Non-destructive NIR spectrometric cultivar discrimination of castor seeds resulting from breeding programs

Detalhes bibliográficos
Autor(a) principal: Santos,Maria B. H.
Data de Publicação: 2014
Outros Autores: Gomes,Adriano A., Vilar,Welma T. S., Almeida,Pollyne B. A., Milani,Máira, Nóbrega,Márcia B. M., Medeiros,Everaldo P., Galvão,Roberto K. H., Araújo,Mário C. U.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Journal of the Brazilian Chemical Society (Online)
Texto Completo: http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0103-50532014000500021
Resumo: This article proposes a near-infrared (NIR) diffuse reflectance spectrometric method for non-destructive discrimination of castor seeds from the two cultivars most commonly employed in Brazilian plantations (BRS Nordestina and BRS Paraguaçu). For this purpose, two classification techniques are compared, namely SIMCA (soft independent modelling of class analogies) and PLS-DA (partial least squares discriminant analysis). By applying the SIMCA classifier to a test set comprising 150 seeds, the BRS Nordestina and BRS Paraguaçu class models yielded sensitivity/specificity values of 0.91/0.99 and 0.71/1.00, respectively. Better results were obtained by using PLS-DA, which correctly classified all test samples, i.e., yielded sensitivity and specificity values of 1.00. These findings suggest that the proposed method is a promising approach to identify castor seed genotypes, either in seed lots or for breeding purposes, prior to being planted.
id SBQ-2_52467c711ca83c7a5d22b9984add1d06
oai_identifier_str oai:scielo:S0103-50532014000500021
network_acronym_str SBQ-2
network_name_str Journal of the Brazilian Chemical Society (Online)
repository_id_str
spelling Non-destructive NIR spectrometric cultivar discrimination of castor seeds resulting from breeding programscastor seedsdiscrimination of cultivarsnear-infrared diffuse reflectance spectrometrySIMCAPLS-DAThis article proposes a near-infrared (NIR) diffuse reflectance spectrometric method for non-destructive discrimination of castor seeds from the two cultivars most commonly employed in Brazilian plantations (BRS Nordestina and BRS Paraguaçu). For this purpose, two classification techniques are compared, namely SIMCA (soft independent modelling of class analogies) and PLS-DA (partial least squares discriminant analysis). By applying the SIMCA classifier to a test set comprising 150 seeds, the BRS Nordestina and BRS Paraguaçu class models yielded sensitivity/specificity values of 0.91/0.99 and 0.71/1.00, respectively. Better results were obtained by using PLS-DA, which correctly classified all test samples, i.e., yielded sensitivity and specificity values of 1.00. These findings suggest that the proposed method is a promising approach to identify castor seed genotypes, either in seed lots or for breeding purposes, prior to being planted.Sociedade Brasileira de Química2014-05-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S0103-50532014000500021Journal of the Brazilian Chemical Society v.25 n.5 2014reponame:Journal of the Brazilian Chemical Society (Online)instname:Sociedade Brasileira de Química (SBQ)instacron:SBQ10.5935/0103-5053.20140068info:eu-repo/semantics/openAccessSantos,Maria B. H.Gomes,Adriano A.Vilar,Welma T. S.Almeida,Pollyne B. A.Milani,MáiraNóbrega,Márcia B. M.Medeiros,Everaldo P.Galvão,Roberto K. H.Araújo,Mário C. U.eng2014-05-30T00:00:00Zoai:scielo:S0103-50532014000500021Revistahttp://jbcs.sbq.org.brONGhttps://old.scielo.br/oai/scielo-oai.php||office@jbcs.sbq.org.br1678-47900103-5053opendoar:2014-05-30T00:00Journal of the Brazilian Chemical Society (Online) - Sociedade Brasileira de Química (SBQ)false
dc.title.none.fl_str_mv Non-destructive NIR spectrometric cultivar discrimination of castor seeds resulting from breeding programs
title Non-destructive NIR spectrometric cultivar discrimination of castor seeds resulting from breeding programs
spellingShingle Non-destructive NIR spectrometric cultivar discrimination of castor seeds resulting from breeding programs
Santos,Maria B. H.
castor seeds
discrimination of cultivars
near-infrared diffuse reflectance spectrometry
SIMCA
PLS-DA
title_short Non-destructive NIR spectrometric cultivar discrimination of castor seeds resulting from breeding programs
title_full Non-destructive NIR spectrometric cultivar discrimination of castor seeds resulting from breeding programs
title_fullStr Non-destructive NIR spectrometric cultivar discrimination of castor seeds resulting from breeding programs
title_full_unstemmed Non-destructive NIR spectrometric cultivar discrimination of castor seeds resulting from breeding programs
title_sort Non-destructive NIR spectrometric cultivar discrimination of castor seeds resulting from breeding programs
author Santos,Maria B. H.
author_facet Santos,Maria B. H.
Gomes,Adriano A.
Vilar,Welma T. S.
Almeida,Pollyne B. A.
Milani,Máira
Nóbrega,Márcia B. M.
Medeiros,Everaldo P.
Galvão,Roberto K. H.
Araújo,Mário C. U.
author_role author
author2 Gomes,Adriano A.
Vilar,Welma T. S.
Almeida,Pollyne B. A.
Milani,Máira
Nóbrega,Márcia B. M.
Medeiros,Everaldo P.
Galvão,Roberto K. H.
Araújo,Mário C. U.
author2_role author
author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Santos,Maria B. H.
Gomes,Adriano A.
Vilar,Welma T. S.
Almeida,Pollyne B. A.
Milani,Máira
Nóbrega,Márcia B. M.
Medeiros,Everaldo P.
Galvão,Roberto K. H.
Araújo,Mário C. U.
dc.subject.por.fl_str_mv castor seeds
discrimination of cultivars
near-infrared diffuse reflectance spectrometry
SIMCA
PLS-DA
topic castor seeds
discrimination of cultivars
near-infrared diffuse reflectance spectrometry
SIMCA
PLS-DA
description This article proposes a near-infrared (NIR) diffuse reflectance spectrometric method for non-destructive discrimination of castor seeds from the two cultivars most commonly employed in Brazilian plantations (BRS Nordestina and BRS Paraguaçu). For this purpose, two classification techniques are compared, namely SIMCA (soft independent modelling of class analogies) and PLS-DA (partial least squares discriminant analysis). By applying the SIMCA classifier to a test set comprising 150 seeds, the BRS Nordestina and BRS Paraguaçu class models yielded sensitivity/specificity values of 0.91/0.99 and 0.71/1.00, respectively. Better results were obtained by using PLS-DA, which correctly classified all test samples, i.e., yielded sensitivity and specificity values of 1.00. These findings suggest that the proposed method is a promising approach to identify castor seed genotypes, either in seed lots or for breeding purposes, prior to being planted.
publishDate 2014
dc.date.none.fl_str_mv 2014-05-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0103-50532014000500021
url http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0103-50532014000500021
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 10.5935/0103-5053.20140068
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv text/html
dc.publisher.none.fl_str_mv Sociedade Brasileira de Química
publisher.none.fl_str_mv Sociedade Brasileira de Química
dc.source.none.fl_str_mv Journal of the Brazilian Chemical Society v.25 n.5 2014
reponame:Journal of the Brazilian Chemical Society (Online)
instname:Sociedade Brasileira de Química (SBQ)
instacron:SBQ
instname_str Sociedade Brasileira de Química (SBQ)
instacron_str SBQ
institution SBQ
reponame_str Journal of the Brazilian Chemical Society (Online)
collection Journal of the Brazilian Chemical Society (Online)
repository.name.fl_str_mv Journal of the Brazilian Chemical Society (Online) - Sociedade Brasileira de Química (SBQ)
repository.mail.fl_str_mv ||office@jbcs.sbq.org.br
_version_ 1750318176100417536