Molecular epidemiology of Saint Louis encephalitis virus in the Brazilian Amazon: genetic divergence and dispersal

Detalhes bibliográficos
Autor(a) principal: Rodrigues, Sueli G.
Data de Publicação: 2010
Outros Autores: Nunes, Márcio Roberto Teixeira, Casseb, Samir M. M., Prazeres, Assis S. C., Rodrigues, Daniela S. G., Silva, Mayra O., Cruz, Ana C. R., Tavares-Neto, José, Vasconcelos, Pedro F. C.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UFBA
Texto Completo: http://www.repositorio.ufba.br/ri/handle/ri/12448
Resumo: Texto completo: acesso restrito. p.2420-2427
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spelling Rodrigues, Sueli G.Nunes, Márcio Roberto TeixeiraCasseb, Samir M. M.Prazeres, Assis S. C.Rodrigues, Daniela S. G.Silva, Mayra O.Cruz, Ana C. R.Tavares-Neto, JoséVasconcelos, Pedro F. C.Rodrigues, Sueli G.Nunes, Márcio Roberto TeixeiraCasseb, Samir M. M.Prazeres, Assis S. C.Rodrigues, Daniela S. G.Silva, Mayra O.Cruz, Ana C. R.Tavares-Neto, JoséVasconcelos, Pedro F. C.2013-08-05T13:04:18Z20100022-1317http://www.repositorio.ufba.br/ri/handle/ri/12448v. 91, n. 10Texto completo: acesso restrito. p.2420-2427Saint Louis encephalitis virus (SLEV), a member of the genus Flavivirus (family Flaviviridae), is an encephalitogenic arbovirus broadly distributed in the Americas. Phylogenetic analysis based on the full-length E gene sequences obtained for 30 Brazilian SLEV strains was performed using different methods including Bayesian and relaxed molecular clock approaches. A new genetic lineage was suggested, hereafter named genotype VIII, which co-circulates with the previously described genotype V in the Brazilian Amazon region. Genotypes II and III were restricted to São Paulo state (South-east Atlantic rainforest ecosystem). The analysis also suggested the emergence of an SLEV common ancestor between 1875 and 1973 (mean of 107 years ago), giving rise to two major genetic groups: genotype II, more prevalent in the North America, and a second group comprising the other genotypes (I and III–VIII), broadly dispersed throughout the Americas, suggesting that SLEV initially emerged in South America and spread to North America. In conclusion, the current study demonstrates the high genetic variability of SLEV and its geographical dispersion in Brazil and other New World countries.Submitted by Suelen Reis (suziy.ellen@gmail.com) on 2013-07-30T16:01:34Z No. of bitstreams: 1 2420.full.pdf: 509563 bytes, checksum: 7a3488e2bfca5bb34d604293b619acf2 (MD5)Approved for entry into archive by Flávia Ferreira(flaviaccf@yahoo.com.br) on 2013-08-05T13:04:18Z (GMT) No. of bitstreams: 1 2420.full.pdf: 509563 bytes, checksum: 7a3488e2bfca5bb34d604293b619acf2 (MD5)Made available in DSpace on 2013-08-05T13:04:18Z (GMT). No. of bitstreams: 1 2420.full.pdf: 509563 bytes, checksum: 7a3488e2bfca5bb34d604293b619acf2 (MD5) Previous issue date: 2010http://dx.doi.org/10.1099/vir.0.019117-0reponame:Repositório Institucional da UFBAinstname:Universidade Federal da Bahia (UFBA)instacron:UFBAMolecular EpidemiologyEncephalitis VirusSaintLouis encephalitis virus (SLEV)FlavivirusMolecular epidemiology of Saint Louis encephalitis virus in the Brazilian Amazon: genetic divergence and dispersalJournal of General Virologyinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article10000-01-01enginfo:eu-repo/semantics/openAccessORIGINAL2420.full.pdf2420.full.pdfapplication/pdf509563https://repositorio.ufba.br/bitstream/ri/12448/1/2420.full.pdf7a3488e2bfca5bb34d604293b619acf2MD51LICENSElicense.txtlicense.txttext/plain1762https://repositorio.ufba.br/bitstream/ri/12448/2/license.txt1b89a9a0548218172d7c829f87a0eab9MD52TEXT2420.full.pdf.txt2420.full.pdf.txtExtracted texttext/plain33898https://repositorio.ufba.br/bitstream/ri/12448/3/2420.full.pdf.txtace5492d4e43688da6d07de447059de0MD53ri/124482022-07-05 14:03:43.953oai:repositorio.ufba.br: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Repositório InstitucionalPUBhttp://192.188.11.11:8080/oai/requestopendoar:19322022-07-05T17:03:43Repositório Institucional da UFBA - Universidade Federal da Bahia (UFBA)false
dc.title.pt_BR.fl_str_mv Molecular epidemiology of Saint Louis encephalitis virus in the Brazilian Amazon: genetic divergence and dispersal
dc.title.alternative.pt_BR.fl_str_mv Journal of General Virology
title Molecular epidemiology of Saint Louis encephalitis virus in the Brazilian Amazon: genetic divergence and dispersal
spellingShingle Molecular epidemiology of Saint Louis encephalitis virus in the Brazilian Amazon: genetic divergence and dispersal
Rodrigues, Sueli G.
Molecular Epidemiology
Encephalitis Virus
SaintLouis encephalitis virus (SLEV)
Flavivirus
title_short Molecular epidemiology of Saint Louis encephalitis virus in the Brazilian Amazon: genetic divergence and dispersal
title_full Molecular epidemiology of Saint Louis encephalitis virus in the Brazilian Amazon: genetic divergence and dispersal
title_fullStr Molecular epidemiology of Saint Louis encephalitis virus in the Brazilian Amazon: genetic divergence and dispersal
title_full_unstemmed Molecular epidemiology of Saint Louis encephalitis virus in the Brazilian Amazon: genetic divergence and dispersal
title_sort Molecular epidemiology of Saint Louis encephalitis virus in the Brazilian Amazon: genetic divergence and dispersal
author Rodrigues, Sueli G.
author_facet Rodrigues, Sueli G.
Nunes, Márcio Roberto Teixeira
Casseb, Samir M. M.
Prazeres, Assis S. C.
Rodrigues, Daniela S. G.
Silva, Mayra O.
Cruz, Ana C. R.
Tavares-Neto, José
Vasconcelos, Pedro F. C.
author_role author
author2 Nunes, Márcio Roberto Teixeira
Casseb, Samir M. M.
Prazeres, Assis S. C.
Rodrigues, Daniela S. G.
Silva, Mayra O.
Cruz, Ana C. R.
Tavares-Neto, José
Vasconcelos, Pedro F. C.
author2_role author
author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Rodrigues, Sueli G.
Nunes, Márcio Roberto Teixeira
Casseb, Samir M. M.
Prazeres, Assis S. C.
Rodrigues, Daniela S. G.
Silva, Mayra O.
Cruz, Ana C. R.
Tavares-Neto, José
Vasconcelos, Pedro F. C.
Rodrigues, Sueli G.
Nunes, Márcio Roberto Teixeira
Casseb, Samir M. M.
Prazeres, Assis S. C.
Rodrigues, Daniela S. G.
Silva, Mayra O.
Cruz, Ana C. R.
Tavares-Neto, José
Vasconcelos, Pedro F. C.
dc.subject.por.fl_str_mv Molecular Epidemiology
Encephalitis Virus
SaintLouis encephalitis virus (SLEV)
Flavivirus
topic Molecular Epidemiology
Encephalitis Virus
SaintLouis encephalitis virus (SLEV)
Flavivirus
description Texto completo: acesso restrito. p.2420-2427
publishDate 2010
dc.date.issued.fl_str_mv 2010
dc.date.accessioned.fl_str_mv 2013-08-05T13:04:18Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
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dc.identifier.uri.fl_str_mv http://www.repositorio.ufba.br/ri/handle/ri/12448
dc.identifier.issn.none.fl_str_mv 0022-1317
dc.identifier.number.pt_BR.fl_str_mv v. 91, n. 10
identifier_str_mv 0022-1317
v. 91, n. 10
url http://www.repositorio.ufba.br/ri/handle/ri/12448
dc.language.iso.fl_str_mv eng
language eng
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
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dc.source.pt_BR.fl_str_mv http://dx.doi.org/10.1099/vir.0.019117-0
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