High genetic diversity and connectivity in Colossoma macropomum in the Amazon basin revealed by microsatellite markers

Detalhes bibliográficos
Autor(a) principal: GOMES, Paola Fabiana Fazzi
Data de Publicação: 2017
Outros Autores: GUERREIRO, Sávio Lucas de Matos, PALHETA, Glauber David Almeida, MELO, Nuno Filipe Alves Correa de, SANTOS, Sidney Emanuel Batista dos, HAMOY, Igor Guerreiro
Tipo de documento: Artigo
Idioma: por
Título da fonte: Repositório Institucional da UFPA
Texto Completo: http://repositorio.ufpa.br/jspui/handle/2011/8794
Resumo: Colossoma macropomum is the second largest scaled fish of the Amazon. It is economically important for commercial fisheries and for aquaculture, but few studies have examined the diversity and genetic structure of natural populations of this species. The aim of this study was to investigate the levels of genetic variability and connectivity that exist between three natural populations of C. macropomum from the Amazon basin. In total, 247 samples were collected from the municipalities of Tefé, Manaus, and Santarém. The populations were genotyped using a panel of 12 multiplex microsatellite markers. The genetic diversity found in these populations was high and similar to other populations described in the literature. These populations showed a pattern of high gene flow associated with the lack of a genetic structure pattern, indicating that the number of migrants per generation and recent migration rates are high. The values of the FST, RST, and exact test of differentiation were not significant for pairwise comparisons between populations. The Bayesian population clustering analysis indicated a single population. Thus, the data provide evidence for high genetic diversity and high gene flow among C. macropomum populations in the investigated region of the Amazon basin. This information is important for programs aiming at the conservation of natural populations.
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spelling 2017-07-06T12:42:48Z2017-07-06T12:42:48Z2017-03GOMES, Paola Fabiana Fazzi et al. High genetic diversity and connectivity in Colossoma macropomum in the Amazon basin revealed by microsatellite markers. Genetics and Molecular Biology, Ribeirão Preto, v. 40, n. 1, p. 142-146, jan./mar. 2017. Disponível em: <http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572017000100142&lng=pt&nrm=iso>. Acesso em: 06 jul. 2017. Epub 06-Fev-2017. <http://dx.doi.org/10.1590/1678-4685-gmb-2015-0222>.1678-4685http://repositorio.ufpa.br/jspui/handle/2011/8794Colossoma macropomum is the second largest scaled fish of the Amazon. It is economically important for commercial fisheries and for aquaculture, but few studies have examined the diversity and genetic structure of natural populations of this species. The aim of this study was to investigate the levels of genetic variability and connectivity that exist between three natural populations of C. macropomum from the Amazon basin. In total, 247 samples were collected from the municipalities of Tefé, Manaus, and Santarém. The populations were genotyped using a panel of 12 multiplex microsatellite markers. The genetic diversity found in these populations was high and similar to other populations described in the literature. These populations showed a pattern of high gene flow associated with the lack of a genetic structure pattern, indicating that the number of migrants per generation and recent migration rates are high. The values of the FST, RST, and exact test of differentiation were not significant for pairwise comparisons between populations. The Bayesian population clustering analysis indicated a single population. Thus, the data provide evidence for high genetic diversity and high gene flow among C. macropomum populations in the investigated region of the Amazon basin. This information is important for programs aiming at the conservation of natural populations.porUniversidade Federal do ParáUFPABrasilGenetics and Molecular BiologyGenéticaColossoma macropomumGenótipoPopulações naturaisBacia amazônicaHigh genetic diversity and connectivity in Colossoma macropomum in the Amazon basin revealed by microsatellite markersinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article401142146GOMES, Paola Fabiana FazziGUERREIRO, Sávio Lucas de MatosPALHETA, Glauber David AlmeidaMELO, Nuno Filipe Alves Correa deSANTOS, Sidney Emanuel Batista dosHAMOY, Igor Guerreiroinfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da UFPAinstname:Universidade Federal do Pará (UFPA)instacron:UFPAORIGINALArtigo_HighGeneticDiversity.pdfArtigo_HighGeneticDiversity.pdfapplication/pdf1127979http://repositorio.ufpa.br/oai/bitstream/2011/8794/1/Artigo_HighGeneticDiversity.pdfeb069f94b07c93c7e47b5f695dc89349MD51CC-LICENSElicense_urllicense_urltext/plain; charset=utf-849http://repositorio.ufpa.br/oai/bitstream/2011/8794/2/license_url4afdbb8c545fd630ea7db775da747b2fMD52license_textlicense_texttext/html; charset=utf-80http://repositorio.ufpa.br/oai/bitstream/2011/8794/3/license_textd41d8cd98f00b204e9800998ecf8427eMD53license_rdflicense_rdfapplication/rdf+xml; charset=utf-80http://repositorio.ufpa.br/oai/bitstream/2011/8794/4/license_rdfd41d8cd98f00b204e9800998ecf8427eMD54LICENSElicense.txtlicense.txttext/plain; charset=utf-81866http://repositorio.ufpa.br/oai/bitstream/2011/8794/5/license.txt43cd690d6a359e86c1fe3d5b7cba0c9bMD55TEXTArtigo_HighGeneticDiversity.pdf.txtArtigo_HighGeneticDiversity.pdf.txtExtracted texttext/plain24395http://repositorio.ufpa.br/oai/bitstream/2011/8794/6/Artigo_HighGeneticDiversity.pdf.txt78edb4bad804c2b49325d01a22a77559MD562011/87942018-11-14 12:24:44.079oai:repositorio.ufpa.br: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ório InstitucionalPUBhttp://repositorio.ufpa.br/oai/requestriufpabc@ufpa.bropendoar:21232018-11-14T15:24:44Repositório Institucional da UFPA - Universidade Federal do Pará (UFPA)false
dc.title.pt_BR.fl_str_mv High genetic diversity and connectivity in Colossoma macropomum in the Amazon basin revealed by microsatellite markers
title High genetic diversity and connectivity in Colossoma macropomum in the Amazon basin revealed by microsatellite markers
spellingShingle High genetic diversity and connectivity in Colossoma macropomum in the Amazon basin revealed by microsatellite markers
GOMES, Paola Fabiana Fazzi
Genética
Colossoma macropomum
Genótipo
Populações naturais
Bacia amazônica
title_short High genetic diversity and connectivity in Colossoma macropomum in the Amazon basin revealed by microsatellite markers
title_full High genetic diversity and connectivity in Colossoma macropomum in the Amazon basin revealed by microsatellite markers
title_fullStr High genetic diversity and connectivity in Colossoma macropomum in the Amazon basin revealed by microsatellite markers
title_full_unstemmed High genetic diversity and connectivity in Colossoma macropomum in the Amazon basin revealed by microsatellite markers
title_sort High genetic diversity and connectivity in Colossoma macropomum in the Amazon basin revealed by microsatellite markers
author GOMES, Paola Fabiana Fazzi
author_facet GOMES, Paola Fabiana Fazzi
GUERREIRO, Sávio Lucas de Matos
PALHETA, Glauber David Almeida
MELO, Nuno Filipe Alves Correa de
SANTOS, Sidney Emanuel Batista dos
HAMOY, Igor Guerreiro
author_role author
author2 GUERREIRO, Sávio Lucas de Matos
PALHETA, Glauber David Almeida
MELO, Nuno Filipe Alves Correa de
SANTOS, Sidney Emanuel Batista dos
HAMOY, Igor Guerreiro
author2_role author
author
author
author
author
dc.contributor.author.fl_str_mv GOMES, Paola Fabiana Fazzi
GUERREIRO, Sávio Lucas de Matos
PALHETA, Glauber David Almeida
MELO, Nuno Filipe Alves Correa de
SANTOS, Sidney Emanuel Batista dos
HAMOY, Igor Guerreiro
dc.subject.por.fl_str_mv Genética
Colossoma macropomum
Genótipo
Populações naturais
Bacia amazônica
topic Genética
Colossoma macropomum
Genótipo
Populações naturais
Bacia amazônica
description Colossoma macropomum is the second largest scaled fish of the Amazon. It is economically important for commercial fisheries and for aquaculture, but few studies have examined the diversity and genetic structure of natural populations of this species. The aim of this study was to investigate the levels of genetic variability and connectivity that exist between three natural populations of C. macropomum from the Amazon basin. In total, 247 samples were collected from the municipalities of Tefé, Manaus, and Santarém. The populations were genotyped using a panel of 12 multiplex microsatellite markers. The genetic diversity found in these populations was high and similar to other populations described in the literature. These populations showed a pattern of high gene flow associated with the lack of a genetic structure pattern, indicating that the number of migrants per generation and recent migration rates are high. The values of the FST, RST, and exact test of differentiation were not significant for pairwise comparisons between populations. The Bayesian population clustering analysis indicated a single population. Thus, the data provide evidence for high genetic diversity and high gene flow among C. macropomum populations in the investigated region of the Amazon basin. This information is important for programs aiming at the conservation of natural populations.
publishDate 2017
dc.date.accessioned.fl_str_mv 2017-07-06T12:42:48Z
dc.date.available.fl_str_mv 2017-07-06T12:42:48Z
dc.date.issued.fl_str_mv 2017-03
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dc.identifier.citation.fl_str_mv GOMES, Paola Fabiana Fazzi et al. High genetic diversity and connectivity in Colossoma macropomum in the Amazon basin revealed by microsatellite markers. Genetics and Molecular Biology, Ribeirão Preto, v. 40, n. 1, p. 142-146, jan./mar. 2017. Disponível em: <http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572017000100142&lng=pt&nrm=iso>. Acesso em: 06 jul. 2017. Epub 06-Fev-2017. <http://dx.doi.org/10.1590/1678-4685-gmb-2015-0222>.
dc.identifier.uri.fl_str_mv http://repositorio.ufpa.br/jspui/handle/2011/8794
dc.identifier.issn.pt_BR.fl_str_mv 1678-4685
identifier_str_mv GOMES, Paola Fabiana Fazzi et al. High genetic diversity and connectivity in Colossoma macropomum in the Amazon basin revealed by microsatellite markers. Genetics and Molecular Biology, Ribeirão Preto, v. 40, n. 1, p. 142-146, jan./mar. 2017. Disponível em: <http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572017000100142&lng=pt&nrm=iso>. Acesso em: 06 jul. 2017. Epub 06-Fev-2017. <http://dx.doi.org/10.1590/1678-4685-gmb-2015-0222>.
1678-4685
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