Application of a Computational Method for the Early Diagnosis of Prostate Cancer Using Proteomic Pattern Recognition

Detalhes bibliográficos
Autor(a) principal: Montes, Elzenir
Data de Publicação: 2018
Outros Autores: Campos, Lúcio, Araujo, Wesley, Santana, Ewaldo, Araujo, Claudyane
Tipo de documento: Artigo
Idioma: por
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: https://doi.org/10.34627/rcc.v11i0.85
Resumo: This paper presents a method based on the recognition of proteomic patterns for the early diagnosis of prostate cancer, using computational techniques, applied in the database of SELDI-TOF proteomic patterns. The method is based on classifying the individual as to the portability stage of prostate cancer. To do so, the Independent Component Analysis (ICA) technique is used to extract the characteristics, after which are utilized the algorithm of Maximum Relevance and Minimum Redundancy to reduce the computational cost, and finally the Support Vector Machine to obtain the classification. The best result of the method was obtained with a vector of 27 characteristics, achieving accuracy, specificity and sensitivity, respectively of 89.21%, 83.68% and 95.08%.
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spelling Application of a Computational Method for the Early Diagnosis of Prostate Cancer Using Proteomic Pattern RecognitionAplicação de um Método Computacional para o Diagnóstico Precoce do Câncer de Próstata Usando Reconhecimento de Padrões ProteômicosThis paper presents a method based on the recognition of proteomic patterns for the early diagnosis of prostate cancer, using computational techniques, applied in the database of SELDI-TOF proteomic patterns. The method is based on classifying the individual as to the portability stage of prostate cancer. To do so, the Independent Component Analysis (ICA) technique is used to extract the characteristics, after which are utilized the algorithm of Maximum Relevance and Minimum Redundancy to reduce the computational cost, and finally the Support Vector Machine to obtain the classification. The best result of the method was obtained with a vector of 27 characteristics, achieving accuracy, specificity and sensitivity, respectively of 89.21%, 83.68% and 95.08%.O presente trabalho apresenta um método baseado em reconhecimento de padrões proteômicos para o diagnóstico precoce do câncer de próstata, utilizando técnicas computacionais, aplicadas na base de dados de padrões proteômicos SELDI-TOF. O método baseia-se em classificar o indivíduo quanto ao estágio de portabilidade do câncer de próstata. Para tanto, usa-se a técnica de Análise de Componentes Independente (ICA) para extrair as características, depois o algoritmo de Máxima Relevância e Mínima Redundância para reduzir o custo computacional, e finalmente a Máquina de Vetores de Suporte para a classificação. Obtêm-se o melhor resultado do método com um vetor de 27 características, alcançando acurácia, especificidade e sensibilidade, respectivamente de 89,21%, 83,68% e 95,08%.Universidade Aberta2018-04-13info:eu-repo/semantics/articleinfo:eu-repo/semantics/otherinfo:eu-repo/semantics/publishedVersionapplication/pdfhttps://doi.org/10.34627/rcc.v11i0.85oai:ojs2.journals.uab.pt:article/85Revista de Ciências da Computação; v. 11 (2016); 1-142182-18011646-633010.34627/rcc.v11i0reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAPporhttps://journals.uab.pt/index.php/rcc/article/view/85https://doi.org/10.34627/rcc.v11i0.85https://journals.uab.pt/index.php/rcc/article/view/85/50Direitos de Autor (c) 2018 Universidade Abertahttp://creativecommons.org/licenses/by/4.0info:eu-repo/semantics/openAccessMontes, ElzenirCampos, LúcioAraujo, WesleySantana, EwaldoAraujo, Claudyane2022-10-25T11:31:54Zoai:ojs2.journals.uab.pt:article/85Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T16:14:00.015010Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Application of a Computational Method for the Early Diagnosis of Prostate Cancer Using Proteomic Pattern Recognition
Aplicação de um Método Computacional para o Diagnóstico Precoce do Câncer de Próstata Usando Reconhecimento de Padrões Proteômicos
title Application of a Computational Method for the Early Diagnosis of Prostate Cancer Using Proteomic Pattern Recognition
spellingShingle Application of a Computational Method for the Early Diagnosis of Prostate Cancer Using Proteomic Pattern Recognition
Montes, Elzenir
title_short Application of a Computational Method for the Early Diagnosis of Prostate Cancer Using Proteomic Pattern Recognition
title_full Application of a Computational Method for the Early Diagnosis of Prostate Cancer Using Proteomic Pattern Recognition
title_fullStr Application of a Computational Method for the Early Diagnosis of Prostate Cancer Using Proteomic Pattern Recognition
title_full_unstemmed Application of a Computational Method for the Early Diagnosis of Prostate Cancer Using Proteomic Pattern Recognition
title_sort Application of a Computational Method for the Early Diagnosis of Prostate Cancer Using Proteomic Pattern Recognition
author Montes, Elzenir
author_facet Montes, Elzenir
Campos, Lúcio
Araujo, Wesley
Santana, Ewaldo
Araujo, Claudyane
author_role author
author2 Campos, Lúcio
Araujo, Wesley
Santana, Ewaldo
Araujo, Claudyane
author2_role author
author
author
author
dc.contributor.author.fl_str_mv Montes, Elzenir
Campos, Lúcio
Araujo, Wesley
Santana, Ewaldo
Araujo, Claudyane
description This paper presents a method based on the recognition of proteomic patterns for the early diagnosis of prostate cancer, using computational techniques, applied in the database of SELDI-TOF proteomic patterns. The method is based on classifying the individual as to the portability stage of prostate cancer. To do so, the Independent Component Analysis (ICA) technique is used to extract the characteristics, after which are utilized the algorithm of Maximum Relevance and Minimum Redundancy to reduce the computational cost, and finally the Support Vector Machine to obtain the classification. The best result of the method was obtained with a vector of 27 characteristics, achieving accuracy, specificity and sensitivity, respectively of 89.21%, 83.68% and 95.08%.
publishDate 2018
dc.date.none.fl_str_mv 2018-04-13
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/other
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
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dc.identifier.uri.fl_str_mv https://doi.org/10.34627/rcc.v11i0.85
oai:ojs2.journals.uab.pt:article/85
url https://doi.org/10.34627/rcc.v11i0.85
identifier_str_mv oai:ojs2.journals.uab.pt:article/85
dc.language.iso.fl_str_mv por
language por
dc.relation.none.fl_str_mv https://journals.uab.pt/index.php/rcc/article/view/85
https://doi.org/10.34627/rcc.v11i0.85
https://journals.uab.pt/index.php/rcc/article/view/85/50
dc.rights.driver.fl_str_mv Direitos de Autor (c) 2018 Universidade Aberta
http://creativecommons.org/licenses/by/4.0
info:eu-repo/semantics/openAccess
rights_invalid_str_mv Direitos de Autor (c) 2018 Universidade Aberta
http://creativecommons.org/licenses/by/4.0
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Universidade Aberta
publisher.none.fl_str_mv Universidade Aberta
dc.source.none.fl_str_mv Revista de Ciências da Computação; v. 11 (2016); 1-14
2182-1801
1646-6330
10.34627/rcc.v11i0
reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
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instacron:RCAAP
instname_str Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron_str RCAAP
institution RCAAP
reponame_str Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
collection Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
repository.name.fl_str_mv Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
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