The violacein biosynthesis monitored by multi-wavelength fluorescence spectroscopy and by the PARAFAC method

Detalhes bibliográficos
Autor(a) principal: Dantas,Clecio
Data de Publicação: 2012
Outros Autores: Volpe,Pedro L. O., Durán,Nelson, Ferreira,Márcia M. C.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Journal of the Brazilian Chemical Society (Online)
Texto Completo: http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0103-50532012001100014
Resumo: Obtaining information about a biosynthetic pathway is a complex and laborious procedure. In this sense, this work presents a new approach for the initial analysis of the biosynthesis of fluorescent natural products using as example the violacein biosynthesis. For this, a culture of Chromobacterium violaceum was grown in a bioreactor from which aliquots were collected every 2 h for subsequent analysis by multi-wavelength fluorescence spectroscopy. The excitation-emission matrices demonstrated the dynamic behavior of the fluorophores signal that are consumed and produced by the bacterium. These signals were resolved by PARAFAC (parallel factor analysis) method totalizing six pure components. Tryptophan and violacein were identified by comparison to spectra available in the literature. The identification of other fluorophores was critical step due to the lack of a database of fluorescent natural products to compare spectra. Finally, this methodology has great potential to achieve a deeper insight into the biosynthesis of natural products.
id SBQ-2_2f6ec4aa55ace3e34d3bbc23ca02b22d
oai_identifier_str oai:scielo:S0103-50532012001100014
network_acronym_str SBQ-2
network_name_str Journal of the Brazilian Chemical Society (Online)
repository_id_str
spelling The violacein biosynthesis monitored by multi-wavelength fluorescence spectroscopy and by the PARAFAC methodbiotransformationviolaceinfluorescence spectroscopycurve resolutionObtaining information about a biosynthetic pathway is a complex and laborious procedure. In this sense, this work presents a new approach for the initial analysis of the biosynthesis of fluorescent natural products using as example the violacein biosynthesis. For this, a culture of Chromobacterium violaceum was grown in a bioreactor from which aliquots were collected every 2 h for subsequent analysis by multi-wavelength fluorescence spectroscopy. The excitation-emission matrices demonstrated the dynamic behavior of the fluorophores signal that are consumed and produced by the bacterium. These signals were resolved by PARAFAC (parallel factor analysis) method totalizing six pure components. Tryptophan and violacein were identified by comparison to spectra available in the literature. The identification of other fluorophores was critical step due to the lack of a database of fluorescent natural products to compare spectra. Finally, this methodology has great potential to achieve a deeper insight into the biosynthesis of natural products.Sociedade Brasileira de Química2012-11-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S0103-50532012001100014Journal of the Brazilian Chemical Society v.23 n.11 2012reponame:Journal of the Brazilian Chemical Society (Online)instname:Sociedade Brasileira de Química (SBQ)instacron:SBQ10.1590/S0103-50532012005000083info:eu-repo/semantics/openAccessDantas,ClecioVolpe,Pedro L. O.Durán,NelsonFerreira,Márcia M. C.eng2013-01-03T00:00:00Zoai:scielo:S0103-50532012001100014Revistahttp://jbcs.sbq.org.brONGhttps://old.scielo.br/oai/scielo-oai.php||office@jbcs.sbq.org.br1678-47900103-5053opendoar:2013-01-03T00:00Journal of the Brazilian Chemical Society (Online) - Sociedade Brasileira de Química (SBQ)false
dc.title.none.fl_str_mv The violacein biosynthesis monitored by multi-wavelength fluorescence spectroscopy and by the PARAFAC method
title The violacein biosynthesis monitored by multi-wavelength fluorescence spectroscopy and by the PARAFAC method
spellingShingle The violacein biosynthesis monitored by multi-wavelength fluorescence spectroscopy and by the PARAFAC method
Dantas,Clecio
biotransformation
violacein
fluorescence spectroscopy
curve resolution
title_short The violacein biosynthesis monitored by multi-wavelength fluorescence spectroscopy and by the PARAFAC method
title_full The violacein biosynthesis monitored by multi-wavelength fluorescence spectroscopy and by the PARAFAC method
title_fullStr The violacein biosynthesis monitored by multi-wavelength fluorescence spectroscopy and by the PARAFAC method
title_full_unstemmed The violacein biosynthesis monitored by multi-wavelength fluorescence spectroscopy and by the PARAFAC method
title_sort The violacein biosynthesis monitored by multi-wavelength fluorescence spectroscopy and by the PARAFAC method
author Dantas,Clecio
author_facet Dantas,Clecio
Volpe,Pedro L. O.
Durán,Nelson
Ferreira,Márcia M. C.
author_role author
author2 Volpe,Pedro L. O.
Durán,Nelson
Ferreira,Márcia M. C.
author2_role author
author
author
dc.contributor.author.fl_str_mv Dantas,Clecio
Volpe,Pedro L. O.
Durán,Nelson
Ferreira,Márcia M. C.
dc.subject.por.fl_str_mv biotransformation
violacein
fluorescence spectroscopy
curve resolution
topic biotransformation
violacein
fluorescence spectroscopy
curve resolution
description Obtaining information about a biosynthetic pathway is a complex and laborious procedure. In this sense, this work presents a new approach for the initial analysis of the biosynthesis of fluorescent natural products using as example the violacein biosynthesis. For this, a culture of Chromobacterium violaceum was grown in a bioreactor from which aliquots were collected every 2 h for subsequent analysis by multi-wavelength fluorescence spectroscopy. The excitation-emission matrices demonstrated the dynamic behavior of the fluorophores signal that are consumed and produced by the bacterium. These signals were resolved by PARAFAC (parallel factor analysis) method totalizing six pure components. Tryptophan and violacein were identified by comparison to spectra available in the literature. The identification of other fluorophores was critical step due to the lack of a database of fluorescent natural products to compare spectra. Finally, this methodology has great potential to achieve a deeper insight into the biosynthesis of natural products.
publishDate 2012
dc.date.none.fl_str_mv 2012-11-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0103-50532012001100014
url http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0103-50532012001100014
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 10.1590/S0103-50532012005000083
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv text/html
dc.publisher.none.fl_str_mv Sociedade Brasileira de Química
publisher.none.fl_str_mv Sociedade Brasileira de Química
dc.source.none.fl_str_mv Journal of the Brazilian Chemical Society v.23 n.11 2012
reponame:Journal of the Brazilian Chemical Society (Online)
instname:Sociedade Brasileira de Química (SBQ)
instacron:SBQ
instname_str Sociedade Brasileira de Química (SBQ)
instacron_str SBQ
institution SBQ
reponame_str Journal of the Brazilian Chemical Society (Online)
collection Journal of the Brazilian Chemical Society (Online)
repository.name.fl_str_mv Journal of the Brazilian Chemical Society (Online) - Sociedade Brasileira de Química (SBQ)
repository.mail.fl_str_mv ||office@jbcs.sbq.org.br
_version_ 1750318174422695936