Automatic tracking of labeled red blood cells in microchannels

Detalhes bibliográficos
Autor(a) principal: Pinho, Diana
Data de Publicação: 2013
Outros Autores: Lima, Rui A., Pereira, Ana I., Gayubo, Fernando
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10198/10355
Resumo: The current study proposes an automatic method for the segmentation and tracking of red blood cells flowing through a 100- m glass capillary. The original images were obtained by means of a confocal system and then processed in MATLAB using the Image Processing Toolbox. The measurements obtained with the proposed automatic method were compared with the results determined by a manual tracking method. The comparison was performed by using both linear regressions and Bland–Altman analysis. The results have shown a good agreement between the two methods. Therefore, the proposed automatic method is a powerful way to provide rapid and accurate measurements for in vitro blood experiments in microchannels.
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spelling Automatic tracking of labeled red blood cells in microchannelsImage analysisAutomatic methodRed blood cellsIn vitro blood flowThe current study proposes an automatic method for the segmentation and tracking of red blood cells flowing through a 100- m glass capillary. The original images were obtained by means of a confocal system and then processed in MATLAB using the Image Processing Toolbox. The measurements obtained with the proposed automatic method were compared with the results determined by a manual tracking method. The comparison was performed by using both linear regressions and Bland–Altman analysis. The results have shown a good agreement between the two methods. Therefore, the proposed automatic method is a powerful way to provide rapid and accurate measurements for in vitro blood experiments in microchannels.The authors acknowledge the financial support provided by: Student Mobility Placements with the program Lifelong Learning(Erasmus Program), PTDC/SAUBEB/108728/2008, PTDC/SAU-BEB/105650/2008, PTDC/EMEMFE/099109/2008 and PTDC/SAU-ENB/116929/2010 from the FCT (Science and Technology Foundation) and COMPETE, Portugal.John Wiley & SonsBiblioteca Digital do IPBPinho, DianaLima, Rui A.Pereira, Ana I.Gayubo, Fernando2014-09-08T14:17:44Z20132013-01-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10198/10355engPinho, D.; Lima, R.; Pereira, Ana I.; Gayubo, F. (2013). Automatic tracking of labeled red blood cells in microchannels. International Journal for Numerical Methods in Biomedical Engineering. ISSN 2040-7947. 29, p. 977-98710.1002/cnm.2526info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-11-21T10:24:22Zoai:bibliotecadigital.ipb.pt:10198/10355Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T23:01:09.310789Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Automatic tracking of labeled red blood cells in microchannels
title Automatic tracking of labeled red blood cells in microchannels
spellingShingle Automatic tracking of labeled red blood cells in microchannels
Pinho, Diana
Image analysis
Automatic method
Red blood cells
In vitro blood flow
title_short Automatic tracking of labeled red blood cells in microchannels
title_full Automatic tracking of labeled red blood cells in microchannels
title_fullStr Automatic tracking of labeled red blood cells in microchannels
title_full_unstemmed Automatic tracking of labeled red blood cells in microchannels
title_sort Automatic tracking of labeled red blood cells in microchannels
author Pinho, Diana
author_facet Pinho, Diana
Lima, Rui A.
Pereira, Ana I.
Gayubo, Fernando
author_role author
author2 Lima, Rui A.
Pereira, Ana I.
Gayubo, Fernando
author2_role author
author
author
dc.contributor.none.fl_str_mv Biblioteca Digital do IPB
dc.contributor.author.fl_str_mv Pinho, Diana
Lima, Rui A.
Pereira, Ana I.
Gayubo, Fernando
dc.subject.por.fl_str_mv Image analysis
Automatic method
Red blood cells
In vitro blood flow
topic Image analysis
Automatic method
Red blood cells
In vitro blood flow
description The current study proposes an automatic method for the segmentation and tracking of red blood cells flowing through a 100- m glass capillary. The original images were obtained by means of a confocal system and then processed in MATLAB using the Image Processing Toolbox. The measurements obtained with the proposed automatic method were compared with the results determined by a manual tracking method. The comparison was performed by using both linear regressions and Bland–Altman analysis. The results have shown a good agreement between the two methods. Therefore, the proposed automatic method is a powerful way to provide rapid and accurate measurements for in vitro blood experiments in microchannels.
publishDate 2013
dc.date.none.fl_str_mv 2013
2013-01-01T00:00:00Z
2014-09-08T14:17:44Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/10198/10355
url http://hdl.handle.net/10198/10355
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Pinho, D.; Lima, R.; Pereira, Ana I.; Gayubo, F. (2013). Automatic tracking of labeled red blood cells in microchannels. International Journal for Numerical Methods in Biomedical Engineering. ISSN 2040-7947. 29, p. 977-987
10.1002/cnm.2526
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
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dc.publisher.none.fl_str_mv John Wiley & Sons
publisher.none.fl_str_mv John Wiley & Sons
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron:RCAAP
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reponame_str Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
collection Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
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