronic properties of the glucoalkaloid strictosidine: A combined experimental and theoretical study
title_fullStr Structural, vibrational, and electronic properties of the glucoalkaloid strictosidine: A combined experimental and theoretical study
title_full_unstemmed Structural, vibrational, and electronic properties of the glucoalkaloid strictosidine: A combined experimental and theoretical study
title_sort Structural, vibrational, and electronic properties of the glucoalkaloid strictosidine: A combined experimental and theoretical study
author Costa, Renyer Alves
author_facet Costa, Renyer Alves
Pinheiro, Maria Lúcia Belém
Oliveira, Kelson Mota Teixeira de
Barison, Andersson
Salomé, Kahlil Schwanka
Iank, Júlio Rodolfo
Silva, Noam Gadelha da
Cabral, Tiara Sousa
Costa, Emmanoel Vilaca?
author_role author
author2 Pinheiro, Maria Lúcia Belém
Oliveira, Kelson Mota Teixeira de
Barison, Andersson
Salomé, Kahlil Schwanka
Iank, Júlio Rodolfo
Silva, Noam Gadelha da
Cabral, Tiara Sousa
Costa, Emmanoel Vilaca?
author2_role author
author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Costa, Renyer Alves
Pinheiro, Maria Lúcia Belém
Oliveira, Kelson Mota Teixeira de
Barison, Andersson
Salomé, Kahlil Schwanka
Iank, Júlio Rodolfo
Silva, Noam Gadelha da
Cabral, Tiara Sousa
Costa, Emmanoel Vilaca?
description A detailed structural analysis and spectral behavior of the glucoalkaloid strictosidine, a precursor of all monoterpene indole alkaloids, are discussed. The experimental NMR, FTIR, and UV results were compared to the theoretical DFT spectra calculated by Becke using the three-parameter Lee-Yang-Parr (B3LYP) function with 6-31G(d) and 6-311++G(2d,p) basis sets. The theoretical geometry optimization data were compared with the X-ray data for precursors and similar structures in the associated literature. The similarity between the theoretical and experimental coupling constants values made it possible to affirm the values of dihedral angles and their configuration, reinforcing findings from previous stereochemical studies. Theoretical UV analysis agreed well with the measured experimental data, with bands assigned. Calculated HOMO/LUMO gaps show low excitation energy for strictosidine, justifying its stability and reaction kinetics. The molecular electrostatic potential map shows opposite potentials regions that form hydrogen bonds that stabilize the dimeric form, which were confirmed by excellent agreement of the dimeric form theoretical wavenumbers with the experimental IR spectrum. ESI-MS/MS data revealed patterns for the fragmentation of the protonated strictosidine molecule outlined by an NBO study. © 2016 Renyer Alves Costa et al.
publishDate 2016
dc.date.issued.fl_str_mv 2016
dc.date.accessioned.fl_str_mv 2020-05-19T19:58:41Z
dc.date.available.fl_str_mv 2020-05-19T19:58:41Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv https://repositorio.inpa.gov.br/handle/1/15858
dc.identifier.doi.none.fl_str_mv 10.1155/2016/1752429
url https://repositorio.inpa.gov.br/handle/1/15858
identifier_str_mv 10.1155/2016/1752429
dc.language.iso.fl_str_mv eng
language eng
dc.relation.ispartof.pt_BR.fl_str_mv Volume 2016
dc.rights.driver.fl_str_mv Attribution-NonCommercial-NoDerivs 3.0 Brazil
http://creativecommons.org/licenses/by-nc-nd/3.0/br/
info:eu-repo/semantics/openAccess
rights_invalid_str_mv Attribution-NonCommercial-NoDerivs 3.0 Brazil
http://creativecommons.org/licenses/by-nc-nd/3.0/br/
eu_rights_str_mv openAccess
dc.publisher.none.fl_str_mv Journal of Chemistry
publisher.none.fl_str_mv Journal of Chemistry
dc.source.none.fl_str_mv reponame:Repositório Institucional do INPA
instname:Instituto Nacional de Pesquisas da Amazônia (INPA)
instacron:INPA
instname_str Instituto Nacional de Pesquisas da Amazônia (INPA)
instacron_str INPA
institution INPA
reponame_str Repositório Institucional do INPA
collection Repositório Institucional do INPA
bitstream.url.fl_str_mv https://repositorio.inpa.gov.br/bitstream/1/15858/1/artigo-inpa.pdf
bitstream.checksum.fl_str_mv dd3f12ddb98a6a84288d07fe34620565
bitstream.checksumAlgorithm.fl_str_mv MD5
repository.name.fl_str_mv Repositório Institucional do INPA - Instituto Nacional de Pesquisas da Amazônia (INPA)
repository.mail.fl_str_mv
_version_ 1797064412854484992