The first complete plastome of Mimusops coriacea (A. DC.) Miq. (Sapotaceae)

Detalhes bibliográficos
Autor(a) principal: Trad,Rafaela Jorge
Data de Publicação: 2022
Outros Autores: Silva,Saura Rodrigues da, Amaral,Maria do Carmo Estanislau do
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Genetics and Molecular Biology
Texto Completo: http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572022000100302
Resumo: Abstract Mimusops coriacea (A. DC.) Miq. (Sapotoideae, Sapotaceae, Ericales) is native to Madagascar and the Comoro Islands. This species is cultivated in many countries around the world and grows on sand in coastal vegetation. Here we sequenced, assembled, and annotated the first complete chloroplast genome of M. coriacea. The newly assembled chloroplast was analyzed with other available chloroplasts of Sapotaceae. Our results found a general conserved structure. The complete chloroplast genome has 159,689 bp, including 133 genes distributed in four regions: a large single-copy region of 88,887 bp, a small single-copy region of 18,618 bp, and two inverted repeats of 26,092 bp each. Our maximum likelihood phylogenetic tree was generated with 80 protein-coding genes and recovered a monophyletic Sapotaceae sister to a clade formed by Ebenaceae + Primulaceae. In our analysis, Mimusops coriacea clustered with the other eight species of Sapotaceae included in the study.
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spelling The first complete plastome of Mimusops coriacea (A. DC.) Miq. (Sapotaceae)Ericalescomplete chloroplast genomeSapotoideaeAbstract Mimusops coriacea (A. DC.) Miq. (Sapotoideae, Sapotaceae, Ericales) is native to Madagascar and the Comoro Islands. This species is cultivated in many countries around the world and grows on sand in coastal vegetation. Here we sequenced, assembled, and annotated the first complete chloroplast genome of M. coriacea. The newly assembled chloroplast was analyzed with other available chloroplasts of Sapotaceae. Our results found a general conserved structure. The complete chloroplast genome has 159,689 bp, including 133 genes distributed in four regions: a large single-copy region of 88,887 bp, a small single-copy region of 18,618 bp, and two inverted repeats of 26,092 bp each. Our maximum likelihood phylogenetic tree was generated with 80 protein-coding genes and recovered a monophyletic Sapotaceae sister to a clade formed by Ebenaceae + Primulaceae. In our analysis, Mimusops coriacea clustered with the other eight species of Sapotaceae included in the study.Sociedade Brasileira de Genética2022-01-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572022000100302Genetics and Molecular Biology v.45 n.1 2022reponame:Genetics and Molecular Biologyinstname:Sociedade Brasileira de Genética (SBG)instacron:SBG10.1590/1678-4685-gmb-2021-0174info:eu-repo/semantics/openAccessTrad,Rafaela JorgeSilva,Saura Rodrigues daAmaral,Maria do Carmo Estanislau doeng2022-01-21T00:00:00Zoai:scielo:S1415-47572022000100302Revistahttp://www.gmb.org.br/ONGhttps://old.scielo.br/oai/scielo-oai.php||editor@gmb.org.br1678-46851415-4757opendoar:2022-01-21T00:00Genetics and Molecular Biology - Sociedade Brasileira de Genética (SBG)false
dc.title.none.fl_str_mv The first complete plastome of Mimusops coriacea (A. DC.) Miq. (Sapotaceae)
title The first complete plastome of Mimusops coriacea (A. DC.) Miq. (Sapotaceae)
spellingShingle The first complete plastome of Mimusops coriacea (A. DC.) Miq. (Sapotaceae)
Trad,Rafaela Jorge
Ericales
complete chloroplast genome
Sapotoideae
title_short The first complete plastome of Mimusops coriacea (A. DC.) Miq. (Sapotaceae)
title_full The first complete plastome of Mimusops coriacea (A. DC.) Miq. (Sapotaceae)
title_fullStr The first complete plastome of Mimusops coriacea (A. DC.) Miq. (Sapotaceae)
title_full_unstemmed The first complete plastome of Mimusops coriacea (A. DC.) Miq. (Sapotaceae)
title_sort The first complete plastome of Mimusops coriacea (A. DC.) Miq. (Sapotaceae)
author Trad,Rafaela Jorge
author_facet Trad,Rafaela Jorge
Silva,Saura Rodrigues da
Amaral,Maria do Carmo Estanislau do
author_role author
author2 Silva,Saura Rodrigues da
Amaral,Maria do Carmo Estanislau do
author2_role author
author
dc.contributor.author.fl_str_mv Trad,Rafaela Jorge
Silva,Saura Rodrigues da
Amaral,Maria do Carmo Estanislau do
dc.subject.por.fl_str_mv Ericales
complete chloroplast genome
Sapotoideae
topic Ericales
complete chloroplast genome
Sapotoideae
description Abstract Mimusops coriacea (A. DC.) Miq. (Sapotoideae, Sapotaceae, Ericales) is native to Madagascar and the Comoro Islands. This species is cultivated in many countries around the world and grows on sand in coastal vegetation. Here we sequenced, assembled, and annotated the first complete chloroplast genome of M. coriacea. The newly assembled chloroplast was analyzed with other available chloroplasts of Sapotaceae. Our results found a general conserved structure. The complete chloroplast genome has 159,689 bp, including 133 genes distributed in four regions: a large single-copy region of 88,887 bp, a small single-copy region of 18,618 bp, and two inverted repeats of 26,092 bp each. Our maximum likelihood phylogenetic tree was generated with 80 protein-coding genes and recovered a monophyletic Sapotaceae sister to a clade formed by Ebenaceae + Primulaceae. In our analysis, Mimusops coriacea clustered with the other eight species of Sapotaceae included in the study.
publishDate 2022
dc.date.none.fl_str_mv 2022-01-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572022000100302
url http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572022000100302
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 10.1590/1678-4685-gmb-2021-0174
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv text/html
dc.publisher.none.fl_str_mv Sociedade Brasileira de Genética
publisher.none.fl_str_mv Sociedade Brasileira de Genética
dc.source.none.fl_str_mv Genetics and Molecular Biology v.45 n.1 2022
reponame:Genetics and Molecular Biology
instname:Sociedade Brasileira de Genética (SBG)
instacron:SBG
instname_str Sociedade Brasileira de Genética (SBG)
instacron_str SBG
institution SBG
reponame_str Genetics and Molecular Biology
collection Genetics and Molecular Biology
repository.name.fl_str_mv Genetics and Molecular Biology - Sociedade Brasileira de Genética (SBG)
repository.mail.fl_str_mv ||editor@gmb.org.br
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