Genetic characterization of remaining populations of paratecoma peroba, an endangered and endemic species of the Atlantic Forest

Detalhes bibliográficos
Autor(a) principal: França, Tábatta Caroline Cerri
Data de Publicação: 2022
Outros Autores: Tavares, Leticia Rigo, Silva Júnior, Adelson Lemes da, Miranda, Fábio Demolinari de, Vargas, Lucas Batista, Abreu, Karla Maria Pedra de, Caldeira, Marcos Vinicius Winckler
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UFLA
Texto Completo: http://repositorio.ufla.br/jspui/handle/1/54382
Resumo: Background: The objective of this study was the genetic characterization of remaining populations of the species Paratecoma peroba occurring in fragments of the Atlantic Forest, by estimating parameters of diversity and genetic structure. The study was carried out in two forest fragments, the Atlantic Forest Environmental Education Pole (area 1) and the Pacotuba National Forest (area 2), where 93 adult trees were identified. Results: Ten Inter Simple Sequence Repeats (ISSR) primers were used in genotyping, obtaining 112 amplified bands with 87.5% polymorphism. The genetic diversity estimated for the populations from the Nei (H*) and Shannon (I*) indices was higher for area 1. For the joint data, moderate genetic diversity was observed, referring to the average values of 0.26 and 0.40, obtained for the H* and I* indices, respectively. Molecular variance analysis resulted in moderate differentiation between populations (ΦST = 0.143), while gene flow analysis (N m = 6.69) revealed the occurrence of similar alleles between them. However, the predominance of a single genetic group in area 2, revealed from Bayesian approach, indicates that its genetic structure, possibly generated by the current scenario of fragmentation of the Atlantic Forest and the distancing of populations, affecting the contemporary gene flow. Conclusion: Despite the moderate genetic diversity of the species for the area 2 population, actions toward inclusion of seedlings obtained from seeds from neighboring fragments, including area 1, and the increase in the connectivity of forest fragments through ecological corridors, could assist in augmenting its genetic variation.
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spelling Genetic characterization of remaining populations of paratecoma peroba, an endangered and endemic species of the Atlantic ForestForest conservationGenetic diversityInter Simple Sequence Repeats (ISSR)Peroba do campoPopulation structureConservação da florestaDiversidade genéticaEstrutura populacionalBackground: The objective of this study was the genetic characterization of remaining populations of the species Paratecoma peroba occurring in fragments of the Atlantic Forest, by estimating parameters of diversity and genetic structure. The study was carried out in two forest fragments, the Atlantic Forest Environmental Education Pole (area 1) and the Pacotuba National Forest (area 2), where 93 adult trees were identified. Results: Ten Inter Simple Sequence Repeats (ISSR) primers were used in genotyping, obtaining 112 amplified bands with 87.5% polymorphism. The genetic diversity estimated for the populations from the Nei (H*) and Shannon (I*) indices was higher for area 1. For the joint data, moderate genetic diversity was observed, referring to the average values of 0.26 and 0.40, obtained for the H* and I* indices, respectively. Molecular variance analysis resulted in moderate differentiation between populations (ΦST = 0.143), while gene flow analysis (N m = 6.69) revealed the occurrence of similar alleles between them. However, the predominance of a single genetic group in area 2, revealed from Bayesian approach, indicates that its genetic structure, possibly generated by the current scenario of fragmentation of the Atlantic Forest and the distancing of populations, affecting the contemporary gene flow. Conclusion: Despite the moderate genetic diversity of the species for the area 2 population, actions toward inclusion of seedlings obtained from seeds from neighboring fragments, including area 1, and the increase in the connectivity of forest fragments through ecological corridors, could assist in augmenting its genetic variation.Universidade Federal de Lavras2022-08-29T19:52:03Z2022-08-29T19:52:03Z2022-08info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfFRANÇA, T. C. C. et al. Genetic characterization of remaining populations of Paratecoma peroba, an endangered and endemic species of the atlantic forest. CERNE, Lavras, v. 28, n. 1, e-103055, 2022. DOI: 10.1590/01047760202228013055.http://repositorio.ufla.br/jspui/handle/1/54382CERNEreponame:Repositório Institucional da UFLAinstname:Universidade Federal de Lavras (UFLA)instacron:UFLAhttp://creativecommons.org/licenses/by/4.0/info:eu-repo/semantics/openAccessFrança, Tábatta Caroline CerriTavares, Leticia RigoSilva Júnior, Adelson Lemes daMiranda, Fábio Demolinari deVargas, Lucas BatistaAbreu, Karla Maria Pedra deCaldeira, Marcos Vinicius Wincklereng2022-08-29T19:52:27Zoai:localhost:1/54382Repositório InstitucionalPUBhttp://repositorio.ufla.br/oai/requestnivaldo@ufla.br || repositorio.biblioteca@ufla.bropendoar:2022-08-29T19:52:27Repositório Institucional da UFLA - Universidade Federal de Lavras (UFLA)false
dc.title.none.fl_str_mv Genetic characterization of remaining populations of paratecoma peroba, an endangered and endemic species of the Atlantic Forest
title Genetic characterization of remaining populations of paratecoma peroba, an endangered and endemic species of the Atlantic Forest
spellingShingle Genetic characterization of remaining populations of paratecoma peroba, an endangered and endemic species of the Atlantic Forest
França, Tábatta Caroline Cerri
Forest conservation
Genetic diversity
Inter Simple Sequence Repeats (ISSR)
Peroba do campo
Population structure
Conservação da floresta
Diversidade genética
Estrutura populacional
title_short Genetic characterization of remaining populations of paratecoma peroba, an endangered and endemic species of the Atlantic Forest
title_full Genetic characterization of remaining populations of paratecoma peroba, an endangered and endemic species of the Atlantic Forest
title_fullStr Genetic characterization of remaining populations of paratecoma peroba, an endangered and endemic species of the Atlantic Forest
title_full_unstemmed Genetic characterization of remaining populations of paratecoma peroba, an endangered and endemic species of the Atlantic Forest
title_sort Genetic characterization of remaining populations of paratecoma peroba, an endangered and endemic species of the Atlantic Forest
author França, Tábatta Caroline Cerri
author_facet França, Tábatta Caroline Cerri
Tavares, Leticia Rigo
Silva Júnior, Adelson Lemes da
Miranda, Fábio Demolinari de
Vargas, Lucas Batista
Abreu, Karla Maria Pedra de
Caldeira, Marcos Vinicius Winckler
author_role author
author2 Tavares, Leticia Rigo
Silva Júnior, Adelson Lemes da
Miranda, Fábio Demolinari de
Vargas, Lucas Batista
Abreu, Karla Maria Pedra de
Caldeira, Marcos Vinicius Winckler
author2_role author
author
author
author
author
author
dc.contributor.author.fl_str_mv França, Tábatta Caroline Cerri
Tavares, Leticia Rigo
Silva Júnior, Adelson Lemes da
Miranda, Fábio Demolinari de
Vargas, Lucas Batista
Abreu, Karla Maria Pedra de
Caldeira, Marcos Vinicius Winckler
dc.subject.por.fl_str_mv Forest conservation
Genetic diversity
Inter Simple Sequence Repeats (ISSR)
Peroba do campo
Population structure
Conservação da floresta
Diversidade genética
Estrutura populacional
topic Forest conservation
Genetic diversity
Inter Simple Sequence Repeats (ISSR)
Peroba do campo
Population structure
Conservação da floresta
Diversidade genética
Estrutura populacional
description Background: The objective of this study was the genetic characterization of remaining populations of the species Paratecoma peroba occurring in fragments of the Atlantic Forest, by estimating parameters of diversity and genetic structure. The study was carried out in two forest fragments, the Atlantic Forest Environmental Education Pole (area 1) and the Pacotuba National Forest (area 2), where 93 adult trees were identified. Results: Ten Inter Simple Sequence Repeats (ISSR) primers were used in genotyping, obtaining 112 amplified bands with 87.5% polymorphism. The genetic diversity estimated for the populations from the Nei (H*) and Shannon (I*) indices was higher for area 1. For the joint data, moderate genetic diversity was observed, referring to the average values of 0.26 and 0.40, obtained for the H* and I* indices, respectively. Molecular variance analysis resulted in moderate differentiation between populations (ΦST = 0.143), while gene flow analysis (N m = 6.69) revealed the occurrence of similar alleles between them. However, the predominance of a single genetic group in area 2, revealed from Bayesian approach, indicates that its genetic structure, possibly generated by the current scenario of fragmentation of the Atlantic Forest and the distancing of populations, affecting the contemporary gene flow. Conclusion: Despite the moderate genetic diversity of the species for the area 2 population, actions toward inclusion of seedlings obtained from seeds from neighboring fragments, including area 1, and the increase in the connectivity of forest fragments through ecological corridors, could assist in augmenting its genetic variation.
publishDate 2022
dc.date.none.fl_str_mv 2022-08-29T19:52:03Z
2022-08-29T19:52:03Z
2022-08
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv FRANÇA, T. C. C. et al. Genetic characterization of remaining populations of Paratecoma peroba, an endangered and endemic species of the atlantic forest. CERNE, Lavras, v. 28, n. 1, e-103055, 2022. DOI: 10.1590/01047760202228013055.
http://repositorio.ufla.br/jspui/handle/1/54382
identifier_str_mv FRANÇA, T. C. C. et al. Genetic characterization of remaining populations of Paratecoma peroba, an endangered and endemic species of the atlantic forest. CERNE, Lavras, v. 28, n. 1, e-103055, 2022. DOI: 10.1590/01047760202228013055.
url http://repositorio.ufla.br/jspui/handle/1/54382
dc.language.iso.fl_str_mv eng
language eng
dc.rights.driver.fl_str_mv http://creativecommons.org/licenses/by/4.0/
info:eu-repo/semantics/openAccess
rights_invalid_str_mv http://creativecommons.org/licenses/by/4.0/
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Universidade Federal de Lavras
publisher.none.fl_str_mv Universidade Federal de Lavras
dc.source.none.fl_str_mv CERNE
reponame:Repositório Institucional da UFLA
instname:Universidade Federal de Lavras (UFLA)
instacron:UFLA
instname_str Universidade Federal de Lavras (UFLA)
instacron_str UFLA
institution UFLA
reponame_str Repositório Institucional da UFLA
collection Repositório Institucional da UFLA
repository.name.fl_str_mv Repositório Institucional da UFLA - Universidade Federal de Lavras (UFLA)
repository.mail.fl_str_mv nivaldo@ufla.br || repositorio.biblioteca@ufla.br
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