Análise dos genes de virulência cagA, vacA e dupA de Helicobacter pylori e associação com doenças gástrica

Detalhes bibliográficos
Autor(a) principal: Silva, Lucas Luiz de Lima
Data de Publicação: 2021
Tipo de documento: Tese
Idioma: por
Título da fonte: Biblioteca Digital de Teses e Dissertações da UFG
Texto Completo: http://repositorio.bc.ufg.br/tede/handle/tede/11569
Resumo: Helicobacter pylori (H. pylori) is a Gram-negative bacterium associated with the development of different gastropathies. The different clinical outcomes of infection by H. pylori are the result of the parasite-host relationship, and the virulence factors produced by the different strains of H. pylori are determinant in the pathogenesis of the infection. Based on the importance of the topic, the aim of this study was to assess the prevalence of H. pylori infection; compare the Polymerase Chain Reaction (PCR) technique with the histopathological examination for the detection of the microorganism; associate the genotypes of cagA, vacA and dupA virulence with the gastropathies presented by the patients and evaluate the origin of the local circulating strains. For this, gastric tissue biopsies from 117 dyspeptic patients were collected and used for DNA extraction. The histopathological examination report of the study patients was also obtained. The screening for H. pylori infection was performed using the 16S rRNA gene (hpx) and the positive H. pylori samples were subjected to the detection and sequencing of the virulence genes vacA, cagA and dupA. The dupA gene sequences obtained from the PCR were used for phylogenetic analysis. The prevalence of H. pylori infection found in this study was 64.1%, when considering only the PCR technique and 72.3% when associated with histopathological examination. A high frequency of positive cagA strains was found (80.0%). The cagA gene was detected in all strains present in patients with severe pathologies, while the isolated vacA gene was not detected in this group. Seriously ill patients had fewer virulence genes in the infecting strain. The presence of the dupA gene in the infecting strain was not associated as a risk factor or a protective factor for gastropathies, however, in women the infection by H. pylori dupA positive, increased the chance of developing gastritis by two. In addition, molecular phylogeny demonstrated that the dupA gene isolated in this study showed homology with genes from H. pylori strains isolated from western countries. The circulating strains of H. pylori in central-western Brazil show high heterogeneity in the frequency of cagA, vacA and dupA virulence genes and the combination of several virulence factors can influence the clinical outcomes of patients.
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spelling Carneiro, Lilian Carlahttp://lattes.cnpq.br/6506744224041777Carneiro, Lilian CarlaSilva, Antonio Márcio Teodoro CordeiroGama, Aline RodriguesMoraes Filho, Aroldo Vieira deSantos, Mônica de Oliveirahttp://lattes.cnpq.br/5468507702490849Silva, Lucas Luiz de Lima2021-08-24T13:44:45Z2021-08-24T13:44:45Z2021-06-07SILVA, L. L. L. Análise dos genes de virulência cagA, vacA e dupA de Helicobacter pylori e associação com doenças gástrica. 2021. 136 f. Tese (Doutorado em Biologia da Relação Parasito-Hospedeiro) - Universidade Federal de Goiás, Goiânia, 2021.http://repositorio.bc.ufg.br/tede/handle/tede/11569Helicobacter pylori (H. pylori) is a Gram-negative bacterium associated with the development of different gastropathies. The different clinical outcomes of infection by H. pylori are the result of the parasite-host relationship, and the virulence factors produced by the different strains of H. pylori are determinant in the pathogenesis of the infection. Based on the importance of the topic, the aim of this study was to assess the prevalence of H. pylori infection; compare the Polymerase Chain Reaction (PCR) technique with the histopathological examination for the detection of the microorganism; associate the genotypes of cagA, vacA and dupA virulence with the gastropathies presented by the patients and evaluate the origin of the local circulating strains. For this, gastric tissue biopsies from 117 dyspeptic patients were collected and used for DNA extraction. The histopathological examination report of the study patients was also obtained. The screening for H. pylori infection was performed using the 16S rRNA gene (hpx) and the positive H. pylori samples were subjected to the detection and sequencing of the virulence genes vacA, cagA and dupA. The dupA gene sequences obtained from the PCR were used for phylogenetic analysis. The prevalence of H. pylori infection found in this study was 64.1%, when considering only the PCR technique and 72.3% when associated with histopathological examination. A high frequency of positive cagA strains was found (80.0%). The cagA gene was detected in all strains present in patients with severe pathologies, while the isolated vacA gene was not detected in this group. Seriously ill patients had fewer virulence genes in the infecting strain. The presence of the dupA gene in the infecting strain was not associated as a risk factor or a protective factor for gastropathies, however, in women the infection by H. pylori dupA positive, increased the chance of developing gastritis by two. In addition, molecular phylogeny demonstrated that the dupA gene isolated in this study showed homology with genes from H. pylori strains isolated from western countries. The circulating strains of H. pylori in central-western Brazil show high heterogeneity in the frequency of cagA, vacA and dupA virulence genes and the combination of several virulence factors can influence the clinical outcomes of patients.Helicobacter pylori (H. pylori) é uma bactéria Gram-negativa associada ao desenvolvimento de diferentes gastropatias. Os diversos desfechos clínicos da infecção por H. pylori são resultado da relação parasito-hospedeiro, sendo os fatores de virulência produzidos pelas diferentes cepas de H. pylori determinantes na patogênese da infecção. Baseado na importância do tema, o objetivo deste estudo foi avaliar a prevalência da infecção por H. pylori; comparar a técnica de Reação em Cadeia da Polimerase (PCR) com o exame histopatológico na detecção do microrganismo; associar os genótipos de virulência cagA, vacA e dupA com as gastropatias apresentadas pelos pacientes e avaliar a origem das cepas circulantes locais. Para isso, biópsias de tecido gástrico de 117 pacientes dispépticos foram coletadas e utilizadas para a extração de DNA. O laudo do exame histopatológico dos pacientes do estudo, também foram obtidos. A triagem da infecção por H. pylori foi realizada usando o gene16S rRNA (hpx) e as amostras H. pylori positivas foram submetidas à detecção e sequenciamento dos genes de virulência vacA, cagA e dupA. As sequências do gene dupA obtidas da PCR foram utilizadas para a análise filogenética. A prevalência da infecção por H. pylori encontrada neste estudo foi de 64,1%, quando considerado apenas a técnica de PCR e 72.3% quando associado ao exame histopatológico. Foi encontrado uma alta frequência de cepas cagA positivas (80,0%). O gene cagA foi detectado em todas as cepas presentes em pacientes com patologias graves, enquanto o gene vacA isolado não foi detectado nesse grupo. Pacientes com doenças graves tinham menos genes de virulência na cepa infectante. A presença do gene dupA na cepa infectante não foi associado como fator de risco ou fator de proteção de gastropatias, entretanto, em mulheres a infecção por H. pylori dupA positiva, aumentou em duas vezes a chance de desenvolvimento de gastrite. Além disso, a filogenia molecular demonstrou que o gene dupA isolado neste estudo, apresentou homologia com genes de cepas de H. pylori isoladas de países ocidentais. As cepas circulantes de H. pylori no centro-oeste brasileiro apresentam alta heterogeneidade de frequência dos genes de virulência cagA, vacA e dupA e a combinação de vários fatores de virulência podem influenciar nos desfechos clínicos dos pacientes.Submitted by Franciele Moreira (francielemoreyra@gmail.com) on 2021-08-16T02:50:58Z No. of bitstreams: 2 Tese - Lucas Luiz de Lima Silva - 2021.pdf: 3896265 bytes, checksum: 886713b9f65c9577b767d4646a24a5be (MD5) license_rdf: 805 bytes, checksum: 4460e5956bc1d1639be9ae6146a50347 (MD5)Rejected by Luciana Ferreira (lucgeral@gmail.com), reason: A citação está errada e terá que perguntar ao aluno se podemos realmente publicar. on 2021-08-16T14:15:39Z (GMT)Submitted by Franciele Moreira (francielemoreyra@gmail.com) on 2021-08-16T14:30:25Z No. of bitstreams: 2 Tese - Lucas Luiz de Lima Silva - 2021.pdf: 3896265 bytes, checksum: 886713b9f65c9577b767d4646a24a5be (MD5) license_rdf: 805 bytes, checksum: 4460e5956bc1d1639be9ae6146a50347 (MD5)Rejected by Luciana Ferreira (lucgeral@gmail.com), reason: Aguardo substituição do arquivo on 2021-08-17T13:30:21Z (GMT)Submitted by Franciele Moreira (francielemoreyra@gmail.com) on 2021-08-23T14:27:10Z No. of bitstreams: 1 license_rdf: 805 bytes, checksum: 4460e5956bc1d1639be9ae6146a50347 (MD5)Approved for entry into archive by Luciana Ferreira (lucgeral@gmail.com) on 2021-08-24T13:44:44Z (GMT) No. of bitstreams: 2 Tese - Lucas Luiz de Lima Silva - 2021.pdf: 3686516 bytes, checksum: b13707acae85e7cdc3f8d891b9019023 (MD5) license_rdf: 805 bytes, checksum: 4460e5956bc1d1639be9ae6146a50347 (MD5)Made available in DSpace on 2021-08-24T13:44:45Z (GMT). No. of bitstreams: 2 Tese - Lucas Luiz de Lima Silva - 2021.pdf: 3686516 bytes, checksum: b13707acae85e7cdc3f8d891b9019023 (MD5) license_rdf: 805 bytes, checksum: 4460e5956bc1d1639be9ae6146a50347 (MD5) Previous issue date: 2021-06-07porUniversidade Federal de GoiásPrograma de Pós-graduação em Biologia da Relação Parasito-Hospedeiro (IPTSP)UFGBrasilInstituto de Patologia Tropical e Saúde Pública - IPTSP (RG)Attribution-NonCommercial-NoDerivatives 4.0 Internationalhttp://creativecommons.org/licenses/by-nc-nd/4.0/info:eu-repo/semantics/openAccessGastropatiasBactériaPatologia molecularFatores de virulênciaGastropathiesBacteriaMolecular pathologyVirulence factorsCIENCIAS BIOLOGICAS::BIOLOGIA GERALAnálise dos genes de virulência cagA, vacA e dupA de Helicobacter pylori e associação com doenças gástricaAnalysis of Helicobacter pylori virulence genes cagA, vacA and dupA and association with gastric diseasesinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/doctoralThesis1650050050028160reponame:Biblioteca Digital de Teses e Dissertações da UFGinstname:Universidade Federal de Goiás (UFG)instacron:UFGLICENSElicense.txtlicense.txttext/plain; charset=utf-81748http://repositorio.bc.ufg.br/tede/bitstreams/a3f6175d-09ae-4a18-8785-a481148126b2/download8a4605be74aa9ea9d79846c1fba20a33MD51CC-LICENSElicense_rdflicense_rdfapplication/rdf+xml; charset=utf-8805http://repositorio.bc.ufg.br/tede/bitstreams/cc170c17-2751-4ba7-b3a3-de6eb76625e2/download4460e5956bc1d1639be9ae6146a50347MD52ORIGINALTese - Lucas Luiz de Lima Silva - 2021.pdfTese - Lucas Luiz de Lima Silva - 2021.pdfapplication/pdf3686516http://repositorio.bc.ufg.br/tede/bitstreams/7f6386e7-ab84-4384-9911-5f448c1acf4d/downloadb13707acae85e7cdc3f8d891b9019023MD53tede/115692021-08-24 10:44:45.599http://creativecommons.org/licenses/by-nc-nd/4.0/Attribution-NonCommercial-NoDerivatives 4.0 Internationalopen.accessoai:repositorio.bc.ufg.br:tede/11569http://repositorio.bc.ufg.br/tedeBiblioteca Digital de Teses e Dissertaçõeshttp://repositorio.bc.ufg.br/PUBhttps://repositorio.bc.ufg.br/tede_oai/requesttesesdissertacoes.bc@ufg.br ||tesesdissertacoes.bc@ufg.bropendoar:32082021-08-24T13:44:45Biblioteca Digital de Teses e Dissertações da UFG - Universidade Federal de Goiás (UFG)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
dc.title.pt_BR.fl_str_mv Análise dos genes de virulência cagA, vacA e dupA de Helicobacter pylori e associação com doenças gástrica
dc.title.alternative.eng.fl_str_mv Analysis of Helicobacter pylori virulence genes cagA, vacA and dupA and association with gastric diseases
title Análise dos genes de virulência cagA, vacA e dupA de Helicobacter pylori e associação com doenças gástrica
spellingShingle Análise dos genes de virulência cagA, vacA e dupA de Helicobacter pylori e associação com doenças gástrica
Silva, Lucas Luiz de Lima
Gastropatias
Bactéria
Patologia molecular
Fatores de virulência
Gastropathies
Bacteria
Molecular pathology
Virulence factors
CIENCIAS BIOLOGICAS::BIOLOGIA GERAL
title_short Análise dos genes de virulência cagA, vacA e dupA de Helicobacter pylori e associação com doenças gástrica
title_full Análise dos genes de virulência cagA, vacA e dupA de Helicobacter pylori e associação com doenças gástrica
title_fullStr Análise dos genes de virulência cagA, vacA e dupA de Helicobacter pylori e associação com doenças gástrica
title_full_unstemmed Análise dos genes de virulência cagA, vacA e dupA de Helicobacter pylori e associação com doenças gástrica
title_sort Análise dos genes de virulência cagA, vacA e dupA de Helicobacter pylori e associação com doenças gástrica
author Silva, Lucas Luiz de Lima
author_facet Silva, Lucas Luiz de Lima
author_role author
dc.contributor.advisor1.fl_str_mv Carneiro, Lilian Carla
dc.contributor.advisor1Lattes.fl_str_mv http://lattes.cnpq.br/6506744224041777
dc.contributor.referee1.fl_str_mv Carneiro, Lilian Carla
dc.contributor.referee2.fl_str_mv Silva, Antonio Márcio Teodoro Cordeiro
dc.contributor.referee3.fl_str_mv Gama, Aline Rodrigues
dc.contributor.referee4.fl_str_mv Moraes Filho, Aroldo Vieira de
dc.contributor.referee5.fl_str_mv Santos, Mônica de Oliveira
dc.contributor.authorLattes.fl_str_mv http://lattes.cnpq.br/5468507702490849
dc.contributor.author.fl_str_mv Silva, Lucas Luiz de Lima
contributor_str_mv Carneiro, Lilian Carla
Carneiro, Lilian Carla
Silva, Antonio Márcio Teodoro Cordeiro
Gama, Aline Rodrigues
Moraes Filho, Aroldo Vieira de
Santos, Mônica de Oliveira
dc.subject.por.fl_str_mv Gastropatias
Bactéria
Patologia molecular
Fatores de virulência
topic Gastropatias
Bactéria
Patologia molecular
Fatores de virulência
Gastropathies
Bacteria
Molecular pathology
Virulence factors
CIENCIAS BIOLOGICAS::BIOLOGIA GERAL
dc.subject.eng.fl_str_mv Gastropathies
Bacteria
Molecular pathology
Virulence factors
dc.subject.cnpq.fl_str_mv CIENCIAS BIOLOGICAS::BIOLOGIA GERAL
description Helicobacter pylori (H. pylori) is a Gram-negative bacterium associated with the development of different gastropathies. The different clinical outcomes of infection by H. pylori are the result of the parasite-host relationship, and the virulence factors produced by the different strains of H. pylori are determinant in the pathogenesis of the infection. Based on the importance of the topic, the aim of this study was to assess the prevalence of H. pylori infection; compare the Polymerase Chain Reaction (PCR) technique with the histopathological examination for the detection of the microorganism; associate the genotypes of cagA, vacA and dupA virulence with the gastropathies presented by the patients and evaluate the origin of the local circulating strains. For this, gastric tissue biopsies from 117 dyspeptic patients were collected and used for DNA extraction. The histopathological examination report of the study patients was also obtained. The screening for H. pylori infection was performed using the 16S rRNA gene (hpx) and the positive H. pylori samples were subjected to the detection and sequencing of the virulence genes vacA, cagA and dupA. The dupA gene sequences obtained from the PCR were used for phylogenetic analysis. The prevalence of H. pylori infection found in this study was 64.1%, when considering only the PCR technique and 72.3% when associated with histopathological examination. A high frequency of positive cagA strains was found (80.0%). The cagA gene was detected in all strains present in patients with severe pathologies, while the isolated vacA gene was not detected in this group. Seriously ill patients had fewer virulence genes in the infecting strain. The presence of the dupA gene in the infecting strain was not associated as a risk factor or a protective factor for gastropathies, however, in women the infection by H. pylori dupA positive, increased the chance of developing gastritis by two. In addition, molecular phylogeny demonstrated that the dupA gene isolated in this study showed homology with genes from H. pylori strains isolated from western countries. The circulating strains of H. pylori in central-western Brazil show high heterogeneity in the frequency of cagA, vacA and dupA virulence genes and the combination of several virulence factors can influence the clinical outcomes of patients.
publishDate 2021
dc.date.accessioned.fl_str_mv 2021-08-24T13:44:45Z
dc.date.available.fl_str_mv 2021-08-24T13:44:45Z
dc.date.issued.fl_str_mv 2021-06-07
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/doctoralThesis
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dc.identifier.citation.fl_str_mv SILVA, L. L. L. Análise dos genes de virulência cagA, vacA e dupA de Helicobacter pylori e associação com doenças gástrica. 2021. 136 f. Tese (Doutorado em Biologia da Relação Parasito-Hospedeiro) - Universidade Federal de Goiás, Goiânia, 2021.
dc.identifier.uri.fl_str_mv http://repositorio.bc.ufg.br/tede/handle/tede/11569
identifier_str_mv SILVA, L. L. L. Análise dos genes de virulência cagA, vacA e dupA de Helicobacter pylori e associação com doenças gástrica. 2021. 136 f. Tese (Doutorado em Biologia da Relação Parasito-Hospedeiro) - Universidade Federal de Goiás, Goiânia, 2021.
url http://repositorio.bc.ufg.br/tede/handle/tede/11569
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language por
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http://creativecommons.org/licenses/by-nc-nd/4.0/
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dc.publisher.none.fl_str_mv Universidade Federal de Goiás
dc.publisher.program.fl_str_mv Programa de Pós-graduação em Biologia da Relação Parasito-Hospedeiro (IPTSP)
dc.publisher.initials.fl_str_mv UFG
dc.publisher.country.fl_str_mv Brasil
dc.publisher.department.fl_str_mv Instituto de Patologia Tropical e Saúde Pública - IPTSP (RG)
publisher.none.fl_str_mv Universidade Federal de Goiás
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