Germline mutations in MAP3K6 are associated with familial gastric cancer

Detalhes bibliográficos
Autor(a) principal: Gaston, D.
Data de Publicação: 2014
Outros Autores: Hansford, S., Oliveira, C., Nightingale, M., Pinheiro, H., Macgillivray, C., Kaurah, P., Rideout, A., Steele, P., Soares, G., Huang, W., Whitehouse, S., Blowers, S., LeBlanc, M., Jiang, H., Greer, W., Samuels, M., Orr, A., Fernandez, C., Majewski, J., Ludman, M., Dyack, S., Penney, L., McMaster, C., Huntsman, D., Bedard, K.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10400.16/1870
Resumo: Gastric cancer is among the leading causes of cancer-related deaths worldwide. While heritable forms of gastric cancer are relatively rare, identifying the genes responsible for such cases can inform diagnosis and treatment for both hereditary and sporadic cases of gastric cancer. Mutations in the E-cadherin gene, CDH1, account for 40% of the most common form of familial gastric cancer (FGC), hereditary diffuse gastric cancer (HDGC). The genes responsible for the remaining forms of FGC are currently unknown. Here we examined a large family from Maritime Canada with FGC without CDH1 mutations, and identified a germline coding variant (p.P946L) in mitogen-activated protein kinase kinase kinase 6 (MAP3K6). Based on conservation, predicted pathogenicity and a known role of the gene in cancer predisposition, MAP3K6 was considered a strong candidate and was investigated further. Screening of an additional 115 unrelated individuals with non-CDH1 FGC identified the p.P946L MAP3K6 variant, as well as four additional coding variants in MAP3K6 (p.F849Sfs*142, p.P958T, p.D200Y and p.V207G). A somatic second-hit variant (p.H506Y) was present in DNA obtained from one of the tumor specimens, and evidence of DNA hypermethylation within the MAP3K6 gene was observed in DNA from the tumor of another affected individual. These findings, together with previous evidence from mouse models that MAP3K6 acts as a tumor suppressor, and studies showing the presence of somatic mutations in MAP3K6 in non-hereditary gastric cancers and gastric cancer cell lines, point towards MAP3K6 variants as a predisposing factor for FGC.
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spelling Germline mutations in MAP3K6 are associated with familial gastric cancerGastric cancer is among the leading causes of cancer-related deaths worldwide. While heritable forms of gastric cancer are relatively rare, identifying the genes responsible for such cases can inform diagnosis and treatment for both hereditary and sporadic cases of gastric cancer. Mutations in the E-cadherin gene, CDH1, account for 40% of the most common form of familial gastric cancer (FGC), hereditary diffuse gastric cancer (HDGC). The genes responsible for the remaining forms of FGC are currently unknown. Here we examined a large family from Maritime Canada with FGC without CDH1 mutations, and identified a germline coding variant (p.P946L) in mitogen-activated protein kinase kinase kinase 6 (MAP3K6). Based on conservation, predicted pathogenicity and a known role of the gene in cancer predisposition, MAP3K6 was considered a strong candidate and was investigated further. Screening of an additional 115 unrelated individuals with non-CDH1 FGC identified the p.P946L MAP3K6 variant, as well as four additional coding variants in MAP3K6 (p.F849Sfs*142, p.P958T, p.D200Y and p.V207G). A somatic second-hit variant (p.H506Y) was present in DNA obtained from one of the tumor specimens, and evidence of DNA hypermethylation within the MAP3K6 gene was observed in DNA from the tumor of another affected individual. These findings, together with previous evidence from mouse models that MAP3K6 acts as a tumor suppressor, and studies showing the presence of somatic mutations in MAP3K6 in non-hereditary gastric cancers and gastric cancer cell lines, point towards MAP3K6 variants as a predisposing factor for FGC.The following agencies provided funding for this project: Genome Canada, Genome Atlantic, Nova Scotia Health Research Foundation, Nova Scotia Research and Innovation Trust, Dalhousie Faculty of Medicine, Dalhousie Department of Ophthalmology, Health Canada, The Centre for Drug Research and Development, Capital District Health Authority, IWK Health Centre Foundation, Capital Health Research Fund, and The COMPETE/FEDER Portuguese Foundation for Science and Technology (FCT), Projects Ref. FCT PTDC/SAU-GMG/110785/2009 and Post-doc grant SFRH/BPD/79499/2011 to HP “financiados no âmbito do Programa Operacional Temático Factores de Competitividade (COMPETE) e comparticipado pelo fundo Comunitário Europeu FEDER.” MES is supported by the CHU Ste-Justine Centre de Recherche. The authors would like to acknowledge the contribution of: the Genome Quebec High Throughput Sequencing Platform; and Sónia Sousa and José Carlos Machado from the IPATIMUP Diagnostics Unit, Porto, Portugal. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.Public Library of ScienceRepositório Científico do Centro Hospitalar Universitário de Santo AntónioGaston, D.Hansford, S.Oliveira, C.Nightingale, M.Pinheiro, H.Macgillivray, C.Kaurah, P.Rideout, A.Steele, P.Soares, G.Huang, W.Whitehouse, S.Blowers, S.LeBlanc, M.Jiang, H.Greer, W.Samuels, M.Orr, A.Fernandez, C.Majewski, J.Ludman, M.Dyack, S.Penney, L.McMaster, C.Huntsman, D.Bedard, K.2015-10-27T11:19:51Z2014-102014-10-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10400.16/1870engPLoS Genet. 2014;10(10): e10046691553-739010.1371/journal.pgen.1004669info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-10-20T10:57:55Zoai:repositorio.chporto.pt:10400.16/1870Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T20:38:11.670921Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Germline mutations in MAP3K6 are associated with familial gastric cancer
title Germline mutations in MAP3K6 are associated with familial gastric cancer
spellingShingle Germline mutations in MAP3K6 are associated with familial gastric cancer
Gaston, D.
title_short Germline mutations in MAP3K6 are associated with familial gastric cancer
title_full Germline mutations in MAP3K6 are associated with familial gastric cancer
title_fullStr Germline mutations in MAP3K6 are associated with familial gastric cancer
title_full_unstemmed Germline mutations in MAP3K6 are associated with familial gastric cancer
title_sort Germline mutations in MAP3K6 are associated with familial gastric cancer
author Gaston, D.
author_facet Gaston, D.
Hansford, S.
Oliveira, C.
Nightingale, M.
Pinheiro, H.
Macgillivray, C.
Kaurah, P.
Rideout, A.
Steele, P.
Soares, G.
Huang, W.
Whitehouse, S.
Blowers, S.
LeBlanc, M.
Jiang, H.
Greer, W.
Samuels, M.
Orr, A.
Fernandez, C.
Majewski, J.
Ludman, M.
Dyack, S.
Penney, L.
McMaster, C.
Huntsman, D.
Bedard, K.
author_role author
author2 Hansford, S.
Oliveira, C.
Nightingale, M.
Pinheiro, H.
Macgillivray, C.
Kaurah, P.
Rideout, A.
Steele, P.
Soares, G.
Huang, W.
Whitehouse, S.
Blowers, S.
LeBlanc, M.
Jiang, H.
Greer, W.
Samuels, M.
Orr, A.
Fernandez, C.
Majewski, J.
Ludman, M.
Dyack, S.
Penney, L.
McMaster, C.
Huntsman, D.
Bedard, K.
author2_role author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Repositório Científico do Centro Hospitalar Universitário de Santo António
dc.contributor.author.fl_str_mv Gaston, D.
Hansford, S.
Oliveira, C.
Nightingale, M.
Pinheiro, H.
Macgillivray, C.
Kaurah, P.
Rideout, A.
Steele, P.
Soares, G.
Huang, W.
Whitehouse, S.
Blowers, S.
LeBlanc, M.
Jiang, H.
Greer, W.
Samuels, M.
Orr, A.
Fernandez, C.
Majewski, J.
Ludman, M.
Dyack, S.
Penney, L.
McMaster, C.
Huntsman, D.
Bedard, K.
description Gastric cancer is among the leading causes of cancer-related deaths worldwide. While heritable forms of gastric cancer are relatively rare, identifying the genes responsible for such cases can inform diagnosis and treatment for both hereditary and sporadic cases of gastric cancer. Mutations in the E-cadherin gene, CDH1, account for 40% of the most common form of familial gastric cancer (FGC), hereditary diffuse gastric cancer (HDGC). The genes responsible for the remaining forms of FGC are currently unknown. Here we examined a large family from Maritime Canada with FGC without CDH1 mutations, and identified a germline coding variant (p.P946L) in mitogen-activated protein kinase kinase kinase 6 (MAP3K6). Based on conservation, predicted pathogenicity and a known role of the gene in cancer predisposition, MAP3K6 was considered a strong candidate and was investigated further. Screening of an additional 115 unrelated individuals with non-CDH1 FGC identified the p.P946L MAP3K6 variant, as well as four additional coding variants in MAP3K6 (p.F849Sfs*142, p.P958T, p.D200Y and p.V207G). A somatic second-hit variant (p.H506Y) was present in DNA obtained from one of the tumor specimens, and evidence of DNA hypermethylation within the MAP3K6 gene was observed in DNA from the tumor of another affected individual. These findings, together with previous evidence from mouse models that MAP3K6 acts as a tumor suppressor, and studies showing the presence of somatic mutations in MAP3K6 in non-hereditary gastric cancers and gastric cancer cell lines, point towards MAP3K6 variants as a predisposing factor for FGC.
publishDate 2014
dc.date.none.fl_str_mv 2014-10
2014-10-01T00:00:00Z
2015-10-27T11:19:51Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
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status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/10400.16/1870
url http://hdl.handle.net/10400.16/1870
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv PLoS Genet. 2014;10(10): e1004669
1553-7390
10.1371/journal.pgen.1004669
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eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Public Library of Science
publisher.none.fl_str_mv Public Library of Science
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