Aquatic hyphomycete taxonomic relatedness translates into lower genetic divergence of the nitrate reductase gene

Detalhes bibliográficos
Autor(a) principal: Mariz, Joana
Data de Publicação: 2021
Outros Autores: Franco-Duarte, Ricardo, Cássio, Fernanda, Pascoal, Cláudia, Fernandes, Isabel Rodrigues
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: https://hdl.handle.net/1822/77696
Resumo: Aquatic hyphomycetes are key microbial decomposers in freshwater that are capable of producing extracellular enzymes targeting complex molecules of leaf litter, thus, being crucial to nutrient cycling in these ecosystems. These fungi are also able to assimilate nutrients (e.g., nitrogen) from stream water, immobilizing these nutrients in the decomposing leaf litter and increasing its nutritional value for higher trophic levels. Evaluating the aquatic hyphomycete functional genetic diversity is, thus, pivotal to understanding the potential impacts of biodiversity loss on nutrient cycling in freshwater. In this work, the inter- and intraspecific taxonomic (ITS1-5.8S-ITS2 region) and functional (nitrate reductase gene) diversity of 40 aquatic hyphomycete strains, belonging to 23 species, was evaluated. A positive correlation was found between the taxonomic and nitrate reductase gene divergences. Interestingly, some cases challenged this trend: <i>Dactylella cylindrospora</i> (Orbiliomycetes) and <i>Thelonectria rubi</i> (Sordariomycetes), which were phylogenetically identical but highly divergent regarding the nitrate reductase gene; and <i>Collembolispora barbata (incertae sedis)</i> and <i>Tetracladium apiense</i> (Leotiomycetes), which exhibited moderate taxonomic divergence but no divergence in the nitrate reductase gene. Additionally, <i>Tricladium chaetocladium</i> (Leotiomycetes) strains were phylogenetically identical but displayed a degree of nitrate reductase gene divergence above the average for the interspecific level. Overall, both inter- and intraspecific functional diversity were observed among aquatic hyphomycetes.
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spelling Aquatic hyphomycete taxonomic relatedness translates into lower genetic divergence of the nitrate reductase geneAquatic hyphomycetesBiodiversityEnzymesFunctional geneFreshwater ecosystemsLeaf litter decompositionScience & TechnologyAquatic hyphomycetes are key microbial decomposers in freshwater that are capable of producing extracellular enzymes targeting complex molecules of leaf litter, thus, being crucial to nutrient cycling in these ecosystems. These fungi are also able to assimilate nutrients (e.g., nitrogen) from stream water, immobilizing these nutrients in the decomposing leaf litter and increasing its nutritional value for higher trophic levels. Evaluating the aquatic hyphomycete functional genetic diversity is, thus, pivotal to understanding the potential impacts of biodiversity loss on nutrient cycling in freshwater. In this work, the inter- and intraspecific taxonomic (ITS1-5.8S-ITS2 region) and functional (nitrate reductase gene) diversity of 40 aquatic hyphomycete strains, belonging to 23 species, was evaluated. A positive correlation was found between the taxonomic and nitrate reductase gene divergences. Interestingly, some cases challenged this trend: <i>Dactylella cylindrospora</i> (Orbiliomycetes) and <i>Thelonectria rubi</i> (Sordariomycetes), which were phylogenetically identical but highly divergent regarding the nitrate reductase gene; and <i>Collembolispora barbata (incertae sedis)</i> and <i>Tetracladium apiense</i> (Leotiomycetes), which exhibited moderate taxonomic divergence but no divergence in the nitrate reductase gene. Additionally, <i>Tricladium chaetocladium</i> (Leotiomycetes) strains were phylogenetically identical but displayed a degree of nitrate reductase gene divergence above the average for the interspecific level. Overall, both inter- and intraspecific functional diversity were observed among aquatic hyphomycetes.This work was supported by the “Contrato-Programa” UIDB/04050/2020 funded by national funds through the Portuguese Foundation for Science and Technology (FCT) I.P and by the project STREAMECO-Biodiversity and eco-system functioning under climate change: from the gene to the stream: PTDC/CTA-AMB/31245/2017 funded by FCT.Multidisciplinary Digital Publishing Institute (MDPI)Universidade do MinhoMariz, JoanaFranco-Duarte, RicardoCássio, FernandaPascoal, CláudiaFernandes, Isabel Rodrigues2021-12-112021-12-11T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttps://hdl.handle.net/1822/77696engMariz, J.; Franco-Duarte, R.; Cássio, F.; Pascoal, C.; Fernandes, I. Aquatic Hyphomycete Taxonomic Relatedness Translates into Lower Genetic Divergence of the Nitrate Reductase Gene. J. Fungi 2021, 7, 1066. https://doi.org/10.3390/jof71210662309-608X10.3390/jof71210661066https://www.mdpi.com/2309-608X/7/12/1066info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-07-21T12:34:42Zoai:repositorium.sdum.uminho.pt:1822/77696Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T19:30:25.667930Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Aquatic hyphomycete taxonomic relatedness translates into lower genetic divergence of the nitrate reductase gene
title Aquatic hyphomycete taxonomic relatedness translates into lower genetic divergence of the nitrate reductase gene
spellingShingle Aquatic hyphomycete taxonomic relatedness translates into lower genetic divergence of the nitrate reductase gene
Mariz, Joana
Aquatic hyphomycetes
Biodiversity
Enzymes
Functional gene
Freshwater ecosystems
Leaf litter decomposition
Science & Technology
title_short Aquatic hyphomycete taxonomic relatedness translates into lower genetic divergence of the nitrate reductase gene
title_full Aquatic hyphomycete taxonomic relatedness translates into lower genetic divergence of the nitrate reductase gene
title_fullStr Aquatic hyphomycete taxonomic relatedness translates into lower genetic divergence of the nitrate reductase gene
title_full_unstemmed Aquatic hyphomycete taxonomic relatedness translates into lower genetic divergence of the nitrate reductase gene
title_sort Aquatic hyphomycete taxonomic relatedness translates into lower genetic divergence of the nitrate reductase gene
author Mariz, Joana
author_facet Mariz, Joana
Franco-Duarte, Ricardo
Cássio, Fernanda
Pascoal, Cláudia
Fernandes, Isabel Rodrigues
author_role author
author2 Franco-Duarte, Ricardo
Cássio, Fernanda
Pascoal, Cláudia
Fernandes, Isabel Rodrigues
author2_role author
author
author
author
dc.contributor.none.fl_str_mv Universidade do Minho
dc.contributor.author.fl_str_mv Mariz, Joana
Franco-Duarte, Ricardo
Cássio, Fernanda
Pascoal, Cláudia
Fernandes, Isabel Rodrigues
dc.subject.por.fl_str_mv Aquatic hyphomycetes
Biodiversity
Enzymes
Functional gene
Freshwater ecosystems
Leaf litter decomposition
Science & Technology
topic Aquatic hyphomycetes
Biodiversity
Enzymes
Functional gene
Freshwater ecosystems
Leaf litter decomposition
Science & Technology
description Aquatic hyphomycetes are key microbial decomposers in freshwater that are capable of producing extracellular enzymes targeting complex molecules of leaf litter, thus, being crucial to nutrient cycling in these ecosystems. These fungi are also able to assimilate nutrients (e.g., nitrogen) from stream water, immobilizing these nutrients in the decomposing leaf litter and increasing its nutritional value for higher trophic levels. Evaluating the aquatic hyphomycete functional genetic diversity is, thus, pivotal to understanding the potential impacts of biodiversity loss on nutrient cycling in freshwater. In this work, the inter- and intraspecific taxonomic (ITS1-5.8S-ITS2 region) and functional (nitrate reductase gene) diversity of 40 aquatic hyphomycete strains, belonging to 23 species, was evaluated. A positive correlation was found between the taxonomic and nitrate reductase gene divergences. Interestingly, some cases challenged this trend: <i>Dactylella cylindrospora</i> (Orbiliomycetes) and <i>Thelonectria rubi</i> (Sordariomycetes), which were phylogenetically identical but highly divergent regarding the nitrate reductase gene; and <i>Collembolispora barbata (incertae sedis)</i> and <i>Tetracladium apiense</i> (Leotiomycetes), which exhibited moderate taxonomic divergence but no divergence in the nitrate reductase gene. Additionally, <i>Tricladium chaetocladium</i> (Leotiomycetes) strains were phylogenetically identical but displayed a degree of nitrate reductase gene divergence above the average for the interspecific level. Overall, both inter- and intraspecific functional diversity were observed among aquatic hyphomycetes.
publishDate 2021
dc.date.none.fl_str_mv 2021-12-11
2021-12-11T00:00:00Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv https://hdl.handle.net/1822/77696
url https://hdl.handle.net/1822/77696
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Mariz, J.; Franco-Duarte, R.; Cássio, F.; Pascoal, C.; Fernandes, I. Aquatic Hyphomycete Taxonomic Relatedness Translates into Lower Genetic Divergence of the Nitrate Reductase Gene. J. Fungi 2021, 7, 1066. https://doi.org/10.3390/jof7121066
2309-608X
10.3390/jof7121066
1066
https://www.mdpi.com/2309-608X/7/12/1066
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Multidisciplinary Digital Publishing Institute (MDPI)
publisher.none.fl_str_mv Multidisciplinary Digital Publishing Institute (MDPI)
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
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