Olive Tree (Olea europaea L.) diversity in traditional small farms of Ficalho, Portugal
Autor(a) principal: | |
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Data de Publicação: | 2018 |
Outros Autores: | , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
Texto Completo: | https://doi.org/10.3390/d10010005 |
Resumo: | The genetic diversity of "Gama" and "Bico de Corvo", local cultivars of olive tree (Olea europaea) from seven traditional orchards of Ficalho (Alentejo region, Portugal), was studied to characterize the local diversity and assess the level of on farm diversity. Two different analytical systems were used: endocarp morphological characteristics and genetic analysis by microsatellite markers (Simple Sequence Repeats or SSR). The seven screened loci were polymorphic and allowed the identification of 23 distinct SSR profiles within the 27 trees analyzed. A total of 52 different alleles were scored, with an average of 7.43 alleles/SSR locus, and considerable genetic diversity was found. Neighbor-Joining algorithm cluster analysis and principal co-ordinate analysis (PCoA) allowed for the identification of the genetic relationships between several accessions. The 27 Olea accessions were clearly separated into three different groups. SSR analysis was more precise than endocarp characterization in the classification of genetic diversity among the olive tree cultivars. The study shows reasonable olive tree diversity in Ficalho, indicating that these traditional orchards are important reservoirs of old minor cultivars and incubators of new genotypes. |
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Olive Tree (Olea europaea L.) diversity in traditional small farms of Ficalho, PortugalEndocarp characterizationOlive tree local cultivarsOn farm conservationSSR genotypingEcologyEcological ModellingAgricultural and Biological Sciences (miscellaneous)Nature and Landscape ConservationThe genetic diversity of "Gama" and "Bico de Corvo", local cultivars of olive tree (Olea europaea) from seven traditional orchards of Ficalho (Alentejo region, Portugal), was studied to characterize the local diversity and assess the level of on farm diversity. Two different analytical systems were used: endocarp morphological characteristics and genetic analysis by microsatellite markers (Simple Sequence Repeats or SSR). The seven screened loci were polymorphic and allowed the identification of 23 distinct SSR profiles within the 27 trees analyzed. A total of 52 different alleles were scored, with an average of 7.43 alleles/SSR locus, and considerable genetic diversity was found. Neighbor-Joining algorithm cluster analysis and principal co-ordinate analysis (PCoA) allowed for the identification of the genetic relationships between several accessions. The 27 Olea accessions were clearly separated into three different groups. SSR analysis was more precise than endocarp characterization in the classification of genetic diversity among the olive tree cultivars. The study shows reasonable olive tree diversity in Ficalho, indicating that these traditional orchards are important reservoirs of old minor cultivars and incubators of new genotypes.Bioresources 4 Sustainability (GREEN-IT)Instituto de Tecnologia Química e Biológica António Xavier (ITQB)RUNVeloso, Maria ManuelaSimões-Costa, Maria CristinaCarneiro, Luís C.Guimarães, Joana B.Mateus, CéliaFevereiro, PedroPinto-Ricardo, Cândido2019-05-03T22:16:14Z2018-03-012018-03-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttps://doi.org/10.3390/d10010005eng1424-2818PURE: 12562007http://www.scopus.com/inward/record.url?scp=85042237107&partnerID=8YFLogxKhttps://doi.org/10.3390/d10010005info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2024-03-11T04:32:26Zoai:run.unl.pt:10362/68553Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-20T03:34:47.776038Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse |
dc.title.none.fl_str_mv |
Olive Tree (Olea europaea L.) diversity in traditional small farms of Ficalho, Portugal |
title |
Olive Tree (Olea europaea L.) diversity in traditional small farms of Ficalho, Portugal |
spellingShingle |
Olive Tree (Olea europaea L.) diversity in traditional small farms of Ficalho, Portugal Veloso, Maria Manuela Endocarp characterization Olive tree local cultivars On farm conservation SSR genotyping Ecology Ecological Modelling Agricultural and Biological Sciences (miscellaneous) Nature and Landscape Conservation |
title_short |
Olive Tree (Olea europaea L.) diversity in traditional small farms of Ficalho, Portugal |
title_full |
Olive Tree (Olea europaea L.) diversity in traditional small farms of Ficalho, Portugal |
title_fullStr |
Olive Tree (Olea europaea L.) diversity in traditional small farms of Ficalho, Portugal |
title_full_unstemmed |
Olive Tree (Olea europaea L.) diversity in traditional small farms of Ficalho, Portugal |
title_sort |
Olive Tree (Olea europaea L.) diversity in traditional small farms of Ficalho, Portugal |
author |
Veloso, Maria Manuela |
author_facet |
Veloso, Maria Manuela Simões-Costa, Maria Cristina Carneiro, Luís C. Guimarães, Joana B. Mateus, Célia Fevereiro, Pedro Pinto-Ricardo, Cândido |
author_role |
author |
author2 |
Simões-Costa, Maria Cristina Carneiro, Luís C. Guimarães, Joana B. Mateus, Célia Fevereiro, Pedro Pinto-Ricardo, Cândido |
author2_role |
author author author author author author |
dc.contributor.none.fl_str_mv |
Bioresources 4 Sustainability (GREEN-IT) Instituto de Tecnologia Química e Biológica António Xavier (ITQB) RUN |
dc.contributor.author.fl_str_mv |
Veloso, Maria Manuela Simões-Costa, Maria Cristina Carneiro, Luís C. Guimarães, Joana B. Mateus, Célia Fevereiro, Pedro Pinto-Ricardo, Cândido |
dc.subject.por.fl_str_mv |
Endocarp characterization Olive tree local cultivars On farm conservation SSR genotyping Ecology Ecological Modelling Agricultural and Biological Sciences (miscellaneous) Nature and Landscape Conservation |
topic |
Endocarp characterization Olive tree local cultivars On farm conservation SSR genotyping Ecology Ecological Modelling Agricultural and Biological Sciences (miscellaneous) Nature and Landscape Conservation |
description |
The genetic diversity of "Gama" and "Bico de Corvo", local cultivars of olive tree (Olea europaea) from seven traditional orchards of Ficalho (Alentejo region, Portugal), was studied to characterize the local diversity and assess the level of on farm diversity. Two different analytical systems were used: endocarp morphological characteristics and genetic analysis by microsatellite markers (Simple Sequence Repeats or SSR). The seven screened loci were polymorphic and allowed the identification of 23 distinct SSR profiles within the 27 trees analyzed. A total of 52 different alleles were scored, with an average of 7.43 alleles/SSR locus, and considerable genetic diversity was found. Neighbor-Joining algorithm cluster analysis and principal co-ordinate analysis (PCoA) allowed for the identification of the genetic relationships between several accessions. The 27 Olea accessions were clearly separated into three different groups. SSR analysis was more precise than endocarp characterization in the classification of genetic diversity among the olive tree cultivars. The study shows reasonable olive tree diversity in Ficalho, indicating that these traditional orchards are important reservoirs of old minor cultivars and incubators of new genotypes. |
publishDate |
2018 |
dc.date.none.fl_str_mv |
2018-03-01 2018-03-01T00:00:00Z 2019-05-03T22:16:14Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
https://doi.org/10.3390/d10010005 |
url |
https://doi.org/10.3390/d10010005 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
1424-2818 PURE: 12562007 http://www.scopus.com/inward/record.url?scp=85042237107&partnerID=8YFLogxK https://doi.org/10.3390/d10010005 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
application/pdf |
dc.source.none.fl_str_mv |
reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação instacron:RCAAP |
instname_str |
Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
instacron_str |
RCAAP |
institution |
RCAAP |
reponame_str |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
collection |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
repository.name.fl_str_mv |
Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
repository.mail.fl_str_mv |
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1799137969886461952 |