Nomenclatural issues concerning cultured yeasts and other fungi
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| Data de Publicação: | 2021 |
| Outros Autores: | , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , |
| Tipo de documento: | Artigo |
| Idioma: | eng |
| Título da fonte: | Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) |
| Texto Completo: | http://hdl.handle.net/10362/139237 |
Resumo: | Funding Information: MT was supported by the Institute for Fermentation Osaka (IFO), Japan. Publisher Copyright: © 2021, The Author(s). |
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Nomenclatural issues concerning cultured yeasts and other fungiwhy it is important to avoid unneeded name changesCulture collectionMetabolically inactiveNomenclatural typeTypificationViable strainsEcology, Evolution, Behavior and SystematicsAgricultural and Biological Sciences (miscellaneous)SDG 2 - Zero HungerFunding Information: MT was supported by the Institute for Fermentation Osaka (IFO), Japan. Publisher Copyright: © 2021, The Author(s).The unambiguous application of fungal names is important to communicate scientific findings. Names are critical for (clinical) diagnostics, legal compliance, and regulatory controls, such as biosafety, food security, quarantine regulations, and industrial applications. Consequently, the stability of the taxonomic system and the traceability of nomenclatural changes is crucial for a broad range of users and taxonomists. The unambiguous application of names is assured by the preservation of nomenclatural history and the physical organisms representing a name. Fungi are extremely diverse in terms of ecology, lifestyle, and methods of study. Predominantly unicellular fungi known as yeasts are usually investigated as living cultures. Methods to characterize yeasts include physiological (growth) tests and experiments to induce a sexual morph; both methods require viable cultures. Thus, the preservation and availability of viable reference cultures are important, and cultures representing reference material are cited in species descriptions. Historical surveys revealed drawbacks and inconsistencies between past practices and modern requirements as stated in the International Code of Nomenclature for Algae, Fungi, and Plants (ICNafp). Improper typification of yeasts is a common problem, resulting in a large number invalid yeast species names. With this opinion letter, we address the problem that culturable microorganisms, notably some fungi and algae, require specific provisions under the ICNafp. We use yeasts as a prominent example of fungi known from cultures. But viable type material is important not only for yeasts, but also for other cultivable Fungi that are characterized by particular morphological structures (a specific type of spores), growth properties, and secondary metabolites. We summarize potential proposals which, in our opinion, will improve the stability of fungal names, in particular by protecting those names for which the reference material can be traced back to the original isolate.UCIBIO - Applied Molecular Biosciences UnitDCV - Departamento de Ciências da VidaRUNYurkov, AndreyAlves, ArturBai, Feng YanBoundy-Mills, KyriaBuzzini, PietroČadež, NežaCardinali, GianluigiCasaregola, SergeChaturvedi, VishnuCollin, ValérieFell, Jack W.Girard, VictoriaGroenewald, MarizethHagen, FerryHittinger, Chris ToddKachalkin, Aleksey V.Kostrzewa, MarkusKouvelis, VassiliLibkind, DiegoLiu, XinzhanMaier, ThomasMeyer, WielandPéter, GáborPiątek, MarcinRobert, VincentRosa, Carlos A.Sampaio, José PauloSipiczki, MatthiasStadler, MarcSugita, TakashiSugiyama, JuntaTakagi, HiroshiTakashima, MasakoTurchetti, BenedettaWang, Qi MingBoekhout, Teun2022-06-01T22:26:46Z2021-07-132021-07-13T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article20application/pdfhttp://hdl.handle.net/10362/139237eng2210-6340PURE: 42840504https://doi.org/10.1186/s43008-021-00067-xinfo:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2024-03-11T05:16:33Zoai:run.unl.pt:10362/139237Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-20T03:49:22.244737Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse |
| dc.title.none.fl_str_mv |
Nomenclatural issues concerning cultured yeasts and other fungi why it is important to avoid unneeded name changes |
| title |
Nomenclatural issues concerning cultured yeasts and other fungi |
| spellingShingle |
Nomenclatural issues concerning cultured yeasts and other fungi Yurkov, Andrey Culture collection Metabolically inactive Nomenclatural type Typification Viable strains Ecology, Evolution, Behavior and Systematics Agricultural and Biological Sciences (miscellaneous) SDG 2 - Zero Hunger |
| title_short |
Nomenclatural issues concerning cultured yeasts and other fungi |
| title_full |
Nomenclatural issues concerning cultured yeasts and other fungi |
| title_fullStr |
Nomenclatural issues concerning cultured yeasts and other fungi |
| title_full_unstemmed |
Nomenclatural issues concerning cultured yeasts and other fungi |
| title_sort |
Nomenclatural issues concerning cultured yeasts and other fungi |
| author |
Yurkov, Andrey |
| author_facet |
Yurkov, Andrey Alves, Artur Bai, Feng Yan Boundy-Mills, Kyria Buzzini, Pietro Čadež, Neža Cardinali, Gianluigi Casaregola, Serge Chaturvedi, Vishnu Collin, Valérie Fell, Jack W. Girard, Victoria Groenewald, Marizeth Hagen, Ferry Hittinger, Chris Todd Kachalkin, Aleksey V. Kostrzewa, Markus Kouvelis, Vassili Libkind, Diego Liu, Xinzhan Maier, Thomas Meyer, Wieland Péter, Gábor Piątek, Marcin Robert, Vincent Rosa, Carlos A. Sampaio, José Paulo Sipiczki, Matthias Stadler, Marc Sugita, Takashi Sugiyama, Junta Takagi, Hiroshi Takashima, Masako Turchetti, Benedetta Wang, Qi Ming Boekhout, Teun |
| author_role |
author |
| author2 |
Alves, Artur Bai, Feng Yan Boundy-Mills, Kyria Buzzini, Pietro Čadež, Neža Cardinali, Gianluigi Casaregola, Serge Chaturvedi, Vishnu Collin, Valérie Fell, Jack W. Girard, Victoria Groenewald, Marizeth Hagen, Ferry Hittinger, Chris Todd Kachalkin, Aleksey V. Kostrzewa, Markus Kouvelis, Vassili Libkind, Diego Liu, Xinzhan Maier, Thomas Meyer, Wieland Péter, Gábor Piątek, Marcin Robert, Vincent Rosa, Carlos A. Sampaio, José Paulo Sipiczki, Matthias Stadler, Marc Sugita, Takashi Sugiyama, Junta Takagi, Hiroshi Takashima, Masako Turchetti, Benedetta Wang, Qi Ming Boekhout, Teun |
| author2_role |
author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author |
| dc.contributor.none.fl_str_mv |
UCIBIO - Applied Molecular Biosciences Unit DCV - Departamento de Ciências da Vida RUN |
| dc.contributor.author.fl_str_mv |
Yurkov, Andrey Alves, Artur Bai, Feng Yan Boundy-Mills, Kyria Buzzini, Pietro Čadež, Neža Cardinali, Gianluigi Casaregola, Serge Chaturvedi, Vishnu Collin, Valérie Fell, Jack W. Girard, Victoria Groenewald, Marizeth Hagen, Ferry Hittinger, Chris Todd Kachalkin, Aleksey V. Kostrzewa, Markus Kouvelis, Vassili Libkind, Diego Liu, Xinzhan Maier, Thomas Meyer, Wieland Péter, Gábor Piątek, Marcin Robert, Vincent Rosa, Carlos A. Sampaio, José Paulo Sipiczki, Matthias Stadler, Marc Sugita, Takashi Sugiyama, Junta Takagi, Hiroshi Takashima, Masako Turchetti, Benedetta Wang, Qi Ming Boekhout, Teun |
| dc.subject.por.fl_str_mv |
Culture collection Metabolically inactive Nomenclatural type Typification Viable strains Ecology, Evolution, Behavior and Systematics Agricultural and Biological Sciences (miscellaneous) SDG 2 - Zero Hunger |
| topic |
Culture collection Metabolically inactive Nomenclatural type Typification Viable strains Ecology, Evolution, Behavior and Systematics Agricultural and Biological Sciences (miscellaneous) SDG 2 - Zero Hunger |
| description |
Funding Information: MT was supported by the Institute for Fermentation Osaka (IFO), Japan. Publisher Copyright: © 2021, The Author(s). |
| publishDate |
2021 |
| dc.date.none.fl_str_mv |
2021-07-13 2021-07-13T00:00:00Z 2022-06-01T22:26:46Z |
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info:eu-repo/semantics/publishedVersion |
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info:eu-repo/semantics/article |
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article |
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publishedVersion |
| dc.identifier.uri.fl_str_mv |
http://hdl.handle.net/10362/139237 |
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http://hdl.handle.net/10362/139237 |
| dc.language.iso.fl_str_mv |
eng |
| language |
eng |
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2210-6340 PURE: 42840504 https://doi.org/10.1186/s43008-021-00067-x |
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info:eu-repo/semantics/openAccess |
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openAccess |
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20 application/pdf |
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Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação |
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RCAAP |
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