Standardized CPUE of blue shark in the Portuguese pelagic longline fleet operating in the north Atlantic

Detalhes bibliográficos
Autor(a) principal: Coelho, Rui
Data de Publicação: 2016
Outros Autores: Santos, Miguel, Lino, Pedro
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10400.1/14883
Resumo: This working document analyzes the catch, effort and standardized CPUE trends for the north Atlantic blue shark captured by the Portuguese pelagic longline fleet. Nominal annual CPUE were calculated as kg/1000 hooks and were standardized with Generalized Linear Models (GLM) and Generalized Linear Mixed Models (GLMM) using year, quarter, area, gear type, targeting effects and area:quarter interactions as fixed factors, and year:area as random effects. Sensitivity analyzes were carried out for the model type (lognormal, tweedie, gamma or delta lognormal), the definition of targeting effects (based on ratios or cluster analysis), and definition of areas. Model goodness-of-fit and comparison was carried out with AIC and the pseudo coefficient of determination (R2 ), and model validation with a residual analysis. The final standardized CPUE trend shows a general increase over the studied period, between 1997 and 2014, with some inter-annual oscillations. This paper presents the first index of abundance for the blue shark estimated from captures from the Portuguese pelagic longline fleet in the North Atlantic, and can be used in future stock assessments models.
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spelling Standardized CPUE of blue shark in the Portuguese pelagic longline fleet operating in the north AtlanticBlue sharkPrionace glaucaCPUE standardizationNorth AtlanticCatch/effortLongline fisheriesFishery indicatorsGeneralized linear modelsGeneralized linear mixed modelsThis working document analyzes the catch, effort and standardized CPUE trends for the north Atlantic blue shark captured by the Portuguese pelagic longline fleet. Nominal annual CPUE were calculated as kg/1000 hooks and were standardized with Generalized Linear Models (GLM) and Generalized Linear Mixed Models (GLMM) using year, quarter, area, gear type, targeting effects and area:quarter interactions as fixed factors, and year:area as random effects. Sensitivity analyzes were carried out for the model type (lognormal, tweedie, gamma or delta lognormal), the definition of targeting effects (based on ratios or cluster analysis), and definition of areas. Model goodness-of-fit and comparison was carried out with AIC and the pseudo coefficient of determination (R2 ), and model validation with a residual analysis. The final standardized CPUE trend shows a general increase over the studied period, between 1997 and 2014, with some inter-annual oscillations. This paper presents the first index of abundance for the blue shark estimated from captures from the Portuguese pelagic longline fleet in the North Atlantic, and can be used in future stock assessments models.FCT IF/00253/2014ICCAT - International Commission for the Conservation of Atlantic TunasSapientiaCoelho, RuiSantos, MiguelLino, Pedro2020-12-04T11:50:27Z20162016-01-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10400.1/14883enginfo:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-07-24T10:27:13Zoai:sapientia.ualg.pt:10400.1/14883Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T20:05:49.880572Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Standardized CPUE of blue shark in the Portuguese pelagic longline fleet operating in the north Atlantic
title Standardized CPUE of blue shark in the Portuguese pelagic longline fleet operating in the north Atlantic
spellingShingle Standardized CPUE of blue shark in the Portuguese pelagic longline fleet operating in the north Atlantic
Coelho, Rui
Blue shark
Prionace glauca
CPUE standardization
North Atlantic
Catch/effort
Longline fisheries
Fishery indicators
Generalized linear models
Generalized linear mixed models
title_short Standardized CPUE of blue shark in the Portuguese pelagic longline fleet operating in the north Atlantic
title_full Standardized CPUE of blue shark in the Portuguese pelagic longline fleet operating in the north Atlantic
title_fullStr Standardized CPUE of blue shark in the Portuguese pelagic longline fleet operating in the north Atlantic
title_full_unstemmed Standardized CPUE of blue shark in the Portuguese pelagic longline fleet operating in the north Atlantic
title_sort Standardized CPUE of blue shark in the Portuguese pelagic longline fleet operating in the north Atlantic
author Coelho, Rui
author_facet Coelho, Rui
Santos, Miguel
Lino, Pedro
author_role author
author2 Santos, Miguel
Lino, Pedro
author2_role author
author
dc.contributor.none.fl_str_mv Sapientia
dc.contributor.author.fl_str_mv Coelho, Rui
Santos, Miguel
Lino, Pedro
dc.subject.por.fl_str_mv Blue shark
Prionace glauca
CPUE standardization
North Atlantic
Catch/effort
Longline fisheries
Fishery indicators
Generalized linear models
Generalized linear mixed models
topic Blue shark
Prionace glauca
CPUE standardization
North Atlantic
Catch/effort
Longline fisheries
Fishery indicators
Generalized linear models
Generalized linear mixed models
description This working document analyzes the catch, effort and standardized CPUE trends for the north Atlantic blue shark captured by the Portuguese pelagic longline fleet. Nominal annual CPUE were calculated as kg/1000 hooks and were standardized with Generalized Linear Models (GLM) and Generalized Linear Mixed Models (GLMM) using year, quarter, area, gear type, targeting effects and area:quarter interactions as fixed factors, and year:area as random effects. Sensitivity analyzes were carried out for the model type (lognormal, tweedie, gamma or delta lognormal), the definition of targeting effects (based on ratios or cluster analysis), and definition of areas. Model goodness-of-fit and comparison was carried out with AIC and the pseudo coefficient of determination (R2 ), and model validation with a residual analysis. The final standardized CPUE trend shows a general increase over the studied period, between 1997 and 2014, with some inter-annual oscillations. This paper presents the first index of abundance for the blue shark estimated from captures from the Portuguese pelagic longline fleet in the North Atlantic, and can be used in future stock assessments models.
publishDate 2016
dc.date.none.fl_str_mv 2016
2016-01-01T00:00:00Z
2020-12-04T11:50:27Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/10400.1/14883
url http://hdl.handle.net/10400.1/14883
dc.language.iso.fl_str_mv eng
language eng
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv ICCAT - International Commission for the Conservation of Atlantic Tunas
publisher.none.fl_str_mv ICCAT - International Commission for the Conservation of Atlantic Tunas
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron:RCAAP
instname_str Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron_str RCAAP
institution RCAAP
reponame_str Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
collection Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
repository.name.fl_str_mv Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
repository.mail.fl_str_mv
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