Uncertainty in Ocean-Color Estimates of Chlorophyll for Phytoplankton Groups

Detalhes bibliográficos
Autor(a) principal: Brewin, Robert J. W.
Data de Publicação: 2017
Outros Autores: Ciavatta, Stefano, Sathyendranath, Shubha, Jackson, Thomas, Tilstone, Gavin, Curran, Kieran, Airs, Ruth L., Cummings, Denise, Brotas, Vanda, Organelli, Emanuele, Dall'Olmo, Giorgio, Raitsos, Dionysios E.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10451/41146
Resumo: Over the past decade, techniques have been presented to derive the community structure of phytoplankton at synoptic scales using satellite ocean-color data. There is a growing demand from the ecosystem modeling community to use these products for model evaluation and data assimilation. Yet, from the perspective of an ecosystem modeler these products are of limited use unless: (i) the phytoplankton products provided by the remote-sensing community match those required by the ecosystem modelers; and (ii) information on per-pixel uncertainty is provided to evaluate data quality. Using a large dataset collected in the North Atlantic, we re-tune a method to estimate the chlorophyll concentration of three phytoplankton groups, partitioned according to size [pico- (<2 μm), nano- (2–20 μm) and micro-phytoplankton (>20 μm)]. The method is modified to account for the influence of sea surface temperature, also available from satellite data, on model parameters and on the partitioning of microphytoplankton into diatoms and dinoflagellates, such that the phytoplankton groups provided match those simulated in a state of the art marine ecosystem model (the European Regional Seas Ecosystem Model, ERSEM). The method is validated using another dataset, independent of the data used to parameterize the method, of more than 800 satellite and in situ match-ups. Using fuzzy-logic techniques for deriving per-pixel uncertainty, developed within the ESA Ocean Colour Climate Change Initiative (OC-CCI), the match-up dataset is used to derive the root mean square error and the bias between in situ and satellite estimates of the chlorophyll for each phytoplankton group, for 14 different optical water types (OWT). These values are then used with satellite estimates of OWTs to map uncertainty in chlorophyll on a per pixel basis for each phytoplankton group. It is envisaged these satellite products will be useful for those working on the validation of, and assimilation of data into, marine ecosystem models that simulate different phytoplankton groups.
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spelling Uncertainty in Ocean-Color Estimates of Chlorophyll for Phytoplankton Groupsphytoplanktonsizefunctionchlorophyllocean-coloruncertaintyOver the past decade, techniques have been presented to derive the community structure of phytoplankton at synoptic scales using satellite ocean-color data. There is a growing demand from the ecosystem modeling community to use these products for model evaluation and data assimilation. Yet, from the perspective of an ecosystem modeler these products are of limited use unless: (i) the phytoplankton products provided by the remote-sensing community match those required by the ecosystem modelers; and (ii) information on per-pixel uncertainty is provided to evaluate data quality. Using a large dataset collected in the North Atlantic, we re-tune a method to estimate the chlorophyll concentration of three phytoplankton groups, partitioned according to size [pico- (<2 μm), nano- (2–20 μm) and micro-phytoplankton (>20 μm)]. The method is modified to account for the influence of sea surface temperature, also available from satellite data, on model parameters and on the partitioning of microphytoplankton into diatoms and dinoflagellates, such that the phytoplankton groups provided match those simulated in a state of the art marine ecosystem model (the European Regional Seas Ecosystem Model, ERSEM). The method is validated using another dataset, independent of the data used to parameterize the method, of more than 800 satellite and in situ match-ups. Using fuzzy-logic techniques for deriving per-pixel uncertainty, developed within the ESA Ocean Colour Climate Change Initiative (OC-CCI), the match-up dataset is used to derive the root mean square error and the bias between in situ and satellite estimates of the chlorophyll for each phytoplankton group, for 14 different optical water types (OWT). These values are then used with satellite estimates of OWTs to map uncertainty in chlorophyll on a per pixel basis for each phytoplankton group. It is envisaged these satellite products will be useful for those working on the validation of, and assimilation of data into, marine ecosystem models that simulate different phytoplankton groups.Frontiers MediaRepositório da Universidade de LisboaBrewin, Robert J. W.Ciavatta, StefanoSathyendranath, ShubhaJackson, ThomasTilstone, GavinCurran, KieranAirs, Ruth L.Cummings, DeniseBrotas, VandaOrganelli, EmanueleDall'Olmo, GiorgioRaitsos, Dionysios E.2020-01-19T20:09:21Z20172017-01-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10451/41146eng2296-774510.3389/fmars.2017.00104info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-11-08T16:37:44Zoai:repositorio.ul.pt:10451/41146Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T21:53:03.605793Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Uncertainty in Ocean-Color Estimates of Chlorophyll for Phytoplankton Groups
title Uncertainty in Ocean-Color Estimates of Chlorophyll for Phytoplankton Groups
spellingShingle Uncertainty in Ocean-Color Estimates of Chlorophyll for Phytoplankton Groups
Brewin, Robert J. W.
phytoplankton
size
function
chlorophyll
ocean-color
uncertainty
title_short Uncertainty in Ocean-Color Estimates of Chlorophyll for Phytoplankton Groups
title_full Uncertainty in Ocean-Color Estimates of Chlorophyll for Phytoplankton Groups
title_fullStr Uncertainty in Ocean-Color Estimates of Chlorophyll for Phytoplankton Groups
title_full_unstemmed Uncertainty in Ocean-Color Estimates of Chlorophyll for Phytoplankton Groups
title_sort Uncertainty in Ocean-Color Estimates of Chlorophyll for Phytoplankton Groups
author Brewin, Robert J. W.
author_facet Brewin, Robert J. W.
Ciavatta, Stefano
Sathyendranath, Shubha
Jackson, Thomas
Tilstone, Gavin
Curran, Kieran
Airs, Ruth L.
Cummings, Denise
Brotas, Vanda
Organelli, Emanuele
Dall'Olmo, Giorgio
Raitsos, Dionysios E.
author_role author
author2 Ciavatta, Stefano
Sathyendranath, Shubha
Jackson, Thomas
Tilstone, Gavin
Curran, Kieran
Airs, Ruth L.
Cummings, Denise
Brotas, Vanda
Organelli, Emanuele
Dall'Olmo, Giorgio
Raitsos, Dionysios E.
author2_role author
author
author
author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Repositório da Universidade de Lisboa
dc.contributor.author.fl_str_mv Brewin, Robert J. W.
Ciavatta, Stefano
Sathyendranath, Shubha
Jackson, Thomas
Tilstone, Gavin
Curran, Kieran
Airs, Ruth L.
Cummings, Denise
Brotas, Vanda
Organelli, Emanuele
Dall'Olmo, Giorgio
Raitsos, Dionysios E.
dc.subject.por.fl_str_mv phytoplankton
size
function
chlorophyll
ocean-color
uncertainty
topic phytoplankton
size
function
chlorophyll
ocean-color
uncertainty
description Over the past decade, techniques have been presented to derive the community structure of phytoplankton at synoptic scales using satellite ocean-color data. There is a growing demand from the ecosystem modeling community to use these products for model evaluation and data assimilation. Yet, from the perspective of an ecosystem modeler these products are of limited use unless: (i) the phytoplankton products provided by the remote-sensing community match those required by the ecosystem modelers; and (ii) information on per-pixel uncertainty is provided to evaluate data quality. Using a large dataset collected in the North Atlantic, we re-tune a method to estimate the chlorophyll concentration of three phytoplankton groups, partitioned according to size [pico- (<2 μm), nano- (2–20 μm) and micro-phytoplankton (>20 μm)]. The method is modified to account for the influence of sea surface temperature, also available from satellite data, on model parameters and on the partitioning of microphytoplankton into diatoms and dinoflagellates, such that the phytoplankton groups provided match those simulated in a state of the art marine ecosystem model (the European Regional Seas Ecosystem Model, ERSEM). The method is validated using another dataset, independent of the data used to parameterize the method, of more than 800 satellite and in situ match-ups. Using fuzzy-logic techniques for deriving per-pixel uncertainty, developed within the ESA Ocean Colour Climate Change Initiative (OC-CCI), the match-up dataset is used to derive the root mean square error and the bias between in situ and satellite estimates of the chlorophyll for each phytoplankton group, for 14 different optical water types (OWT). These values are then used with satellite estimates of OWTs to map uncertainty in chlorophyll on a per pixel basis for each phytoplankton group. It is envisaged these satellite products will be useful for those working on the validation of, and assimilation of data into, marine ecosystem models that simulate different phytoplankton groups.
publishDate 2017
dc.date.none.fl_str_mv 2017
2017-01-01T00:00:00Z
2020-01-19T20:09:21Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/10451/41146
url http://hdl.handle.net/10451/41146
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 2296-7745
10.3389/fmars.2017.00104
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Frontiers Media
publisher.none.fl_str_mv Frontiers Media
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
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collection Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
repository.name.fl_str_mv Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
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