Bayesian inferences suggest that Amazon Yunga Natives diverged from Andeans less than 5000 ybp : implications for South American prehistory

Detalhes bibliográficos
Autor(a) principal: Scliar, Marília Oliveira
Data de Publicação: 2014
Outros Autores: Gouveia, Mateus Henrique, Benazzo, Andrea, Ghirotto, Silvia, Fagundes, Nelson Jurandi Rosa, Leal, Thiago P., Magalhães, Wagner Carlos Santos, Pereira, Latife, Rodrigues, Maíra Ribeiro, Souza, Giordano Bruno Soares, Cabrera, Lilia, Berg, Douglas E., Gilman, Robert H., Bertorelle, Giorgio, Santos, Eduardo Tarazona
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UFRGS
Texto Completo: http://hdl.handle.net/10183/115088
Resumo: Background: Archaeology reports millenary cultural contacts between Peruvian Coast-Andes and the Amazon Yunga, a rainforest transitional region between Andes and Lower Amazonia. To clarify the relationships between cultural and biological evolution of these populations, in particular between Amazon Yungas and Andeans, we used DNA-sequence data, a model-based Bayesian approach and several statistical validations to infer a set of demographic parameters. Results: We found that the genetic diversity of the Shimaa (an Amazon Yunga population) is a subset of that of Quechuas from Central-Andes. Using the Isolation-with-Migration population genetics model, we inferred that the Shimaa ancestors were a small subgroup that split less than 5300 years ago (after the development of complex societies) from an ancestral Andean population. After the split, the most plausible scenario compatible with our results is that the ancestors of Shimaas moved toward the Peruvian Amazon Yunga and incorporated the culture and language of some of their neighbors, but not a substantial amount of their genes. We validated our results using Approximate Bayesian Computations, posterior predictive tests and the analysis of pseudo-observed datasets. Conclusions: We presented a case study in which model-based Bayesian approaches, combined with necessary statistical validations, shed light into the prehistoric demographic relationship between Andeans and a population from the Amazon Yunga. Our results offer a testable model for the peopling of this large transitional environmental region between the Andes and the Lower Amazonia. However, studies on larger samples and involving more populations of these regions are necessary to confirm if the predominant Andean biological origin of the Shimaas is the rule, and not the exception.
id UFRGS-2_05e9d22b1f48c2173aa69d27428f834d
oai_identifier_str oai:www.lume.ufrgs.br:10183/115088
network_acronym_str UFRGS-2
network_name_str Repositório Institucional da UFRGS
repository_id_str
spelling Scliar, Marília OliveiraGouveia, Mateus HenriqueBenazzo, AndreaGhirotto, SilviaFagundes, Nelson Jurandi RosaLeal, Thiago P.Magalhães, Wagner Carlos SantosPereira, LatifeRodrigues, Maíra RibeiroSouza, Giordano Bruno SoaresCabrera, LiliaBerg, Douglas E.Gilman, Robert H.Bertorelle, GiorgioSantos, Eduardo Tarazona2015-04-09T01:58:11Z20141471-2148http://hdl.handle.net/10183/115088000955979Background: Archaeology reports millenary cultural contacts between Peruvian Coast-Andes and the Amazon Yunga, a rainforest transitional region between Andes and Lower Amazonia. To clarify the relationships between cultural and biological evolution of these populations, in particular between Amazon Yungas and Andeans, we used DNA-sequence data, a model-based Bayesian approach and several statistical validations to infer a set of demographic parameters. Results: We found that the genetic diversity of the Shimaa (an Amazon Yunga population) is a subset of that of Quechuas from Central-Andes. Using the Isolation-with-Migration population genetics model, we inferred that the Shimaa ancestors were a small subgroup that split less than 5300 years ago (after the development of complex societies) from an ancestral Andean population. After the split, the most plausible scenario compatible with our results is that the ancestors of Shimaas moved toward the Peruvian Amazon Yunga and incorporated the culture and language of some of their neighbors, but not a substantial amount of their genes. We validated our results using Approximate Bayesian Computations, posterior predictive tests and the analysis of pseudo-observed datasets. Conclusions: We presented a case study in which model-based Bayesian approaches, combined with necessary statistical validations, shed light into the prehistoric demographic relationship between Andeans and a population from the Amazon Yunga. Our results offer a testable model for the peopling of this large transitional environmental region between the Andes and the Lower Amazonia. However, studies on larger samples and involving more populations of these regions are necessary to confirm if the predominant Andean biological origin of the Shimaas is the rule, and not the exception.application/pdfengBMC Evolutionary Biology. London. Vol. 14, no. 1, (Sept. 2014), [art.] 174AmeríndiosGenética de populaçõesEvolução humanaAmérica do SulPopulation genetics inferencesHuman evolutionNative americanBayesian inferences suggest that Amazon Yunga Natives diverged from Andeans less than 5000 ybp : implications for South American prehistoryEstrangeiroinfo:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da UFRGSinstname:Universidade Federal do Rio Grande do Sul (UFRGS)instacron:UFRGSTEXT000955979.pdf.txt000955979.pdf.txtExtracted Texttext/plain37838http://www.lume.ufrgs.br/bitstream/10183/115088/2/000955979.pdf.txtf7a78e6a827f60a51dc9a933a2862c43MD52ORIGINAL000955979.pdf000955979.pdfTexto completo (inglês)application/pdf1689435http://www.lume.ufrgs.br/bitstream/10183/115088/1/000955979.pdf58f8525b99321d4155815c62041481d8MD51THUMBNAIL000955979.pdf.jpg000955979.pdf.jpgGenerated Thumbnailimage/jpeg2017http://www.lume.ufrgs.br/bitstream/10183/115088/3/000955979.pdf.jpg9c427430539cfe814a17b12cc2a82932MD5310183/1150882022-10-28 04:47:43.028571oai:www.lume.ufrgs.br:10183/115088Repositório de PublicaçõesPUBhttps://lume.ufrgs.br/oai/requestopendoar:2022-10-28T07:47:43Repositório Institucional da UFRGS - Universidade Federal do Rio Grande do Sul (UFRGS)false
dc.title.pt_BR.fl_str_mv Bayesian inferences suggest that Amazon Yunga Natives diverged from Andeans less than 5000 ybp : implications for South American prehistory
title Bayesian inferences suggest that Amazon Yunga Natives diverged from Andeans less than 5000 ybp : implications for South American prehistory
spellingShingle Bayesian inferences suggest that Amazon Yunga Natives diverged from Andeans less than 5000 ybp : implications for South American prehistory
Scliar, Marília Oliveira
Ameríndios
Genética de populações
Evolução humana
América do Sul
Population genetics inferences
Human evolution
Native american
title_short Bayesian inferences suggest that Amazon Yunga Natives diverged from Andeans less than 5000 ybp : implications for South American prehistory
title_full Bayesian inferences suggest that Amazon Yunga Natives diverged from Andeans less than 5000 ybp : implications for South American prehistory
title_fullStr Bayesian inferences suggest that Amazon Yunga Natives diverged from Andeans less than 5000 ybp : implications for South American prehistory
title_full_unstemmed Bayesian inferences suggest that Amazon Yunga Natives diverged from Andeans less than 5000 ybp : implications for South American prehistory
title_sort Bayesian inferences suggest that Amazon Yunga Natives diverged from Andeans less than 5000 ybp : implications for South American prehistory
author Scliar, Marília Oliveira
author_facet Scliar, Marília Oliveira
Gouveia, Mateus Henrique
Benazzo, Andrea
Ghirotto, Silvia
Fagundes, Nelson Jurandi Rosa
Leal, Thiago P.
Magalhães, Wagner Carlos Santos
Pereira, Latife
Rodrigues, Maíra Ribeiro
Souza, Giordano Bruno Soares
Cabrera, Lilia
Berg, Douglas E.
Gilman, Robert H.
Bertorelle, Giorgio
Santos, Eduardo Tarazona
author_role author
author2 Gouveia, Mateus Henrique
Benazzo, Andrea
Ghirotto, Silvia
Fagundes, Nelson Jurandi Rosa
Leal, Thiago P.
Magalhães, Wagner Carlos Santos
Pereira, Latife
Rodrigues, Maíra Ribeiro
Souza, Giordano Bruno Soares
Cabrera, Lilia
Berg, Douglas E.
Gilman, Robert H.
Bertorelle, Giorgio
Santos, Eduardo Tarazona
author2_role author
author
author
author
author
author
author
author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Scliar, Marília Oliveira
Gouveia, Mateus Henrique
Benazzo, Andrea
Ghirotto, Silvia
Fagundes, Nelson Jurandi Rosa
Leal, Thiago P.
Magalhães, Wagner Carlos Santos
Pereira, Latife
Rodrigues, Maíra Ribeiro
Souza, Giordano Bruno Soares
Cabrera, Lilia
Berg, Douglas E.
Gilman, Robert H.
Bertorelle, Giorgio
Santos, Eduardo Tarazona
dc.subject.por.fl_str_mv Ameríndios
Genética de populações
Evolução humana
América do Sul
topic Ameríndios
Genética de populações
Evolução humana
América do Sul
Population genetics inferences
Human evolution
Native american
dc.subject.eng.fl_str_mv Population genetics inferences
Human evolution
Native american
description Background: Archaeology reports millenary cultural contacts between Peruvian Coast-Andes and the Amazon Yunga, a rainforest transitional region between Andes and Lower Amazonia. To clarify the relationships between cultural and biological evolution of these populations, in particular between Amazon Yungas and Andeans, we used DNA-sequence data, a model-based Bayesian approach and several statistical validations to infer a set of demographic parameters. Results: We found that the genetic diversity of the Shimaa (an Amazon Yunga population) is a subset of that of Quechuas from Central-Andes. Using the Isolation-with-Migration population genetics model, we inferred that the Shimaa ancestors were a small subgroup that split less than 5300 years ago (after the development of complex societies) from an ancestral Andean population. After the split, the most plausible scenario compatible with our results is that the ancestors of Shimaas moved toward the Peruvian Amazon Yunga and incorporated the culture and language of some of their neighbors, but not a substantial amount of their genes. We validated our results using Approximate Bayesian Computations, posterior predictive tests and the analysis of pseudo-observed datasets. Conclusions: We presented a case study in which model-based Bayesian approaches, combined with necessary statistical validations, shed light into the prehistoric demographic relationship between Andeans and a population from the Amazon Yunga. Our results offer a testable model for the peopling of this large transitional environmental region between the Andes and the Lower Amazonia. However, studies on larger samples and involving more populations of these regions are necessary to confirm if the predominant Andean biological origin of the Shimaas is the rule, and not the exception.
publishDate 2014
dc.date.issued.fl_str_mv 2014
dc.date.accessioned.fl_str_mv 2015-04-09T01:58:11Z
dc.type.driver.fl_str_mv Estrangeiro
info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/10183/115088
dc.identifier.issn.pt_BR.fl_str_mv 1471-2148
dc.identifier.nrb.pt_BR.fl_str_mv 000955979
identifier_str_mv 1471-2148
000955979
url http://hdl.handle.net/10183/115088
dc.language.iso.fl_str_mv eng
language eng
dc.relation.ispartof.pt_BR.fl_str_mv BMC Evolutionary Biology. London. Vol. 14, no. 1, (Sept. 2014), [art.] 174
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.source.none.fl_str_mv reponame:Repositório Institucional da UFRGS
instname:Universidade Federal do Rio Grande do Sul (UFRGS)
instacron:UFRGS
instname_str Universidade Federal do Rio Grande do Sul (UFRGS)
instacron_str UFRGS
institution UFRGS
reponame_str Repositório Institucional da UFRGS
collection Repositório Institucional da UFRGS
bitstream.url.fl_str_mv http://www.lume.ufrgs.br/bitstream/10183/115088/2/000955979.pdf.txt
http://www.lume.ufrgs.br/bitstream/10183/115088/1/000955979.pdf
http://www.lume.ufrgs.br/bitstream/10183/115088/3/000955979.pdf.jpg
bitstream.checksum.fl_str_mv f7a78e6a827f60a51dc9a933a2862c43
58f8525b99321d4155815c62041481d8
9c427430539cfe814a17b12cc2a82932
bitstream.checksumAlgorithm.fl_str_mv MD5
MD5
MD5
repository.name.fl_str_mv Repositório Institucional da UFRGS - Universidade Federal do Rio Grande do Sul (UFRGS)
repository.mail.fl_str_mv
_version_ 1798487282996477952