The germ cell marker dead end reveals alternatively spliced transcripts with dissimilar expression

Detalhes bibliográficos
Autor(a) principal: Vasconcelos, Ana Carina Nogueira
Data de Publicação: 2019
Outros Autores: Streit Júnior, Danilo Pedro, Octavera, Anna, Miwa, Misako, Kabeya, Naoki, Yoshizaki, Goro
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UFRGS
Texto Completo: http://hdl.handle.net/10183/225516
Resumo: Since the late 19th century, the Amazon species Colossoma macropomum (tambaqui) has been exploited commercially and the climate change has contributed to decline in tambaqui numbers. Although germ cell cryopreservation and transplantation can help preserve the species’ genetic resources semipermanently, its germ cell behavior has not been analyzed to date. In this study, we isolated the tambaqui’s dead end gene (dnd) homolog (tdnd) and used it as a molecular marker for germ cells to obtain basic information essential for transplantation. The amino acid sequence showed 98% similarity and 53% identity with the zebrafish dnd. Phylogenetic analysis and the presence of consensus motifs known for dnd revealed that tdnd encodes the dnd ortholog and its transcript is detectable only in the testes and ovaries, showing a strong positive signal in oocytes and spermatogonia. The tambaqui possesses, at least, three different transcripts of tdnd which show dissimilar expression profile in undifferentiated and sexually mature animals, suggesting that they play distinct roles in germline development and they may influence the choice of donors for the cell transplantation study.
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spelling Vasconcelos, Ana Carina NogueiraStreit Júnior, Danilo PedroOctavera, AnnaMiwa, MisakoKabeya, NaokiYoshizaki, Goro2021-08-11T04:47:02Z20192045-2322http://hdl.handle.net/10183/225516001107429Since the late 19th century, the Amazon species Colossoma macropomum (tambaqui) has been exploited commercially and the climate change has contributed to decline in tambaqui numbers. Although germ cell cryopreservation and transplantation can help preserve the species’ genetic resources semipermanently, its germ cell behavior has not been analyzed to date. In this study, we isolated the tambaqui’s dead end gene (dnd) homolog (tdnd) and used it as a molecular marker for germ cells to obtain basic information essential for transplantation. The amino acid sequence showed 98% similarity and 53% identity with the zebrafish dnd. Phylogenetic analysis and the presence of consensus motifs known for dnd revealed that tdnd encodes the dnd ortholog and its transcript is detectable only in the testes and ovaries, showing a strong positive signal in oocytes and spermatogonia. The tambaqui possesses, at least, three different transcripts of tdnd which show dissimilar expression profile in undifferentiated and sexually mature animals, suggesting that they play distinct roles in germline development and they may influence the choice of donors for the cell transplantation study.application/pdfengScientific reports. London. Vol. 9 (Feb. 2019), 2407, 10 p.TambaquiMarcador molecularGenética animalThe germ cell marker dead end reveals alternatively spliced transcripts with dissimilar expressionEstrangeiroinfo:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da UFRGSinstname:Universidade Federal do Rio Grande do Sul (UFRGS)instacron:UFRGSTEXT001107429.pdf.txt001107429.pdf.txtExtracted Texttext/plain40369http://www.lume.ufrgs.br/bitstream/10183/225516/2/001107429.pdf.txt19d60ff5d4ce6e17d4998d1e919cdd40MD52ORIGINAL001107429.pdfTexto completo (inglês)application/pdf3656347http://www.lume.ufrgs.br/bitstream/10183/225516/1/001107429.pdfc74fc8169d56dec713a168da17dde38dMD5110183/2255162021-08-18 04:30:17.521865oai:www.lume.ufrgs.br:10183/225516Repositório de PublicaçõesPUBhttps://lume.ufrgs.br/oai/requestopendoar:2021-08-18T07:30:17Repositório Institucional da UFRGS - Universidade Federal do Rio Grande do Sul (UFRGS)false
dc.title.pt_BR.fl_str_mv The germ cell marker dead end reveals alternatively spliced transcripts with dissimilar expression
title The germ cell marker dead end reveals alternatively spliced transcripts with dissimilar expression
spellingShingle The germ cell marker dead end reveals alternatively spliced transcripts with dissimilar expression
Vasconcelos, Ana Carina Nogueira
Tambaqui
Marcador molecular
Genética animal
title_short The germ cell marker dead end reveals alternatively spliced transcripts with dissimilar expression
title_full The germ cell marker dead end reveals alternatively spliced transcripts with dissimilar expression
title_fullStr The germ cell marker dead end reveals alternatively spliced transcripts with dissimilar expression
title_full_unstemmed The germ cell marker dead end reveals alternatively spliced transcripts with dissimilar expression
title_sort The germ cell marker dead end reveals alternatively spliced transcripts with dissimilar expression
author Vasconcelos, Ana Carina Nogueira
author_facet Vasconcelos, Ana Carina Nogueira
Streit Júnior, Danilo Pedro
Octavera, Anna
Miwa, Misako
Kabeya, Naoki
Yoshizaki, Goro
author_role author
author2 Streit Júnior, Danilo Pedro
Octavera, Anna
Miwa, Misako
Kabeya, Naoki
Yoshizaki, Goro
author2_role author
author
author
author
author
dc.contributor.author.fl_str_mv Vasconcelos, Ana Carina Nogueira
Streit Júnior, Danilo Pedro
Octavera, Anna
Miwa, Misako
Kabeya, Naoki
Yoshizaki, Goro
dc.subject.por.fl_str_mv Tambaqui
Marcador molecular
Genética animal
topic Tambaqui
Marcador molecular
Genética animal
description Since the late 19th century, the Amazon species Colossoma macropomum (tambaqui) has been exploited commercially and the climate change has contributed to decline in tambaqui numbers. Although germ cell cryopreservation and transplantation can help preserve the species’ genetic resources semipermanently, its germ cell behavior has not been analyzed to date. In this study, we isolated the tambaqui’s dead end gene (dnd) homolog (tdnd) and used it as a molecular marker for germ cells to obtain basic information essential for transplantation. The amino acid sequence showed 98% similarity and 53% identity with the zebrafish dnd. Phylogenetic analysis and the presence of consensus motifs known for dnd revealed that tdnd encodes the dnd ortholog and its transcript is detectable only in the testes and ovaries, showing a strong positive signal in oocytes and spermatogonia. The tambaqui possesses, at least, three different transcripts of tdnd which show dissimilar expression profile in undifferentiated and sexually mature animals, suggesting that they play distinct roles in germline development and they may influence the choice of donors for the cell transplantation study.
publishDate 2019
dc.date.issued.fl_str_mv 2019
dc.date.accessioned.fl_str_mv 2021-08-11T04:47:02Z
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dc.identifier.issn.pt_BR.fl_str_mv 2045-2322
dc.identifier.nrb.pt_BR.fl_str_mv 001107429
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001107429
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dc.relation.ispartof.pt_BR.fl_str_mv Scientific reports. London. Vol. 9 (Feb. 2019), 2407, 10 p.
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