An Angiosperm species dataset reveals relationships between seed size and two-dimensional shape

Detalhes bibliográficos
Autor(a) principal: Cervantes, E.
Data de Publicação: 2019
Outros Autores: Gómez, J.J.M., del Pozo, D.G., Dias, L.S.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10174/25933
https://doi.org/10.3390/horticulturae5040071
Resumo: Datasets containing information on seed size have been published and are currently available. Nevertheless, there is a lack in the literature of a dataset dedicated to seed shape. We present a preliminary version for a dataset on seed morphology based on a comparison of seed shape with geometric figures. Similarity of the outline of seed images with geometric models is considered as a basis to classify seeds according to the geometric figures they resemble (e.g., ellipse, oval, cardioid). This allows, first, the classification of plant species according to their geometric type of seed, and second, seed shape quantification. For each seed image, the percent of similarity of their outline with a geometric figure can be calculated as a J index. Similarity in absolute terms is considered only when the J index >90. This criterion is important to avoid ambiguity and increase discrimination. The dataset opens the possibility of studying the relationship between seed shape and other variables such as seed size, genome complexity, life form or adaptive responses.
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spelling An Angiosperm species dataset reveals relationships between seed size and two-dimensional shapeBanco de sementesDatasets containing information on seed size have been published and are currently available. Nevertheless, there is a lack in the literature of a dataset dedicated to seed shape. We present a preliminary version for a dataset on seed morphology based on a comparison of seed shape with geometric figures. Similarity of the outline of seed images with geometric models is considered as a basis to classify seeds according to the geometric figures they resemble (e.g., ellipse, oval, cardioid). This allows, first, the classification of plant species according to their geometric type of seed, and second, seed shape quantification. For each seed image, the percent of similarity of their outline with a geometric figure can be calculated as a J index. Similarity in absolute terms is considered only when the J index >90. This criterion is important to avoid ambiguity and increase discrimination. The dataset opens the possibility of studying the relationship between seed shape and other variables such as seed size, genome complexity, life form or adaptive responses.2019-10-11T09:57:30Z2019-10-112019-01-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttp://hdl.handle.net/10174/25933http://hdl.handle.net/10174/25933https://doi.org/10.3390/horticulturae5040071engCervantes E, Gómez JJM, Pozo DG, Dias LS 2019. An Angiosperm species dataset reveals relationships between seed size and two-dimensional shape. Horticulturae 5, 71https://www.mdpi.com/2311-7524/5/4/71ndndndnd363Cervantes, E.Gómez, J.J.M.del Pozo, D.G.Dias, L.S.info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-08-08T04:35:44ZPortal AgregadorONG
dc.title.none.fl_str_mv An Angiosperm species dataset reveals relationships between seed size and two-dimensional shape
title An Angiosperm species dataset reveals relationships between seed size and two-dimensional shape
spellingShingle An Angiosperm species dataset reveals relationships between seed size and two-dimensional shape
Cervantes, E.
Banco de sementes
title_short An Angiosperm species dataset reveals relationships between seed size and two-dimensional shape
title_full An Angiosperm species dataset reveals relationships between seed size and two-dimensional shape
title_fullStr An Angiosperm species dataset reveals relationships between seed size and two-dimensional shape
title_full_unstemmed An Angiosperm species dataset reveals relationships between seed size and two-dimensional shape
title_sort An Angiosperm species dataset reveals relationships between seed size and two-dimensional shape
author Cervantes, E.
author_facet Cervantes, E.
Gómez, J.J.M.
del Pozo, D.G.
Dias, L.S.
author_role author
author2 Gómez, J.J.M.
del Pozo, D.G.
Dias, L.S.
author2_role author
author
author
dc.contributor.author.fl_str_mv Cervantes, E.
Gómez, J.J.M.
del Pozo, D.G.
Dias, L.S.
dc.subject.por.fl_str_mv Banco de sementes
topic Banco de sementes
description Datasets containing information on seed size have been published and are currently available. Nevertheless, there is a lack in the literature of a dataset dedicated to seed shape. We present a preliminary version for a dataset on seed morphology based on a comparison of seed shape with geometric figures. Similarity of the outline of seed images with geometric models is considered as a basis to classify seeds according to the geometric figures they resemble (e.g., ellipse, oval, cardioid). This allows, first, the classification of plant species according to their geometric type of seed, and second, seed shape quantification. For each seed image, the percent of similarity of their outline with a geometric figure can be calculated as a J index. Similarity in absolute terms is considered only when the J index >90. This criterion is important to avoid ambiguity and increase discrimination. The dataset opens the possibility of studying the relationship between seed shape and other variables such as seed size, genome complexity, life form or adaptive responses.
publishDate 2019
dc.date.none.fl_str_mv 2019-10-11T09:57:30Z
2019-10-11
2019-01-01T00:00:00Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/10174/25933
http://hdl.handle.net/10174/25933
https://doi.org/10.3390/horticulturae5040071
url http://hdl.handle.net/10174/25933
https://doi.org/10.3390/horticulturae5040071
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Cervantes E, Gómez JJM, Pozo DG, Dias LS 2019. An Angiosperm species dataset reveals relationships between seed size and two-dimensional shape. Horticulturae 5, 71
https://www.mdpi.com/2311-7524/5/4/71
nd
nd
nd
nd
363
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron:RCAAP
instname_str Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron_str RCAAP
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reponame_str Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
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