The Amidella clade in Europe (Basidiomycota: Amanitaceae): clarification of the contentious Amanita valens (E.-J.Gilbert) Bertault and the importance of taxon-specific PCR primers for identification

Detalhes bibliográficos
Autor(a) principal: Arraiano-Castilho, Ricardo
Data de Publicação: 2022
Outros Autores: Silva, Ana Cristina, Vila-Viçosa, Carlos, Castro, Mário Rui, Morgado, Luís Neves, Oliveira, Paulo
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10174/33694
https://doi.org/Arraiano-Castilho R., Silva A. C., Vila-Viçosa C., Castro M. R., Morgado L. N. & Oliveira P. 2022. — The Amidella clade in Europe (Basidiomycota: Amanitaceae): clarification of the contentious Amanita valens (E.-J.Gilbert) Bertault and the importance of taxon-specific PCR primers for identification. Cryptogamie, Mycologie 43 (6): 139-157. https://doi.org/10.5252/cryptogamie-mycologie2022v43a6. http://cryptogamie.com/mycologie/43/6
https://doi.org/10.5252/cryptogamie-mycologie2022v43a6
Resumo: The species in Amanita ser. Amidella (E.-J.Gilbert) Neville & Poumarat form a well-defined clade, but some taxa remain difficult to discriminate. In particular, the concept of Amanita valens (E.-J.Gilbert) Bertault remains controversial. To understand the phylogenetic placement of a set of collections from southern Portugal with a novel nrDNA barcode, we have obtained nrDNA sequences for previously unassessed type collections. The taxon formerly described as A. curtipes f. pseudovalens Neville & Poumarat is interpreted as a separate species, A. pseudovalens comb. nov., stat. nov., and is genetically indistinct from those Portuguese collections, thus clarifying their taxonomic context. However, the morphology and ecology of our collections are distinct (respectively, ellipsoid to oblong basidiospores and occurrence on schist soils), and are proposed as a new variety, A. pseudovalens var. tartessiana var. nov. These developments also enable a better diagnosis of the taxa of series Amidella in Europe, a progress that is most decisive for the late winter to spring collections, and an identification key is proposed. Still, the co-occurrence and morphological similarity of the new variety with the prized edible A. ponderosa Malençon & R.Heim could leave some collections of either taxon unresolved. Thus, a molecular marker approach was developed, to provide a clear and cost-effective identifica- tion aid to complement the key. The proposed diagnostic tools can be applied toward a review of European Amidella taxa chorology from existing records, conserved materials, and future collections.
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spelling The Amidella clade in Europe (Basidiomycota: Amanitaceae): clarification of the contentious Amanita valens (E.-J.Gilbert) Bertault and the importance of taxon-specific PCR primers for identificationPortugalPhylogenytaxonomic probesevolutionary convergencenew combinationnew statusnew varietyThe species in Amanita ser. Amidella (E.-J.Gilbert) Neville & Poumarat form a well-defined clade, but some taxa remain difficult to discriminate. In particular, the concept of Amanita valens (E.-J.Gilbert) Bertault remains controversial. To understand the phylogenetic placement of a set of collections from southern Portugal with a novel nrDNA barcode, we have obtained nrDNA sequences for previously unassessed type collections. The taxon formerly described as A. curtipes f. pseudovalens Neville & Poumarat is interpreted as a separate species, A. pseudovalens comb. nov., stat. nov., and is genetically indistinct from those Portuguese collections, thus clarifying their taxonomic context. However, the morphology and ecology of our collections are distinct (respectively, ellipsoid to oblong basidiospores and occurrence on schist soils), and are proposed as a new variety, A. pseudovalens var. tartessiana var. nov. These developments also enable a better diagnosis of the taxa of series Amidella in Europe, a progress that is most decisive for the late winter to spring collections, and an identification key is proposed. Still, the co-occurrence and morphological similarity of the new variety with the prized edible A. ponderosa Malençon & R.Heim could leave some collections of either taxon unresolved. Thus, a molecular marker approach was developed, to provide a clear and cost-effective identifica- tion aid to complement the key. The proposed diagnostic tools can be applied toward a review of European Amidella taxa chorology from existing records, conserved materials, and future collections.Diffusion – Publications scientifiques Muséum national d’Histoire naturelle2023-01-30T15:28:28Z2023-01-302022-10-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttp://hdl.handle.net/10174/33694https://doi.org/Arraiano-Castilho R., Silva A. C., Vila-Viçosa C., Castro M. R., Morgado L. N. & Oliveira P. 2022. — The Amidella clade in Europe (Basidiomycota: Amanitaceae): clarification of the contentious Amanita valens (E.-J.Gilbert) Bertault and the importance of taxon-specific PCR primers for identification. Cryptogamie, Mycologie 43 (6): 139-157. https://doi.org/10.5252/cryptogamie-mycologie2022v43a6. http://cryptogamie.com/mycologie/43/6https://doi.org/10.5252/cryptogamie-mycologie2022v43a6http://hdl.handle.net/10174/33694https://doi.org/10.5252/cryptogamie-mycologie2022v43a6engricardo.m.castilho@gmail.comanacristina.silva@iniav.ptcmvvicosa@mhnc.up.ptmrcbcastro@gmail.comxakazulo@gmail.comoliveira@uevora.pt366Arraiano-Castilho, RicardoSilva, Ana CristinaVila-Viçosa, CarlosCastro, Mário RuiMorgado, Luís NevesOliveira, Pauloinfo:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-08-08T04:49:32ZPortal AgregadorONG
dc.title.none.fl_str_mv The Amidella clade in Europe (Basidiomycota: Amanitaceae): clarification of the contentious Amanita valens (E.-J.Gilbert) Bertault and the importance of taxon-specific PCR primers for identification
title The Amidella clade in Europe (Basidiomycota: Amanitaceae): clarification of the contentious Amanita valens (E.-J.Gilbert) Bertault and the importance of taxon-specific PCR primers for identification
spellingShingle The Amidella clade in Europe (Basidiomycota: Amanitaceae): clarification of the contentious Amanita valens (E.-J.Gilbert) Bertault and the importance of taxon-specific PCR primers for identification
Arraiano-Castilho, Ricardo
Portugal
Phylogeny
taxonomic probes
evolutionary convergence
new combination
new status
new variety
title_short The Amidella clade in Europe (Basidiomycota: Amanitaceae): clarification of the contentious Amanita valens (E.-J.Gilbert) Bertault and the importance of taxon-specific PCR primers for identification
title_full The Amidella clade in Europe (Basidiomycota: Amanitaceae): clarification of the contentious Amanita valens (E.-J.Gilbert) Bertault and the importance of taxon-specific PCR primers for identification
title_fullStr The Amidella clade in Europe (Basidiomycota: Amanitaceae): clarification of the contentious Amanita valens (E.-J.Gilbert) Bertault and the importance of taxon-specific PCR primers for identification
title_full_unstemmed The Amidella clade in Europe (Basidiomycota: Amanitaceae): clarification of the contentious Amanita valens (E.-J.Gilbert) Bertault and the importance of taxon-specific PCR primers for identification
title_sort The Amidella clade in Europe (Basidiomycota: Amanitaceae): clarification of the contentious Amanita valens (E.-J.Gilbert) Bertault and the importance of taxon-specific PCR primers for identification
author Arraiano-Castilho, Ricardo
author_facet Arraiano-Castilho, Ricardo
Silva, Ana Cristina
Vila-Viçosa, Carlos
Castro, Mário Rui
Morgado, Luís Neves
Oliveira, Paulo
author_role author
author2 Silva, Ana Cristina
Vila-Viçosa, Carlos
Castro, Mário Rui
Morgado, Luís Neves
Oliveira, Paulo
author2_role author
author
author
author
author
dc.contributor.author.fl_str_mv Arraiano-Castilho, Ricardo
Silva, Ana Cristina
Vila-Viçosa, Carlos
Castro, Mário Rui
Morgado, Luís Neves
Oliveira, Paulo
dc.subject.por.fl_str_mv Portugal
Phylogeny
taxonomic probes
evolutionary convergence
new combination
new status
new variety
topic Portugal
Phylogeny
taxonomic probes
evolutionary convergence
new combination
new status
new variety
description The species in Amanita ser. Amidella (E.-J.Gilbert) Neville & Poumarat form a well-defined clade, but some taxa remain difficult to discriminate. In particular, the concept of Amanita valens (E.-J.Gilbert) Bertault remains controversial. To understand the phylogenetic placement of a set of collections from southern Portugal with a novel nrDNA barcode, we have obtained nrDNA sequences for previously unassessed type collections. The taxon formerly described as A. curtipes f. pseudovalens Neville & Poumarat is interpreted as a separate species, A. pseudovalens comb. nov., stat. nov., and is genetically indistinct from those Portuguese collections, thus clarifying their taxonomic context. However, the morphology and ecology of our collections are distinct (respectively, ellipsoid to oblong basidiospores and occurrence on schist soils), and are proposed as a new variety, A. pseudovalens var. tartessiana var. nov. These developments also enable a better diagnosis of the taxa of series Amidella in Europe, a progress that is most decisive for the late winter to spring collections, and an identification key is proposed. Still, the co-occurrence and morphological similarity of the new variety with the prized edible A. ponderosa Malençon & R.Heim could leave some collections of either taxon unresolved. Thus, a molecular marker approach was developed, to provide a clear and cost-effective identifica- tion aid to complement the key. The proposed diagnostic tools can be applied toward a review of European Amidella taxa chorology from existing records, conserved materials, and future collections.
publishDate 2022
dc.date.none.fl_str_mv 2022-10-01T00:00:00Z
2023-01-30T15:28:28Z
2023-01-30
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/10174/33694
https://doi.org/Arraiano-Castilho R., Silva A. C., Vila-Viçosa C., Castro M. R., Morgado L. N. & Oliveira P. 2022. — The Amidella clade in Europe (Basidiomycota: Amanitaceae): clarification of the contentious Amanita valens (E.-J.Gilbert) Bertault and the importance of taxon-specific PCR primers for identification. Cryptogamie, Mycologie 43 (6): 139-157. https://doi.org/10.5252/cryptogamie-mycologie2022v43a6. http://cryptogamie.com/mycologie/43/6
https://doi.org/10.5252/cryptogamie-mycologie2022v43a6
http://hdl.handle.net/10174/33694
https://doi.org/10.5252/cryptogamie-mycologie2022v43a6
url http://hdl.handle.net/10174/33694
https://doi.org/Arraiano-Castilho R., Silva A. C., Vila-Viçosa C., Castro M. R., Morgado L. N. & Oliveira P. 2022. — The Amidella clade in Europe (Basidiomycota: Amanitaceae): clarification of the contentious Amanita valens (E.-J.Gilbert) Bertault and the importance of taxon-specific PCR primers for identification. Cryptogamie, Mycologie 43 (6): 139-157. https://doi.org/10.5252/cryptogamie-mycologie2022v43a6. http://cryptogamie.com/mycologie/43/6
https://doi.org/10.5252/cryptogamie-mycologie2022v43a6
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv ricardo.m.castilho@gmail.com
anacristina.silva@iniav.pt
cmvvicosa@mhnc.up.pt
mrcbcastro@gmail.com
xakazulo@gmail.com
oliveira@uevora.pt
366
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.publisher.none.fl_str_mv Diffusion – Publications scientifiques Muséum national d’Histoire naturelle
publisher.none.fl_str_mv Diffusion – Publications scientifiques Muséum national d’Histoire naturelle
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
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instacron:RCAAP
instname_str Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
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institution RCAAP
reponame_str Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
collection Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
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