Unravelling wild carrot differentiation in Europe: preliminary data on a candidate gene approach

Detalhes bibliográficos
Autor(a) principal: Nobre, T.
Data de Publicação: 2017
Outros Autores: Ragonezi, C., Arnholdt-Schmitt, B.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10400.13/4047
Resumo: Carrot is an outcrossing species and levels of gene flow between populations, and even between wild and domesticated relatives, are expected to be high. Cases of natural hybridization and introgression of crops and wild relatives have been reported. Have these events diluted any putative habitat-adapted genotypes? In other words, can we still find a correlation between wild carrot genotypes and regional/local environment? We have chosen to start addressing this question using a member of the alternative oxidase (AOX) gene family. AOX genes seem to be linked to all kinds of abiotic and biotic stress reactions. Wild carrots were sampled in an environmental gradient across Western Europe. This gradient included sampling points with more deviating conditions, such as Sierra de Guadarrama or the central Pyrenees and the French Massif Central. Phylogenetic reconstruction on this molecular marker is to be combined with geographic, climatic, and ecological evidence. So far, the preliminary results suggest the existence of a biogeographical barrier at the Pyrenees, and higher gene diversity than initially expected. From an applied point of view, diversity of functional traits is much more relevant than species diversity. Gene transfer from wild to cultivated plants has contributed to the evolution of crop species. Providing that deterioration of genetic resources and biodiversity loss have not been drastic, gene transfer from wild plants has the potential to further contribute to a (targeted) improvement of cultivars.
id RCAP_977f5b7de7cb5f37215b0d96abdb06e0
oai_identifier_str oai:digituma.uma.pt:10400.13/4047
network_acronym_str RCAP
network_name_str Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
repository_id_str
spelling Unravelling wild carrot differentiation in Europe: preliminary data on a candidate gene approachDaucus carota L.AOXHabitat-adaptedWild crop relativesHybridization.Escola Superior de Tecnologias e GestãoCarrot is an outcrossing species and levels of gene flow between populations, and even between wild and domesticated relatives, are expected to be high. Cases of natural hybridization and introgression of crops and wild relatives have been reported. Have these events diluted any putative habitat-adapted genotypes? In other words, can we still find a correlation between wild carrot genotypes and regional/local environment? We have chosen to start addressing this question using a member of the alternative oxidase (AOX) gene family. AOX genes seem to be linked to all kinds of abiotic and biotic stress reactions. Wild carrots were sampled in an environmental gradient across Western Europe. This gradient included sampling points with more deviating conditions, such as Sierra de Guadarrama or the central Pyrenees and the French Massif Central. Phylogenetic reconstruction on this molecular marker is to be combined with geographic, climatic, and ecological evidence. So far, the preliminary results suggest the existence of a biogeographical barrier at the Pyrenees, and higher gene diversity than initially expected. From an applied point of view, diversity of functional traits is much more relevant than species diversity. Gene transfer from wild to cultivated plants has contributed to the evolution of crop species. Providing that deterioration of genetic resources and biodiversity loss have not been drastic, gene transfer from wild plants has the potential to further contribute to a (targeted) improvement of cultivars.International Society for Horticultural Science (ISHS)DigitUMaNobre, T.Ragonezi, C.Arnholdt-Schmitt, B.2022-02-04T15:47:28Z20172017-01-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10400.13/4047engNobre, T., Ragonezi, C., & Arnholdt-Schmitt, B(2017). Unravelling wild carrot differentiation in Europe – preliminary data on a candidate gene approach. Acta horticulturae, v. no.1153 , 279-286. doi: 10.17660/ActaHortic.2017.1153.4110.17660/ActaHortic.2017.1153.41info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-03-19T05:36:26ZPortal AgregadorONG
dc.title.none.fl_str_mv Unravelling wild carrot differentiation in Europe: preliminary data on a candidate gene approach
title Unravelling wild carrot differentiation in Europe: preliminary data on a candidate gene approach
spellingShingle Unravelling wild carrot differentiation in Europe: preliminary data on a candidate gene approach
Nobre, T.
Daucus carota L.
AOX
Habitat-adapted
Wild crop relatives
Hybridization
.
Escola Superior de Tecnologias e Gestão
title_short Unravelling wild carrot differentiation in Europe: preliminary data on a candidate gene approach
title_full Unravelling wild carrot differentiation in Europe: preliminary data on a candidate gene approach
title_fullStr Unravelling wild carrot differentiation in Europe: preliminary data on a candidate gene approach
title_full_unstemmed Unravelling wild carrot differentiation in Europe: preliminary data on a candidate gene approach
title_sort Unravelling wild carrot differentiation in Europe: preliminary data on a candidate gene approach
author Nobre, T.
author_facet Nobre, T.
Ragonezi, C.
Arnholdt-Schmitt, B.
author_role author
author2 Ragonezi, C.
Arnholdt-Schmitt, B.
author2_role author
author
dc.contributor.none.fl_str_mv DigitUMa
dc.contributor.author.fl_str_mv Nobre, T.
Ragonezi, C.
Arnholdt-Schmitt, B.
dc.subject.por.fl_str_mv Daucus carota L.
AOX
Habitat-adapted
Wild crop relatives
Hybridization
.
Escola Superior de Tecnologias e Gestão
topic Daucus carota L.
AOX
Habitat-adapted
Wild crop relatives
Hybridization
.
Escola Superior de Tecnologias e Gestão
description Carrot is an outcrossing species and levels of gene flow between populations, and even between wild and domesticated relatives, are expected to be high. Cases of natural hybridization and introgression of crops and wild relatives have been reported. Have these events diluted any putative habitat-adapted genotypes? In other words, can we still find a correlation between wild carrot genotypes and regional/local environment? We have chosen to start addressing this question using a member of the alternative oxidase (AOX) gene family. AOX genes seem to be linked to all kinds of abiotic and biotic stress reactions. Wild carrots were sampled in an environmental gradient across Western Europe. This gradient included sampling points with more deviating conditions, such as Sierra de Guadarrama or the central Pyrenees and the French Massif Central. Phylogenetic reconstruction on this molecular marker is to be combined with geographic, climatic, and ecological evidence. So far, the preliminary results suggest the existence of a biogeographical barrier at the Pyrenees, and higher gene diversity than initially expected. From an applied point of view, diversity of functional traits is much more relevant than species diversity. Gene transfer from wild to cultivated plants has contributed to the evolution of crop species. Providing that deterioration of genetic resources and biodiversity loss have not been drastic, gene transfer from wild plants has the potential to further contribute to a (targeted) improvement of cultivars.
publishDate 2017
dc.date.none.fl_str_mv 2017
2017-01-01T00:00:00Z
2022-02-04T15:47:28Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/10400.13/4047
url http://hdl.handle.net/10400.13/4047
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Nobre, T., Ragonezi, C., & Arnholdt-Schmitt, B(2017). Unravelling wild carrot differentiation in Europe – preliminary data on a candidate gene approach. Acta horticulturae, v. no.1153 , 279-286. doi: 10.17660/ActaHortic.2017.1153.41
10.17660/ActaHortic.2017.1153.41
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv International Society for Horticultural Science (ISHS)
publisher.none.fl_str_mv International Society for Horticultural Science (ISHS)
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron:RCAAP
instname_str Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron_str RCAAP
institution RCAAP
reponame_str Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
collection Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
repository.name.fl_str_mv
repository.mail.fl_str_mv
_version_ 1777301222011699200