Molecular characterization of Brazilian equid herpesvirus type 1 strains based on neuropathogenicity markers

Detalhes bibliográficos
Autor(a) principal: Mori,Enio
Data de Publicação: 2015
Outros Autores: Lara,Maria do Carmo C.S.H., Cunha,Elenice M.S., Villalobos,Eliana M.C., Mori,Claudia M.C., Soares,Rodrigo M., Brandão,Paulo E., Fernandes,Wilson R., Richtzenhain,Leonardo J.
Tipo de documento: Relatório
Idioma: eng
Título da fonte: Brazilian Journal of Microbiology
Texto Completo: http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1517-83822015000200565
Resumo: Partial nucleotide sequences of ORF72 (glycoprotein D, gD), ORF64 (infected cell protein 4, ICP4) and ORF30 (DNA polymerase) genes were compared with corresponding sequences of EHV-1 reference strains to characterize the molecular variability of Brazilian strains. Virus isolation assays were applied to 74 samples including visceral tissue, total blood, cerebrospinal fluid (CSF) and nasal swabs of specimens from a total of 64 animals. Only one CSF sample (Iso07/05 strain) was positive by virus isolation in cell culture. EHV-1 Iso07/05 neurologic strain and two abortion visceral tissues samples (Iso11/06 and Iso33/06) were PCR-positive for ORF33 (glycoprotein B, gB) gene of EHV-1. A sequence analysis of the ORF72, ORF64 and ORF30 genes from three EHV-1 archival strains (A3/97, A4/72, A9/92) and three clinical samples (Iso07/05, Iso11/06 and Iso33/06) suggested that among Brazilian EHV-1 strains, the amplified region of the gD gene sequence is highly conserved. Additionally, the analysis of ICP4 gene showed high nucleotide and amino acid identities when compared with genotype P strains, suggesting that the EHV-1 Brazilian strains belonged to the same group. All the EHV-1 Brazilian strains were classified as non-neuropathogenic variants (N752) based on the ORF30 analysis. These findings indicate a high conservation of the gD-, ICP4- and ORF30-encoding sequences. Different pathotypes of the EHV-1 strain might share identical genes with no specific markers, and tissue tropism is not completely dependent on the gD envelope, immediate-early ICP4 and DNA polymerase proteins.
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spelling Molecular characterization of Brazilian equid herpesvirus type 1 strains based on neuropathogenicity markersequid herpesvirus type 1equid Brazilian herpesvirusICP4 gene (ORF64)glycoprotein D gene (ORF72)DNA polymerase gene (ORF30)Partial nucleotide sequences of ORF72 (glycoprotein D, gD), ORF64 (infected cell protein 4, ICP4) and ORF30 (DNA polymerase) genes were compared with corresponding sequences of EHV-1 reference strains to characterize the molecular variability of Brazilian strains. Virus isolation assays were applied to 74 samples including visceral tissue, total blood, cerebrospinal fluid (CSF) and nasal swabs of specimens from a total of 64 animals. Only one CSF sample (Iso07/05 strain) was positive by virus isolation in cell culture. EHV-1 Iso07/05 neurologic strain and two abortion visceral tissues samples (Iso11/06 and Iso33/06) were PCR-positive for ORF33 (glycoprotein B, gB) gene of EHV-1. A sequence analysis of the ORF72, ORF64 and ORF30 genes from three EHV-1 archival strains (A3/97, A4/72, A9/92) and three clinical samples (Iso07/05, Iso11/06 and Iso33/06) suggested that among Brazilian EHV-1 strains, the amplified region of the gD gene sequence is highly conserved. Additionally, the analysis of ICP4 gene showed high nucleotide and amino acid identities when compared with genotype P strains, suggesting that the EHV-1 Brazilian strains belonged to the same group. All the EHV-1 Brazilian strains were classified as non-neuropathogenic variants (N752) based on the ORF30 analysis. These findings indicate a high conservation of the gD-, ICP4- and ORF30-encoding sequences. Different pathotypes of the EHV-1 strain might share identical genes with no specific markers, and tissue tropism is not completely dependent on the gD envelope, immediate-early ICP4 and DNA polymerase proteins.Sociedade Brasileira de Microbiologia2015-06-01info:eu-repo/semantics/reportinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S1517-83822015000200565Brazilian Journal of Microbiology v.46 n.2 2015reponame:Brazilian Journal of Microbiologyinstname:Sociedade Brasileira de Microbiologia (SBM)instacron:SBM10.1590/S1517-838246220140096info:eu-repo/semantics/openAccessMori,EnioLara,Maria do Carmo C.S.H.Cunha,Elenice M.S.Villalobos,Eliana M.C.Mori,Claudia M.C.Soares,Rodrigo M.Brandão,Paulo E.Fernandes,Wilson R.Richtzenhain,Leonardo J.eng2015-11-27T00:00:00Zoai:scielo:S1517-83822015000200565Revistahttps://www.scielo.br/j/bjm/ONGhttps://old.scielo.br/oai/scielo-oai.phpbjm@sbmicrobiologia.org.br||mbmartin@usp.br1678-44051517-8382opendoar:2015-11-27T00:00Brazilian Journal of Microbiology - Sociedade Brasileira de Microbiologia (SBM)false
dc.title.none.fl_str_mv Molecular characterization of Brazilian equid herpesvirus type 1 strains based on neuropathogenicity markers
title Molecular characterization of Brazilian equid herpesvirus type 1 strains based on neuropathogenicity markers
spellingShingle Molecular characterization of Brazilian equid herpesvirus type 1 strains based on neuropathogenicity markers
Mori,Enio
equid herpesvirus type 1
equid Brazilian herpesvirus
ICP4 gene (ORF64)
glycoprotein D gene (ORF72)
DNA polymerase gene (ORF30)
title_short Molecular characterization of Brazilian equid herpesvirus type 1 strains based on neuropathogenicity markers
title_full Molecular characterization of Brazilian equid herpesvirus type 1 strains based on neuropathogenicity markers
title_fullStr Molecular characterization of Brazilian equid herpesvirus type 1 strains based on neuropathogenicity markers
title_full_unstemmed Molecular characterization of Brazilian equid herpesvirus type 1 strains based on neuropathogenicity markers
title_sort Molecular characterization of Brazilian equid herpesvirus type 1 strains based on neuropathogenicity markers
author Mori,Enio
author_facet Mori,Enio
Lara,Maria do Carmo C.S.H.
Cunha,Elenice M.S.
Villalobos,Eliana M.C.
Mori,Claudia M.C.
Soares,Rodrigo M.
Brandão,Paulo E.
Fernandes,Wilson R.
Richtzenhain,Leonardo J.
author_role author
author2 Lara,Maria do Carmo C.S.H.
Cunha,Elenice M.S.
Villalobos,Eliana M.C.
Mori,Claudia M.C.
Soares,Rodrigo M.
Brandão,Paulo E.
Fernandes,Wilson R.
Richtzenhain,Leonardo J.
author2_role author
author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Mori,Enio
Lara,Maria do Carmo C.S.H.
Cunha,Elenice M.S.
Villalobos,Eliana M.C.
Mori,Claudia M.C.
Soares,Rodrigo M.
Brandão,Paulo E.
Fernandes,Wilson R.
Richtzenhain,Leonardo J.
dc.subject.por.fl_str_mv equid herpesvirus type 1
equid Brazilian herpesvirus
ICP4 gene (ORF64)
glycoprotein D gene (ORF72)
DNA polymerase gene (ORF30)
topic equid herpesvirus type 1
equid Brazilian herpesvirus
ICP4 gene (ORF64)
glycoprotein D gene (ORF72)
DNA polymerase gene (ORF30)
description Partial nucleotide sequences of ORF72 (glycoprotein D, gD), ORF64 (infected cell protein 4, ICP4) and ORF30 (DNA polymerase) genes were compared with corresponding sequences of EHV-1 reference strains to characterize the molecular variability of Brazilian strains. Virus isolation assays were applied to 74 samples including visceral tissue, total blood, cerebrospinal fluid (CSF) and nasal swabs of specimens from a total of 64 animals. Only one CSF sample (Iso07/05 strain) was positive by virus isolation in cell culture. EHV-1 Iso07/05 neurologic strain and two abortion visceral tissues samples (Iso11/06 and Iso33/06) were PCR-positive for ORF33 (glycoprotein B, gB) gene of EHV-1. A sequence analysis of the ORF72, ORF64 and ORF30 genes from three EHV-1 archival strains (A3/97, A4/72, A9/92) and three clinical samples (Iso07/05, Iso11/06 and Iso33/06) suggested that among Brazilian EHV-1 strains, the amplified region of the gD gene sequence is highly conserved. Additionally, the analysis of ICP4 gene showed high nucleotide and amino acid identities when compared with genotype P strains, suggesting that the EHV-1 Brazilian strains belonged to the same group. All the EHV-1 Brazilian strains were classified as non-neuropathogenic variants (N752) based on the ORF30 analysis. These findings indicate a high conservation of the gD-, ICP4- and ORF30-encoding sequences. Different pathotypes of the EHV-1 strain might share identical genes with no specific markers, and tissue tropism is not completely dependent on the gD envelope, immediate-early ICP4 and DNA polymerase proteins.
publishDate 2015
dc.date.none.fl_str_mv 2015-06-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/report
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
format report
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1517-83822015000200565
url http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1517-83822015000200565
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 10.1590/S1517-838246220140096
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv text/html
dc.publisher.none.fl_str_mv Sociedade Brasileira de Microbiologia
publisher.none.fl_str_mv Sociedade Brasileira de Microbiologia
dc.source.none.fl_str_mv Brazilian Journal of Microbiology v.46 n.2 2015
reponame:Brazilian Journal of Microbiology
instname:Sociedade Brasileira de Microbiologia (SBM)
instacron:SBM
instname_str Sociedade Brasileira de Microbiologia (SBM)
instacron_str SBM
institution SBM
reponame_str Brazilian Journal of Microbiology
collection Brazilian Journal of Microbiology
repository.name.fl_str_mv Brazilian Journal of Microbiology - Sociedade Brasileira de Microbiologia (SBM)
repository.mail.fl_str_mv bjm@sbmicrobiologia.org.br||mbmartin@usp.br
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