A DNA barcode reference library of Portuguese mosquitoes

Detalhes bibliográficos
Autor(a) principal: Madeira, S.
Data de Publicação: 2021
Outros Autores: Duarte, A., Boinas, F., Osório, H.C.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10400.18/8232
Resumo: Mosquitoes are important biological vectors of pathogens and species identification in all life stages is the first step for effective monitoring and control of mosquito-borne diseases. Molecular methods for species identification have been developed over the last years to overcome the limitations of the taxonomic identification based on morphology. DNA barcoding, using a fragment of the mitochondrial cytochrome oxidase I (COI) gene, can be used for species identification but a reliable and comprehensive reference database of verified sequences is required. In this study, we aimed to generate a DNA barcode reference library for the identification of mosquito species from Portuguese mosquito fauna, including most relevant vector species. Mosquitoes captured under the National Vector Surveillance Program (REVIVE) were processed for DNA extraction, COI gene fragment amplification and sequencing. Nighty-eight barcode sequences were obtained, representing 26 species and 6 genera. Sequences were submitted to GenBank and BOLD and were used for validation of phenetic classification. Barcode Index Number (BIN) assignment and Automatic Barcode Gap Discovery (ABGD) were used and clustered COI sequences into twenty-five molecular operational taxonomic units (MOTUs). This is the first comprehensive study that combines morphological and molecular identification of most mosquito species present in Portugal aiming to offer a reliable framework for mosquito species identification.
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spelling A DNA barcode reference library of Portuguese mosquitoesCulicidaeCytochrome Oxidase I (COI)DNA BarcodingMosquito SurveillancePortugalSpecies IdentificationInfecções Sistémicas e ZoonosesMosquitoes are important biological vectors of pathogens and species identification in all life stages is the first step for effective monitoring and control of mosquito-borne diseases. Molecular methods for species identification have been developed over the last years to overcome the limitations of the taxonomic identification based on morphology. DNA barcoding, using a fragment of the mitochondrial cytochrome oxidase I (COI) gene, can be used for species identification but a reliable and comprehensive reference database of verified sequences is required. In this study, we aimed to generate a DNA barcode reference library for the identification of mosquito species from Portuguese mosquito fauna, including most relevant vector species. Mosquitoes captured under the National Vector Surveillance Program (REVIVE) were processed for DNA extraction, COI gene fragment amplification and sequencing. Nighty-eight barcode sequences were obtained, representing 26 species and 6 genera. Sequences were submitted to GenBank and BOLD and were used for validation of phenetic classification. Barcode Index Number (BIN) assignment and Automatic Barcode Gap Discovery (ABGD) were used and clustered COI sequences into twenty-five molecular operational taxonomic units (MOTUs). This is the first comprehensive study that combines morphological and molecular identification of most mosquito species present in Portugal aiming to offer a reliable framework for mosquito species identification.The research was financially supported by FCT - Fundação para a Ciência e a Tecnologia, I.P., through the project grant UIDB/00276/2020 (CIISA - Centro de Investigação Interdisciplinar em Sanidade Animal, Faculdade de Medicina Veterinária, Universidade de Lisboa, Lisboa, Portugal). SM was supported by a FCT PhD fellowship SFRH/BD/117431/2016WileyRepositório Científico do Instituto Nacional de SaúdeMadeira, S.Duarte, A.Boinas, F.Osório, H.C.2022-07-12T14:40:12Z2021-08-162021-08-16T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10400.18/8232engZoonoses Public Health. 2021 Dec;68(8):926-936. doi: 10.1111/zph.12885. Epub 2021 Aug 161863-195910.1111/zph.12885info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-07-20T15:42:26ZPortal AgregadorONG
dc.title.none.fl_str_mv A DNA barcode reference library of Portuguese mosquitoes
title A DNA barcode reference library of Portuguese mosquitoes
spellingShingle A DNA barcode reference library of Portuguese mosquitoes
Madeira, S.
Culicidae
Cytochrome Oxidase I (COI)
DNA Barcoding
Mosquito Surveillance
Portugal
Species Identification
Infecções Sistémicas e Zoonoses
title_short A DNA barcode reference library of Portuguese mosquitoes
title_full A DNA barcode reference library of Portuguese mosquitoes
title_fullStr A DNA barcode reference library of Portuguese mosquitoes
title_full_unstemmed A DNA barcode reference library of Portuguese mosquitoes
title_sort A DNA barcode reference library of Portuguese mosquitoes
author Madeira, S.
author_facet Madeira, S.
Duarte, A.
Boinas, F.
Osório, H.C.
author_role author
author2 Duarte, A.
Boinas, F.
Osório, H.C.
author2_role author
author
author
dc.contributor.none.fl_str_mv Repositório Científico do Instituto Nacional de Saúde
dc.contributor.author.fl_str_mv Madeira, S.
Duarte, A.
Boinas, F.
Osório, H.C.
dc.subject.por.fl_str_mv Culicidae
Cytochrome Oxidase I (COI)
DNA Barcoding
Mosquito Surveillance
Portugal
Species Identification
Infecções Sistémicas e Zoonoses
topic Culicidae
Cytochrome Oxidase I (COI)
DNA Barcoding
Mosquito Surveillance
Portugal
Species Identification
Infecções Sistémicas e Zoonoses
description Mosquitoes are important biological vectors of pathogens and species identification in all life stages is the first step for effective monitoring and control of mosquito-borne diseases. Molecular methods for species identification have been developed over the last years to overcome the limitations of the taxonomic identification based on morphology. DNA barcoding, using a fragment of the mitochondrial cytochrome oxidase I (COI) gene, can be used for species identification but a reliable and comprehensive reference database of verified sequences is required. In this study, we aimed to generate a DNA barcode reference library for the identification of mosquito species from Portuguese mosquito fauna, including most relevant vector species. Mosquitoes captured under the National Vector Surveillance Program (REVIVE) were processed for DNA extraction, COI gene fragment amplification and sequencing. Nighty-eight barcode sequences were obtained, representing 26 species and 6 genera. Sequences were submitted to GenBank and BOLD and were used for validation of phenetic classification. Barcode Index Number (BIN) assignment and Automatic Barcode Gap Discovery (ABGD) were used and clustered COI sequences into twenty-five molecular operational taxonomic units (MOTUs). This is the first comprehensive study that combines morphological and molecular identification of most mosquito species present in Portugal aiming to offer a reliable framework for mosquito species identification.
publishDate 2021
dc.date.none.fl_str_mv 2021-08-16
2021-08-16T00:00:00Z
2022-07-12T14:40:12Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/10400.18/8232
url http://hdl.handle.net/10400.18/8232
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Zoonoses Public Health. 2021 Dec;68(8):926-936. doi: 10.1111/zph.12885. Epub 2021 Aug 16
1863-1959
10.1111/zph.12885
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Wiley
publisher.none.fl_str_mv Wiley
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
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instname_str Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
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collection Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
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