A cancer specific hypermethylation signature of the TERT promoter predicts biochemical relapse in prostate cancer: a retrospective cohort study

Detalhes bibliográficos
Autor(a) principal: Castelo Branco, Pedro
Data de Publicação: 2016
Outros Autores: Leão, Ricardo, Lipman, Tatiana, Campbell, Brittany, Lee, Donghyun, Price, Aryeh, Zhang, Cindy, Heidari, Abolfazl, Stephens, Derek, Boerno, Stefan, Coelho, Hugo, Gomes, Ana, Domingos, Celia, Apolonio, Joana D, Schäfer, Georg, Bristow, Robert G, Schweiger, Michal R, Hamilton, Robert, Zlotta, Alexandre, Figueiredo, Arnaldo, Klocker, Helmut, Sültmann, Holger, Tabori, Uri
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10316/108733
https://doi.org/10.18632/oncotarget.10639
Resumo: The identification of new biomarkers to differentiate between indolent and aggressive prostate tumors is an important unmet need. We examined the role of THOR (TERT Hypermethylated Oncological Region) as a diagnostic and prognostic biomarker in prostate cancer (PCa).We analyzed THOR in common cancers using genome-wide methylation arrays. Methylation status of the whole TERT gene in benign and malignant prostate samples was determined by MeDIP-Seq. The prognostic role of THOR in PCa was assessed by pyrosequencing on discovery and validation cohorts from patients who underwent radical prostatectomy with long-term follow-up data.Most cancers (n = 3056) including PCa (n = 300) exhibited hypermethylation of THOR. THOR was the only region within the TERT gene that is differentially methylated between normal and malignant prostate tissue (p < 0.0001). Also, THOR was significantly hypermethylated in PCa when compared to paired benign tissues (n = 164, p < 0.0001). THOR hypermethylation correlated with Gleason scores and was associated with tumor invasiveness (p = 0.0147). Five years biochemical progression free survival (BPFS) for PCa patients in the discovery cohort was 87% (95% CI 73-100) and 65% (95% CI 52-78) for THOR non-hypermethylated and hypermethylated cancers respectively (p = 0.01). Similar differences in BPFS were noted in the validation cohort (p = 0.03). Importantly, THOR was able to predict outcome in the challenging (Gleason 6 and 7 (3 + 4)) PCa (p = 0.007). For this group, THOR was an independent risk factor for BPFS with a hazard-ratio of 3.685 (p = 0.0247). Finally, THOR hypermethylation more than doubled the risk of recurrence across all PSA levels (OR 2.5, p = 0.02).
id RCAP_f9930ee579588e389e84a25164eda9da
oai_identifier_str oai:estudogeral.uc.pt:10316/108733
network_acronym_str RCAP
network_name_str Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
repository_id_str 7160
spelling A cancer specific hypermethylation signature of the TERT promoter predicts biochemical relapse in prostate cancer: a retrospective cohort studyTERTprostate cancerbiomarkerdiagnosticGleason scoreAgedBiomarkers, TumorCell DifferentiationDNA MethylationEpigenesis, GeneticFollow-Up StudiesGene Expression Regulation, NeoplasticHumansMaleMiddle AgedNeoplasm Recurrence, LocalPrognosisProportional Hazards ModelsProstatectomyProstatic NeoplasmsRetrospective StudiesTelomeraseThe identification of new biomarkers to differentiate between indolent and aggressive prostate tumors is an important unmet need. We examined the role of THOR (TERT Hypermethylated Oncological Region) as a diagnostic and prognostic biomarker in prostate cancer (PCa).We analyzed THOR in common cancers using genome-wide methylation arrays. Methylation status of the whole TERT gene in benign and malignant prostate samples was determined by MeDIP-Seq. The prognostic role of THOR in PCa was assessed by pyrosequencing on discovery and validation cohorts from patients who underwent radical prostatectomy with long-term follow-up data.Most cancers (n = 3056) including PCa (n = 300) exhibited hypermethylation of THOR. THOR was the only region within the TERT gene that is differentially methylated between normal and malignant prostate tissue (p < 0.0001). Also, THOR was significantly hypermethylated in PCa when compared to paired benign tissues (n = 164, p < 0.0001). THOR hypermethylation correlated with Gleason scores and was associated with tumor invasiveness (p = 0.0147). Five years biochemical progression free survival (BPFS) for PCa patients in the discovery cohort was 87% (95% CI 73-100) and 65% (95% CI 52-78) for THOR non-hypermethylated and hypermethylated cancers respectively (p = 0.01). Similar differences in BPFS were noted in the validation cohort (p = 0.03). Importantly, THOR was able to predict outcome in the challenging (Gleason 6 and 7 (3 + 4)) PCa (p = 0.007). For this group, THOR was an independent risk factor for BPFS with a hazard-ratio of 3.685 (p = 0.0247). Finally, THOR hypermethylation more than doubled the risk of recurrence across all PSA levels (OR 2.5, p = 0.02).Impact Journals2016-09-06info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttp://hdl.handle.net/10316/108733http://hdl.handle.net/10316/108733https://doi.org/10.18632/oncotarget.10639eng1949-2553Castelo Branco, PedroLeão, RicardoLipman, TatianaCampbell, BrittanyLee, DonghyunPrice, AryehZhang, CindyHeidari, AbolfazlStephens, DerekBoerno, StefanCoelho, HugoGomes, AnaDomingos, CeliaApolonio, Joana DSchäfer, GeorgBristow, Robert GSchweiger, Michal RHamilton, RobertZlotta, AlexandreFigueiredo, ArnaldoKlocker, HelmutSültmann, HolgerTabori, Uriinfo:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-09-11T10:31:43Zoai:estudogeral.uc.pt:10316/108733Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T21:25:00.212158Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv A cancer specific hypermethylation signature of the TERT promoter predicts biochemical relapse in prostate cancer: a retrospective cohort study
title A cancer specific hypermethylation signature of the TERT promoter predicts biochemical relapse in prostate cancer: a retrospective cohort study
spellingShingle A cancer specific hypermethylation signature of the TERT promoter predicts biochemical relapse in prostate cancer: a retrospective cohort study
Castelo Branco, Pedro
TERT
prostate cancer
biomarker
diagnostic
Gleason score
Aged
Biomarkers, Tumor
Cell Differentiation
DNA Methylation
Epigenesis, Genetic
Follow-Up Studies
Gene Expression Regulation, Neoplastic
Humans
Male
Middle Aged
Neoplasm Recurrence, Local
Prognosis
Proportional Hazards Models
Prostatectomy
Prostatic Neoplasms
Retrospective Studies
Telomerase
title_short A cancer specific hypermethylation signature of the TERT promoter predicts biochemical relapse in prostate cancer: a retrospective cohort study
title_full A cancer specific hypermethylation signature of the TERT promoter predicts biochemical relapse in prostate cancer: a retrospective cohort study
title_fullStr A cancer specific hypermethylation signature of the TERT promoter predicts biochemical relapse in prostate cancer: a retrospective cohort study
title_full_unstemmed A cancer specific hypermethylation signature of the TERT promoter predicts biochemical relapse in prostate cancer: a retrospective cohort study
title_sort A cancer specific hypermethylation signature of the TERT promoter predicts biochemical relapse in prostate cancer: a retrospective cohort study
author Castelo Branco, Pedro
author_facet Castelo Branco, Pedro
Leão, Ricardo
Lipman, Tatiana
Campbell, Brittany
Lee, Donghyun
Price, Aryeh
Zhang, Cindy
Heidari, Abolfazl
Stephens, Derek
Boerno, Stefan
Coelho, Hugo
Gomes, Ana
Domingos, Celia
Apolonio, Joana D
Schäfer, Georg
Bristow, Robert G
Schweiger, Michal R
Hamilton, Robert
Zlotta, Alexandre
Figueiredo, Arnaldo
Klocker, Helmut
Sültmann, Holger
Tabori, Uri
author_role author
author2 Leão, Ricardo
Lipman, Tatiana
Campbell, Brittany
Lee, Donghyun
Price, Aryeh
Zhang, Cindy
Heidari, Abolfazl
Stephens, Derek
Boerno, Stefan
Coelho, Hugo
Gomes, Ana
Domingos, Celia
Apolonio, Joana D
Schäfer, Georg
Bristow, Robert G
Schweiger, Michal R
Hamilton, Robert
Zlotta, Alexandre
Figueiredo, Arnaldo
Klocker, Helmut
Sültmann, Holger
Tabori, Uri
author2_role author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Castelo Branco, Pedro
Leão, Ricardo
Lipman, Tatiana
Campbell, Brittany
Lee, Donghyun
Price, Aryeh
Zhang, Cindy
Heidari, Abolfazl
Stephens, Derek
Boerno, Stefan
Coelho, Hugo
Gomes, Ana
Domingos, Celia
Apolonio, Joana D
Schäfer, Georg
Bristow, Robert G
Schweiger, Michal R
Hamilton, Robert
Zlotta, Alexandre
Figueiredo, Arnaldo
Klocker, Helmut
Sültmann, Holger
Tabori, Uri
dc.subject.por.fl_str_mv TERT
prostate cancer
biomarker
diagnostic
Gleason score
Aged
Biomarkers, Tumor
Cell Differentiation
DNA Methylation
Epigenesis, Genetic
Follow-Up Studies
Gene Expression Regulation, Neoplastic
Humans
Male
Middle Aged
Neoplasm Recurrence, Local
Prognosis
Proportional Hazards Models
Prostatectomy
Prostatic Neoplasms
Retrospective Studies
Telomerase
topic TERT
prostate cancer
biomarker
diagnostic
Gleason score
Aged
Biomarkers, Tumor
Cell Differentiation
DNA Methylation
Epigenesis, Genetic
Follow-Up Studies
Gene Expression Regulation, Neoplastic
Humans
Male
Middle Aged
Neoplasm Recurrence, Local
Prognosis
Proportional Hazards Models
Prostatectomy
Prostatic Neoplasms
Retrospective Studies
Telomerase
description The identification of new biomarkers to differentiate between indolent and aggressive prostate tumors is an important unmet need. We examined the role of THOR (TERT Hypermethylated Oncological Region) as a diagnostic and prognostic biomarker in prostate cancer (PCa).We analyzed THOR in common cancers using genome-wide methylation arrays. Methylation status of the whole TERT gene in benign and malignant prostate samples was determined by MeDIP-Seq. The prognostic role of THOR in PCa was assessed by pyrosequencing on discovery and validation cohorts from patients who underwent radical prostatectomy with long-term follow-up data.Most cancers (n = 3056) including PCa (n = 300) exhibited hypermethylation of THOR. THOR was the only region within the TERT gene that is differentially methylated between normal and malignant prostate tissue (p < 0.0001). Also, THOR was significantly hypermethylated in PCa when compared to paired benign tissues (n = 164, p < 0.0001). THOR hypermethylation correlated with Gleason scores and was associated with tumor invasiveness (p = 0.0147). Five years biochemical progression free survival (BPFS) for PCa patients in the discovery cohort was 87% (95% CI 73-100) and 65% (95% CI 52-78) for THOR non-hypermethylated and hypermethylated cancers respectively (p = 0.01). Similar differences in BPFS were noted in the validation cohort (p = 0.03). Importantly, THOR was able to predict outcome in the challenging (Gleason 6 and 7 (3 + 4)) PCa (p = 0.007). For this group, THOR was an independent risk factor for BPFS with a hazard-ratio of 3.685 (p = 0.0247). Finally, THOR hypermethylation more than doubled the risk of recurrence across all PSA levels (OR 2.5, p = 0.02).
publishDate 2016
dc.date.none.fl_str_mv 2016-09-06
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/10316/108733
http://hdl.handle.net/10316/108733
https://doi.org/10.18632/oncotarget.10639
url http://hdl.handle.net/10316/108733
https://doi.org/10.18632/oncotarget.10639
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 1949-2553
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.publisher.none.fl_str_mv Impact Journals
publisher.none.fl_str_mv Impact Journals
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron:RCAAP
instname_str Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron_str RCAAP
institution RCAAP
reponame_str Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
collection Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
repository.name.fl_str_mv Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
repository.mail.fl_str_mv
_version_ 1799134133708914688