Is the high frequency of machado-joseph disease in China due to new mutational orignis?

Detalhes bibliográficos
Autor(a) principal: Li, T
Data de Publicação: 2019
Outros Autores: Martins, S, Peng, Y, Wang, P, Hou, X, Chen, Z, Wang, C, Tang, Z, Qiu, R, Chen, C, Hu, Z, Xia, K, Tang, B, Sequeiros, J, Jiang, H
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: https://hdl.handle.net/10216/136316
Resumo: Machado-Joseph disease (MJD, also known as spinocerebellar ataxia 3 or SCA3) is the most common dominant ataxia worldwide, with an overall average prevalence of 1-5/100,000. To this date, two major ancestral lineages have been found throughout the world. In China, the relative frequency of MJD among the SCAs reaches as high as 63%, however, little is known about its mutational origin in this country. We analyzed 50 families with MJD patients in two or more generations to study the hypothesis that new mutational events have occurred in this population. Haplotypes based on 20 SNPs have shown new genetic backgrounds segregating with MJD mutations in our cohort from China. We found the "Joseph-derived" lineage (Joseph lineage with a G variant in rs56268847) to be very common among Chinese MJD patients. Moreover, we estimated the time for the origin of this MJD SNP background based on STR diversity flanking the (CAG)n of ATXN3. It was surprising to find that the Chinese MJD population originated from 8,000 to 17,000 years ago, far earlier than the previous literature reports, which will be an important evidence to explain the origin, spread and founder effects of MJD.
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spelling Is the high frequency of machado-joseph disease in China due to new mutational orignis?Founder EffectHaplotypeMachado-Joseph DiseaseMutational OriginsSca3Spinocerebellar Ataxia Type 3Machado-Joseph disease (MJD, also known as spinocerebellar ataxia 3 or SCA3) is the most common dominant ataxia worldwide, with an overall average prevalence of 1-5/100,000. To this date, two major ancestral lineages have been found throughout the world. In China, the relative frequency of MJD among the SCAs reaches as high as 63%, however, little is known about its mutational origin in this country. We analyzed 50 families with MJD patients in two or more generations to study the hypothesis that new mutational events have occurred in this population. Haplotypes based on 20 SNPs have shown new genetic backgrounds segregating with MJD mutations in our cohort from China. We found the "Joseph-derived" lineage (Joseph lineage with a G variant in rs56268847) to be very common among Chinese MJD patients. Moreover, we estimated the time for the origin of this MJD SNP background based on STR diversity flanking the (CAG)n of ATXN3. It was surprising to find that the Chinese MJD population originated from 8,000 to 17,000 years ago, far earlier than the previous literature reports, which will be an important evidence to explain the origin, spread and founder effects of MJD.Frontiers Media20192019-01-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttps://hdl.handle.net/10216/136316eng1664-802110.3389/fgene.2018.00740Li, TMartins, SPeng, YWang, PHou, XChen, ZWang, CTang, ZQiu, RChen, CHu, ZXia, KTang, BSequeiros, JJiang, Hinfo:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-11-29T12:25:58Zoai:repositorio-aberto.up.pt:10216/136316Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T23:20:15.145736Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Is the high frequency of machado-joseph disease in China due to new mutational orignis?
title Is the high frequency of machado-joseph disease in China due to new mutational orignis?
spellingShingle Is the high frequency of machado-joseph disease in China due to new mutational orignis?
Li, T
Founder Effect
Haplotype
Machado-Joseph Disease
Mutational Origins
Sca3
Spinocerebellar Ataxia Type 3
title_short Is the high frequency of machado-joseph disease in China due to new mutational orignis?
title_full Is the high frequency of machado-joseph disease in China due to new mutational orignis?
title_fullStr Is the high frequency of machado-joseph disease in China due to new mutational orignis?
title_full_unstemmed Is the high frequency of machado-joseph disease in China due to new mutational orignis?
title_sort Is the high frequency of machado-joseph disease in China due to new mutational orignis?
author Li, T
author_facet Li, T
Martins, S
Peng, Y
Wang, P
Hou, X
Chen, Z
Wang, C
Tang, Z
Qiu, R
Chen, C
Hu, Z
Xia, K
Tang, B
Sequeiros, J
Jiang, H
author_role author
author2 Martins, S
Peng, Y
Wang, P
Hou, X
Chen, Z
Wang, C
Tang, Z
Qiu, R
Chen, C
Hu, Z
Xia, K
Tang, B
Sequeiros, J
Jiang, H
author2_role author
author
author
author
author
author
author
author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Li, T
Martins, S
Peng, Y
Wang, P
Hou, X
Chen, Z
Wang, C
Tang, Z
Qiu, R
Chen, C
Hu, Z
Xia, K
Tang, B
Sequeiros, J
Jiang, H
dc.subject.por.fl_str_mv Founder Effect
Haplotype
Machado-Joseph Disease
Mutational Origins
Sca3
Spinocerebellar Ataxia Type 3
topic Founder Effect
Haplotype
Machado-Joseph Disease
Mutational Origins
Sca3
Spinocerebellar Ataxia Type 3
description Machado-Joseph disease (MJD, also known as spinocerebellar ataxia 3 or SCA3) is the most common dominant ataxia worldwide, with an overall average prevalence of 1-5/100,000. To this date, two major ancestral lineages have been found throughout the world. In China, the relative frequency of MJD among the SCAs reaches as high as 63%, however, little is known about its mutational origin in this country. We analyzed 50 families with MJD patients in two or more generations to study the hypothesis that new mutational events have occurred in this population. Haplotypes based on 20 SNPs have shown new genetic backgrounds segregating with MJD mutations in our cohort from China. We found the "Joseph-derived" lineage (Joseph lineage with a G variant in rs56268847) to be very common among Chinese MJD patients. Moreover, we estimated the time for the origin of this MJD SNP background based on STR diversity flanking the (CAG)n of ATXN3. It was surprising to find that the Chinese MJD population originated from 8,000 to 17,000 years ago, far earlier than the previous literature reports, which will be an important evidence to explain the origin, spread and founder effects of MJD.
publishDate 2019
dc.date.none.fl_str_mv 2019
2019-01-01T00:00:00Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv https://hdl.handle.net/10216/136316
url https://hdl.handle.net/10216/136316
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 1664-8021
10.3389/fgene.2018.00740
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Frontiers Media
publisher.none.fl_str_mv Frontiers Media
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
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instacron_str RCAAP
institution RCAAP
reponame_str Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
collection Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
repository.name.fl_str_mv Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
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