Spring is coming: genetic analyses of the bud break date locus reveal candidate genes from the cold perception pathway to dormancy release in apple (Malus × domestica Borkh.)

Detalhes bibliográficos
Autor(a) principal: Miotto, Yohanna Evelyn
Data de Publicação: 2019
Outros Autores: Tessele, Carolina, Czermainski, Ana Beatriz Costa, Porto, Diogo Denardi, Falavigna, Vítor da Silveira, Sartor, Tiago, Cattani, Amanda Malvessi, Delatorre, Carla Andrea, Alencar, Sérgio Amorim de, Silva Junior, Orzenil B., Togawa, Roberto C., Costa, Marcos Mota do Carmo, Pappas Junior, Georgios J., Grynberg, Priscila, Oliveira, Paulo Ricardo Dias de, Kvitschal, Marcus Vinicius, Denardi, Frederico, Buffon, Vanessa, Revers, Luis Fernando
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UFRGS
Texto Completo: http://hdl.handle.net/10183/198207
Resumo: Chilling requirement (CR) for bud dormancy completion determines the time of bud break in apple (Malus × domestica Borkh.). The molecular control of bud dormancy is highly heritable, suggesting a strong genetic control of the trait. An available Infinium II SNP platform for genotyping containing 8,788 single nucleotide polymorphic markers was employed, and linkage maps were constructed in a F1 cross from the low CR M13/91 and the moderate CR cv. Fred Hough. These maps were used to identify quantitative trait loci (QTL) for bud break date as a trait related to dormancy release. A major QTL for bud break was detected at the beginning of linkage group 9 (LG9). This QTL remained stable during seven seasons in two different growing sites. To increase mapping efficiency in detecting contributing genes underlying this QTL, 182 additional SNP markers located at the locus for bud break were used. Combining linkage mapping and structural characterization of the region, the high proportion of the phenotypic variance in the trait explained by the QTL is related to the coincident positioning of Arabidopsis orthologs for ICE1, FLC, and PRE1 protein-coding genes. The proximity of these genes from the most explanatory markers of this QTL for bud break suggests potential genetic additive effects, reinforcing the hypothesis of inter-dependent mechanisms controlling dormancy induction and release in apple trees.
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spelling Miotto, Yohanna EvelynTessele, CarolinaCzermainski, Ana Beatriz CostaPorto, Diogo DenardiFalavigna, Vítor da SilveiraSartor, TiagoCattani, Amanda MalvessiDelatorre, Carla AndreaAlencar, Sérgio Amorim deSilva Junior, Orzenil B.Togawa, Roberto C.Costa, Marcos Mota do CarmoPappas Junior, Georgios J.Grynberg, PriscilaOliveira, Paulo Ricardo Dias deKvitschal, Marcus ViniciusDenardi, FredericoBuffon, VanessaRevers, Luis Fernando2019-08-22T02:31:51Z20191664-462Xhttp://hdl.handle.net/10183/198207001097357Chilling requirement (CR) for bud dormancy completion determines the time of bud break in apple (Malus × domestica Borkh.). The molecular control of bud dormancy is highly heritable, suggesting a strong genetic control of the trait. An available Infinium II SNP platform for genotyping containing 8,788 single nucleotide polymorphic markers was employed, and linkage maps were constructed in a F1 cross from the low CR M13/91 and the moderate CR cv. Fred Hough. These maps were used to identify quantitative trait loci (QTL) for bud break date as a trait related to dormancy release. A major QTL for bud break was detected at the beginning of linkage group 9 (LG9). This QTL remained stable during seven seasons in two different growing sites. To increase mapping efficiency in detecting contributing genes underlying this QTL, 182 additional SNP markers located at the locus for bud break were used. Combining linkage mapping and structural characterization of the region, the high proportion of the phenotypic variance in the trait explained by the QTL is related to the coincident positioning of Arabidopsis orthologs for ICE1, FLC, and PRE1 protein-coding genes. The proximity of these genes from the most explanatory markers of this QTL for bud break suggests potential genetic additive effects, reinforcing the hypothesis of inter-dependent mechanisms controlling dormancy induction and release in apple trees.application/pdfengFrontiers in plant science. Lausanne, Frontiers Media SA, 2019. Vol. 10, (Mar. 2019), [art.] 33, 13 p.MaçãDormênciaAppleBud dormancyChilling requirementLinkage mappingMdoFLCMdoICE1MdoPRE1Spring is coming: genetic analyses of the bud break date locus reveal candidate genes from the cold perception pathway to dormancy release in apple (Malus × domestica Borkh.)Estrangeiroinfo:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da UFRGSinstname:Universidade Federal do Rio Grande do Sul (UFRGS)instacron:UFRGSTEXT001097357.pdf.txt001097357.pdf.txtExtracted Texttext/plain72577http://www.lume.ufrgs.br/bitstream/10183/198207/2/001097357.pdf.txtfe1ceb0c3c85306a1df7e2fd0f90990aMD52ORIGINAL001097357.pdfTexto completo (inglês)application/pdf2202609http://www.lume.ufrgs.br/bitstream/10183/198207/1/001097357.pdf2ba83f4817aa30a95cdda8336d34ba4bMD5110183/1982072019-11-03 03:51:53.784034oai:www.lume.ufrgs.br:10183/198207Repositório de PublicaçõesPUBhttps://lume.ufrgs.br/oai/requestopendoar:2019-11-03T05:51:53Repositório Institucional da UFRGS - Universidade Federal do Rio Grande do Sul (UFRGS)false
dc.title.pt_BR.fl_str_mv Spring is coming: genetic analyses of the bud break date locus reveal candidate genes from the cold perception pathway to dormancy release in apple (Malus × domestica Borkh.)
title Spring is coming: genetic analyses of the bud break date locus reveal candidate genes from the cold perception pathway to dormancy release in apple (Malus × domestica Borkh.)
spellingShingle Spring is coming: genetic analyses of the bud break date locus reveal candidate genes from the cold perception pathway to dormancy release in apple (Malus × domestica Borkh.)
Miotto, Yohanna Evelyn
Maçã
Dormência
Apple
Bud dormancy
Chilling requirement
Linkage mapping
MdoFLC
MdoICE1
MdoPRE1
title_short Spring is coming: genetic analyses of the bud break date locus reveal candidate genes from the cold perception pathway to dormancy release in apple (Malus × domestica Borkh.)
title_full Spring is coming: genetic analyses of the bud break date locus reveal candidate genes from the cold perception pathway to dormancy release in apple (Malus × domestica Borkh.)
title_fullStr Spring is coming: genetic analyses of the bud break date locus reveal candidate genes from the cold perception pathway to dormancy release in apple (Malus × domestica Borkh.)
title_full_unstemmed Spring is coming: genetic analyses of the bud break date locus reveal candidate genes from the cold perception pathway to dormancy release in apple (Malus × domestica Borkh.)
title_sort Spring is coming: genetic analyses of the bud break date locus reveal candidate genes from the cold perception pathway to dormancy release in apple (Malus × domestica Borkh.)
author Miotto, Yohanna Evelyn
author_facet Miotto, Yohanna Evelyn
Tessele, Carolina
Czermainski, Ana Beatriz Costa
Porto, Diogo Denardi
Falavigna, Vítor da Silveira
Sartor, Tiago
Cattani, Amanda Malvessi
Delatorre, Carla Andrea
Alencar, Sérgio Amorim de
Silva Junior, Orzenil B.
Togawa, Roberto C.
Costa, Marcos Mota do Carmo
Pappas Junior, Georgios J.
Grynberg, Priscila
Oliveira, Paulo Ricardo Dias de
Kvitschal, Marcus Vinicius
Denardi, Frederico
Buffon, Vanessa
Revers, Luis Fernando
author_role author
author2 Tessele, Carolina
Czermainski, Ana Beatriz Costa
Porto, Diogo Denardi
Falavigna, Vítor da Silveira
Sartor, Tiago
Cattani, Amanda Malvessi
Delatorre, Carla Andrea
Alencar, Sérgio Amorim de
Silva Junior, Orzenil B.
Togawa, Roberto C.
Costa, Marcos Mota do Carmo
Pappas Junior, Georgios J.
Grynberg, Priscila
Oliveira, Paulo Ricardo Dias de
Kvitschal, Marcus Vinicius
Denardi, Frederico
Buffon, Vanessa
Revers, Luis Fernando
author2_role author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Miotto, Yohanna Evelyn
Tessele, Carolina
Czermainski, Ana Beatriz Costa
Porto, Diogo Denardi
Falavigna, Vítor da Silveira
Sartor, Tiago
Cattani, Amanda Malvessi
Delatorre, Carla Andrea
Alencar, Sérgio Amorim de
Silva Junior, Orzenil B.
Togawa, Roberto C.
Costa, Marcos Mota do Carmo
Pappas Junior, Georgios J.
Grynberg, Priscila
Oliveira, Paulo Ricardo Dias de
Kvitschal, Marcus Vinicius
Denardi, Frederico
Buffon, Vanessa
Revers, Luis Fernando
dc.subject.por.fl_str_mv Maçã
Dormência
topic Maçã
Dormência
Apple
Bud dormancy
Chilling requirement
Linkage mapping
MdoFLC
MdoICE1
MdoPRE1
dc.subject.eng.fl_str_mv Apple
Bud dormancy
Chilling requirement
Linkage mapping
MdoFLC
MdoICE1
MdoPRE1
description Chilling requirement (CR) for bud dormancy completion determines the time of bud break in apple (Malus × domestica Borkh.). The molecular control of bud dormancy is highly heritable, suggesting a strong genetic control of the trait. An available Infinium II SNP platform for genotyping containing 8,788 single nucleotide polymorphic markers was employed, and linkage maps were constructed in a F1 cross from the low CR M13/91 and the moderate CR cv. Fred Hough. These maps were used to identify quantitative trait loci (QTL) for bud break date as a trait related to dormancy release. A major QTL for bud break was detected at the beginning of linkage group 9 (LG9). This QTL remained stable during seven seasons in two different growing sites. To increase mapping efficiency in detecting contributing genes underlying this QTL, 182 additional SNP markers located at the locus for bud break were used. Combining linkage mapping and structural characterization of the region, the high proportion of the phenotypic variance in the trait explained by the QTL is related to the coincident positioning of Arabidopsis orthologs for ICE1, FLC, and PRE1 protein-coding genes. The proximity of these genes from the most explanatory markers of this QTL for bud break suggests potential genetic additive effects, reinforcing the hypothesis of inter-dependent mechanisms controlling dormancy induction and release in apple trees.
publishDate 2019
dc.date.accessioned.fl_str_mv 2019-08-22T02:31:51Z
dc.date.issued.fl_str_mv 2019
dc.type.driver.fl_str_mv Estrangeiro
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dc.language.iso.fl_str_mv eng
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dc.relation.ispartof.pt_BR.fl_str_mv Frontiers in plant science. Lausanne, Frontiers Media SA, 2019. Vol. 10, (Mar. 2019), [art.] 33, 13 p.
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