Ethylene response factors gene regulation and expression profiles under different stresses in rice

Detalhes bibliográficos
Autor(a) principal: Pegoraro,Camila
Data de Publicação: 2013
Outros Autores: Farias,Daniel da Rosa, Mertz,Liliane Marcia, Santos,Railson Schreinert dos, Maia,Luciano Carlos da, Rombaldi,Cesar Valmor, Oliveira,Antonio Costa de
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Theoretical and Experimental Plant Physiology
Texto Completo: http://old.scielo.br/scielo.php?script=sci_arttext&pid=S2197-00252013000400004
Resumo: Stresses can cause large yield reductions in cultivated plants. The response to these stresses occurs via a plethora of signalling pathways, where a large number of genes is induced or repressed. Among the environmental stress responsive genes, there are the members of the ethylene response factors (ERF) gene family. The mRNA levels of different ERF are regulated by many hormones and molecules produced under different stress conditions. In this study, with the goal of identifying the response of rice ERF genes to environmental stress, it was analysed the transcriptional expression profile of 114 of these genes under stress by anoxia, salt and Magnaporthe grisea. Also, aiming to characterize how the regulation of ERF genes occurs, the amount of known cis regulatory elements in the promoter region of these genes and their association with the expression profiles under the tested conditions were also assessed. The results indicate that some ERF members present the same specific expression profiles under different environmental stresses, while others do not. Within the ERF family, the regulation of gene expression is complex for some genes which have many cis elements in their promoters, but simple for others, demonstrating high levels of divergence among them. The findings demonstrate the importance of the study of each ERF separately, since it is not possible to establish general rules for regulation and probably for the function of these genes.
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spelling Ethylene response factors gene regulation and expression profiles under different stresses in riceOryza sativatranscriptioncis elementsenvironmental stressesStresses can cause large yield reductions in cultivated plants. The response to these stresses occurs via a plethora of signalling pathways, where a large number of genes is induced or repressed. Among the environmental stress responsive genes, there are the members of the ethylene response factors (ERF) gene family. The mRNA levels of different ERF are regulated by many hormones and molecules produced under different stress conditions. In this study, with the goal of identifying the response of rice ERF genes to environmental stress, it was analysed the transcriptional expression profile of 114 of these genes under stress by anoxia, salt and Magnaporthe grisea. Also, aiming to characterize how the regulation of ERF genes occurs, the amount of known cis regulatory elements in the promoter region of these genes and their association with the expression profiles under the tested conditions were also assessed. The results indicate that some ERF members present the same specific expression profiles under different environmental stresses, while others do not. Within the ERF family, the regulation of gene expression is complex for some genes which have many cis elements in their promoters, but simple for others, demonstrating high levels of divergence among them. The findings demonstrate the importance of the study of each ERF separately, since it is not possible to establish general rules for regulation and probably for the function of these genes.Sociedade Brasileira de Fisiologia Vegetal2013-12-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S2197-00252013000400004Theoretical and Experimental Plant Physiology v.25 n.4 2013reponame:Theoretical and Experimental Plant Physiologyinstname:Sociedade Brasileira de Fisiologia Vegetal (SBFV)instacron:SBFV10.1590/S2197-00252013000400004info:eu-repo/semantics/openAccessPegoraro,CamilaFarias,Daniel da RosaMertz,Liliane MarciaSantos,Railson Schreinert dosMaia,Luciano Carlos daRombaldi,Cesar ValmorOliveira,Antonio Costa deeng2014-02-10T00:00:00Zoai:scielo:S2197-00252013000400004Revistahttps://www.springer.com/journal/40626ONGhttps://old.scielo.br/oai/scielo-oai.php||bjpp.sbfv@gmail.com2197-00252197-0025opendoar:2014-02-10T00:00Theoretical and Experimental Plant Physiology - Sociedade Brasileira de Fisiologia Vegetal (SBFV)false
dc.title.none.fl_str_mv Ethylene response factors gene regulation and expression profiles under different stresses in rice
title Ethylene response factors gene regulation and expression profiles under different stresses in rice
spellingShingle Ethylene response factors gene regulation and expression profiles under different stresses in rice
Pegoraro,Camila
Oryza sativa
transcription
cis elements
environmental stresses
title_short Ethylene response factors gene regulation and expression profiles under different stresses in rice
title_full Ethylene response factors gene regulation and expression profiles under different stresses in rice
title_fullStr Ethylene response factors gene regulation and expression profiles under different stresses in rice
title_full_unstemmed Ethylene response factors gene regulation and expression profiles under different stresses in rice
title_sort Ethylene response factors gene regulation and expression profiles under different stresses in rice
author Pegoraro,Camila
author_facet Pegoraro,Camila
Farias,Daniel da Rosa
Mertz,Liliane Marcia
Santos,Railson Schreinert dos
Maia,Luciano Carlos da
Rombaldi,Cesar Valmor
Oliveira,Antonio Costa de
author_role author
author2 Farias,Daniel da Rosa
Mertz,Liliane Marcia
Santos,Railson Schreinert dos
Maia,Luciano Carlos da
Rombaldi,Cesar Valmor
Oliveira,Antonio Costa de
author2_role author
author
author
author
author
author
dc.contributor.author.fl_str_mv Pegoraro,Camila
Farias,Daniel da Rosa
Mertz,Liliane Marcia
Santos,Railson Schreinert dos
Maia,Luciano Carlos da
Rombaldi,Cesar Valmor
Oliveira,Antonio Costa de
dc.subject.por.fl_str_mv Oryza sativa
transcription
cis elements
environmental stresses
topic Oryza sativa
transcription
cis elements
environmental stresses
description Stresses can cause large yield reductions in cultivated plants. The response to these stresses occurs via a plethora of signalling pathways, where a large number of genes is induced or repressed. Among the environmental stress responsive genes, there are the members of the ethylene response factors (ERF) gene family. The mRNA levels of different ERF are regulated by many hormones and molecules produced under different stress conditions. In this study, with the goal of identifying the response of rice ERF genes to environmental stress, it was analysed the transcriptional expression profile of 114 of these genes under stress by anoxia, salt and Magnaporthe grisea. Also, aiming to characterize how the regulation of ERF genes occurs, the amount of known cis regulatory elements in the promoter region of these genes and their association with the expression profiles under the tested conditions were also assessed. The results indicate that some ERF members present the same specific expression profiles under different environmental stresses, while others do not. Within the ERF family, the regulation of gene expression is complex for some genes which have many cis elements in their promoters, but simple for others, demonstrating high levels of divergence among them. The findings demonstrate the importance of the study of each ERF separately, since it is not possible to establish general rules for regulation and probably for the function of these genes.
publishDate 2013
dc.date.none.fl_str_mv 2013-12-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://old.scielo.br/scielo.php?script=sci_arttext&pid=S2197-00252013000400004
url http://old.scielo.br/scielo.php?script=sci_arttext&pid=S2197-00252013000400004
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 10.1590/S2197-00252013000400004
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv text/html
dc.publisher.none.fl_str_mv Sociedade Brasileira de Fisiologia Vegetal
publisher.none.fl_str_mv Sociedade Brasileira de Fisiologia Vegetal
dc.source.none.fl_str_mv Theoretical and Experimental Plant Physiology v.25 n.4 2013
reponame:Theoretical and Experimental Plant Physiology
instname:Sociedade Brasileira de Fisiologia Vegetal (SBFV)
instacron:SBFV
instname_str Sociedade Brasileira de Fisiologia Vegetal (SBFV)
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institution SBFV
reponame_str Theoretical and Experimental Plant Physiology
collection Theoretical and Experimental Plant Physiology
repository.name.fl_str_mv Theoretical and Experimental Plant Physiology - Sociedade Brasileira de Fisiologia Vegetal (SBFV)
repository.mail.fl_str_mv ||bjpp.sbfv@gmail.com
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