Urinary volatilomics unveils a candidate biomarker panel for noninvasive detection of clear cell renal cell carcinoma

Detalhes bibliográficos
Autor(a) principal: Pinto, Joana
Data de Publicação: 2021
Outros Autores: Amaro, Filipa, Lima, Ana Rita, Carvalho-Maia, Carina, Jerónimo, Carmen, Henrique, Rui, Bastos, Maria de Lourdes, Carvalho, Márcia, Guedes de Pinho, Paula
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10284/9977
Resumo: Clear cell renal cell carcinoma (ccRCC) is the most common type of kidney cancer usually associated with asymptomatic development and risk of systemic progression. Hence, reliable molecular biomarkers of ccRCC are needed to provide early and minimally invasive detection. In this study, urinary volatilome profiling of patients diagnosed with ccRCC (n = 75), and cancer-free controls (n = 75), was performed to investigate the presence of a volatile signature characteristic of ccRCC. Volatile organic compounds (VOCs) in general, and more specifically volatile carbonyl compounds (VCCs), present in urine were extracted by headspace solid-phase microextraction coupled with gas chromatography-mass spectrometry (HS-SPME-GC-MS). Supervised multivariate models showed a good discriminatory power of ccRCC patients from controls in urine. Overall, 22 volatile metabolites were found significantly altered between the two groups, including aldehydes, ketones, aromatic hydrocarbons, and terpenoids. A candidate six-biomarker panel, comprising octanal, 3-methylbutanal, benzaldehyde, 2-furaldehyde, 4-heptanone, and p-cresol, depicted the best performance for ccRCC detection with 83% sensitivity, 79% specificity, and 81% accuracy. Moreover, the ccRCC urinary volatilome signature suggested dysregulation of energy metabolism and overexpression of enzymes associated with carcinogenesis. These findings provide the molecular basis for the fine-tuning of gas-sensing materials for application in the development of a bioelectronic sensor.
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spelling Urinary volatilomics unveils a candidate biomarker panel for noninvasive detection of clear cell renal cell carcinomaClear cell renal cell carcinomaDiagnostic biomarkersUrineVolatilomeGas chromatography - mass spectrometryClear cell renal cell carcinoma (ccRCC) is the most common type of kidney cancer usually associated with asymptomatic development and risk of systemic progression. Hence, reliable molecular biomarkers of ccRCC are needed to provide early and minimally invasive detection. In this study, urinary volatilome profiling of patients diagnosed with ccRCC (n = 75), and cancer-free controls (n = 75), was performed to investigate the presence of a volatile signature characteristic of ccRCC. Volatile organic compounds (VOCs) in general, and more specifically volatile carbonyl compounds (VCCs), present in urine were extracted by headspace solid-phase microextraction coupled with gas chromatography-mass spectrometry (HS-SPME-GC-MS). Supervised multivariate models showed a good discriminatory power of ccRCC patients from controls in urine. Overall, 22 volatile metabolites were found significantly altered between the two groups, including aldehydes, ketones, aromatic hydrocarbons, and terpenoids. A candidate six-biomarker panel, comprising octanal, 3-methylbutanal, benzaldehyde, 2-furaldehyde, 4-heptanone, and p-cresol, depicted the best performance for ccRCC detection with 83% sensitivity, 79% specificity, and 81% accuracy. Moreover, the ccRCC urinary volatilome signature suggested dysregulation of energy metabolism and overexpression of enzymes associated with carcinogenesis. These findings provide the molecular basis for the fine-tuning of gas-sensing materials for application in the development of a bioelectronic sensor.ACS PublicationsRepositório Institucional da Universidade Fernando PessoaPinto, JoanaAmaro, FilipaLima, Ana RitaCarvalho-Maia, CarinaJerónimo, CarmenHenrique, RuiBastos, Maria de LourdesCarvalho, MárciaGuedes de Pinho, Paula2021-06-30T09:42:37Z2021-01-01T00:00:00Z2021-01-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10284/9977eng1535-389310.1021/acs.jproteome.0c009361535-3907metadata only accessinfo:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2022-09-06T02:09:16Zoai:bdigital.ufp.pt:10284/9977Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T15:46:45.385962Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Urinary volatilomics unveils a candidate biomarker panel for noninvasive detection of clear cell renal cell carcinoma
title Urinary volatilomics unveils a candidate biomarker panel for noninvasive detection of clear cell renal cell carcinoma
spellingShingle Urinary volatilomics unveils a candidate biomarker panel for noninvasive detection of clear cell renal cell carcinoma
Pinto, Joana
Clear cell renal cell carcinoma
Diagnostic biomarkers
Urine
Volatilome
Gas chromatography - mass spectrometry
title_short Urinary volatilomics unveils a candidate biomarker panel for noninvasive detection of clear cell renal cell carcinoma
title_full Urinary volatilomics unveils a candidate biomarker panel for noninvasive detection of clear cell renal cell carcinoma
title_fullStr Urinary volatilomics unveils a candidate biomarker panel for noninvasive detection of clear cell renal cell carcinoma
title_full_unstemmed Urinary volatilomics unveils a candidate biomarker panel for noninvasive detection of clear cell renal cell carcinoma
title_sort Urinary volatilomics unveils a candidate biomarker panel for noninvasive detection of clear cell renal cell carcinoma
author Pinto, Joana
author_facet Pinto, Joana
Amaro, Filipa
Lima, Ana Rita
Carvalho-Maia, Carina
Jerónimo, Carmen
Henrique, Rui
Bastos, Maria de Lourdes
Carvalho, Márcia
Guedes de Pinho, Paula
author_role author
author2 Amaro, Filipa
Lima, Ana Rita
Carvalho-Maia, Carina
Jerónimo, Carmen
Henrique, Rui
Bastos, Maria de Lourdes
Carvalho, Márcia
Guedes de Pinho, Paula
author2_role author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Repositório Institucional da Universidade Fernando Pessoa
dc.contributor.author.fl_str_mv Pinto, Joana
Amaro, Filipa
Lima, Ana Rita
Carvalho-Maia, Carina
Jerónimo, Carmen
Henrique, Rui
Bastos, Maria de Lourdes
Carvalho, Márcia
Guedes de Pinho, Paula
dc.subject.por.fl_str_mv Clear cell renal cell carcinoma
Diagnostic biomarkers
Urine
Volatilome
Gas chromatography - mass spectrometry
topic Clear cell renal cell carcinoma
Diagnostic biomarkers
Urine
Volatilome
Gas chromatography - mass spectrometry
description Clear cell renal cell carcinoma (ccRCC) is the most common type of kidney cancer usually associated with asymptomatic development and risk of systemic progression. Hence, reliable molecular biomarkers of ccRCC are needed to provide early and minimally invasive detection. In this study, urinary volatilome profiling of patients diagnosed with ccRCC (n = 75), and cancer-free controls (n = 75), was performed to investigate the presence of a volatile signature characteristic of ccRCC. Volatile organic compounds (VOCs) in general, and more specifically volatile carbonyl compounds (VCCs), present in urine were extracted by headspace solid-phase microextraction coupled with gas chromatography-mass spectrometry (HS-SPME-GC-MS). Supervised multivariate models showed a good discriminatory power of ccRCC patients from controls in urine. Overall, 22 volatile metabolites were found significantly altered between the two groups, including aldehydes, ketones, aromatic hydrocarbons, and terpenoids. A candidate six-biomarker panel, comprising octanal, 3-methylbutanal, benzaldehyde, 2-furaldehyde, 4-heptanone, and p-cresol, depicted the best performance for ccRCC detection with 83% sensitivity, 79% specificity, and 81% accuracy. Moreover, the ccRCC urinary volatilome signature suggested dysregulation of energy metabolism and overexpression of enzymes associated with carcinogenesis. These findings provide the molecular basis for the fine-tuning of gas-sensing materials for application in the development of a bioelectronic sensor.
publishDate 2021
dc.date.none.fl_str_mv 2021-06-30T09:42:37Z
2021-01-01T00:00:00Z
2021-01-01T00:00:00Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
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status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/10284/9977
url http://hdl.handle.net/10284/9977
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 1535-3893
10.1021/acs.jproteome.0c00936
1535-3907
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dc.publisher.none.fl_str_mv ACS Publications
publisher.none.fl_str_mv ACS Publications
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
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instname_str Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
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reponame_str Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
collection Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
repository.name.fl_str_mv Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
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