Widening the spectrum of deletions and molecular mechanisms underlying alpha-thalassemia

Detalhes bibliográficos
Autor(a) principal: Ferrão, José
Data de Publicação: 2017
Outros Autores: Silva, Marisa, Gonçalves, Lúcia, Gomes, Susana, Loureiro, Pedro, Coelho, Andreia, Miranda, Armandina, Seuanes, Filomena, Reis, Ana Batalha, Pina, Francisca, Maia, Raquel, Kjollerstrom, Paula, Monteiro, Estela, Lacerda, João F., Lavinha, João, Gonçalves, João, Faustino, Paula
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10400.18/4790
Resumo: Inherited deletions of α-globin genes and/or their upstream regulatory elements (MCSs) give rise to α-thalassemia, an autosomal recessive microcytic hypochromic anemia. In this study, Multiplex Ligation-dependent Probe Amplification performed with commercial and synthetic engineered probes, Gap-PCR, and DNA sequencing were used to characterize lesions in the subtelomeric region of the short arm of chromosome 16, possibly explaining the α-thalassemia/HbH disease phenotype in ten patients. We have found six different deletions, in heterozygosity, ranging from approximately 3.3 to 323 kb, two of them not previously described. The deletions fall into two categories: one includes deletions which totally remove the α-globin gene cluster, whereas the other includes deletions removing only the distal regulatory elements and keeping the α-globin genes structurally intact. An indel was observed in one patient involving the loss of the MCS-R2 and the insertion of 39 bp originated from a complex rearrangement spanning the deletion breakpoints. Finally, in another case no α-globin gene cluster deletion was found and the patient revealed to be a very unusual case of acquired alpha-thalassemia-myelodysplastic syndrome. This study further illustrates the diversity of genomic lesions and underlying molecular mechanisms leading to α-thalassemia.
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spelling Widening the spectrum of deletions and molecular mechanisms underlying alpha-thalassemiaATMDSAcquired HbHAlpha-thalassemiaMLPANovel DeletionsTalassemiaDoenças RarasDoenças GenéticasHemoglobinopatiasHemoglobina HMLPAInherited deletions of α-globin genes and/or their upstream regulatory elements (MCSs) give rise to α-thalassemia, an autosomal recessive microcytic hypochromic anemia. In this study, Multiplex Ligation-dependent Probe Amplification performed with commercial and synthetic engineered probes, Gap-PCR, and DNA sequencing were used to characterize lesions in the subtelomeric region of the short arm of chromosome 16, possibly explaining the α-thalassemia/HbH disease phenotype in ten patients. We have found six different deletions, in heterozygosity, ranging from approximately 3.3 to 323 kb, two of them not previously described. The deletions fall into two categories: one includes deletions which totally remove the α-globin gene cluster, whereas the other includes deletions removing only the distal regulatory elements and keeping the α-globin genes structurally intact. An indel was observed in one patient involving the loss of the MCS-R2 and the insertion of 39 bp originated from a complex rearrangement spanning the deletion breakpoints. Finally, in another case no α-globin gene cluster deletion was found and the patient revealed to be a very unusual case of acquired alpha-thalassemia-myelodysplastic syndrome. This study further illustrates the diversity of genomic lesions and underlying molecular mechanisms leading to α-thalassemia.Springer VerlagRepositório Científico do Instituto Nacional de SaúdeFerrão, JoséSilva, MarisaGonçalves, LúciaGomes, SusanaLoureiro, PedroCoelho, AndreiaMiranda, ArmandinaSeuanes, FilomenaReis, Ana BatalhaPina, FranciscaMaia, RaquelKjollerstrom, PaulaMonteiro, EstelaLacerda, João F.Lavinha, JoãoGonçalves, JoãoFaustino, Paula2018-09-01T00:30:11Z2017-09-082017-09-08T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10400.18/4790engAnn Hematol. 2017 Nov;96(11):1921-1929. doi: 10.1007/s00277-017-3090-y. Epub 2017 Sep 8.0939-5555ESSN: 1432-058410.1007/s00277-017-3090-yinfo:eu-repo/semantics/embargoedAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-07-20T15:40:33Zoai:repositorio.insa.pt:10400.18/4790Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T18:39:36.162778Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Widening the spectrum of deletions and molecular mechanisms underlying alpha-thalassemia
title Widening the spectrum of deletions and molecular mechanisms underlying alpha-thalassemia
spellingShingle Widening the spectrum of deletions and molecular mechanisms underlying alpha-thalassemia
Ferrão, José
ATMDS
Acquired HbH
Alpha-thalassemia
MLPA
Novel Deletions
Talassemia
Doenças Raras
Doenças Genéticas
Hemoglobinopatias
Hemoglobina H
MLPA
title_short Widening the spectrum of deletions and molecular mechanisms underlying alpha-thalassemia
title_full Widening the spectrum of deletions and molecular mechanisms underlying alpha-thalassemia
title_fullStr Widening the spectrum of deletions and molecular mechanisms underlying alpha-thalassemia
title_full_unstemmed Widening the spectrum of deletions and molecular mechanisms underlying alpha-thalassemia
title_sort Widening the spectrum of deletions and molecular mechanisms underlying alpha-thalassemia
author Ferrão, José
author_facet Ferrão, José
Silva, Marisa
Gonçalves, Lúcia
Gomes, Susana
Loureiro, Pedro
Coelho, Andreia
Miranda, Armandina
Seuanes, Filomena
Reis, Ana Batalha
Pina, Francisca
Maia, Raquel
Kjollerstrom, Paula
Monteiro, Estela
Lacerda, João F.
Lavinha, João
Gonçalves, João
Faustino, Paula
author_role author
author2 Silva, Marisa
Gonçalves, Lúcia
Gomes, Susana
Loureiro, Pedro
Coelho, Andreia
Miranda, Armandina
Seuanes, Filomena
Reis, Ana Batalha
Pina, Francisca
Maia, Raquel
Kjollerstrom, Paula
Monteiro, Estela
Lacerda, João F.
Lavinha, João
Gonçalves, João
Faustino, Paula
author2_role author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Repositório Científico do Instituto Nacional de Saúde
dc.contributor.author.fl_str_mv Ferrão, José
Silva, Marisa
Gonçalves, Lúcia
Gomes, Susana
Loureiro, Pedro
Coelho, Andreia
Miranda, Armandina
Seuanes, Filomena
Reis, Ana Batalha
Pina, Francisca
Maia, Raquel
Kjollerstrom, Paula
Monteiro, Estela
Lacerda, João F.
Lavinha, João
Gonçalves, João
Faustino, Paula
dc.subject.por.fl_str_mv ATMDS
Acquired HbH
Alpha-thalassemia
MLPA
Novel Deletions
Talassemia
Doenças Raras
Doenças Genéticas
Hemoglobinopatias
Hemoglobina H
MLPA
topic ATMDS
Acquired HbH
Alpha-thalassemia
MLPA
Novel Deletions
Talassemia
Doenças Raras
Doenças Genéticas
Hemoglobinopatias
Hemoglobina H
MLPA
description Inherited deletions of α-globin genes and/or their upstream regulatory elements (MCSs) give rise to α-thalassemia, an autosomal recessive microcytic hypochromic anemia. In this study, Multiplex Ligation-dependent Probe Amplification performed with commercial and synthetic engineered probes, Gap-PCR, and DNA sequencing were used to characterize lesions in the subtelomeric region of the short arm of chromosome 16, possibly explaining the α-thalassemia/HbH disease phenotype in ten patients. We have found six different deletions, in heterozygosity, ranging from approximately 3.3 to 323 kb, two of them not previously described. The deletions fall into two categories: one includes deletions which totally remove the α-globin gene cluster, whereas the other includes deletions removing only the distal regulatory elements and keeping the α-globin genes structurally intact. An indel was observed in one patient involving the loss of the MCS-R2 and the insertion of 39 bp originated from a complex rearrangement spanning the deletion breakpoints. Finally, in another case no α-globin gene cluster deletion was found and the patient revealed to be a very unusual case of acquired alpha-thalassemia-myelodysplastic syndrome. This study further illustrates the diversity of genomic lesions and underlying molecular mechanisms leading to α-thalassemia.
publishDate 2017
dc.date.none.fl_str_mv 2017-09-08
2017-09-08T00:00:00Z
2018-09-01T00:30:11Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/10400.18/4790
url http://hdl.handle.net/10400.18/4790
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Ann Hematol. 2017 Nov;96(11):1921-1929. doi: 10.1007/s00277-017-3090-y. Epub 2017 Sep 8.
0939-5555
ESSN: 1432-0584
10.1007/s00277-017-3090-y
dc.rights.driver.fl_str_mv info:eu-repo/semantics/embargoedAccess
eu_rights_str_mv embargoedAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Springer Verlag
publisher.none.fl_str_mv Springer Verlag
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