Identification of the capsule of Pasteurella Multocida isolates from cases of fowl cholera by multiplex PCR and comparison phenotipic methods

Detalhes bibliográficos
Autor(a) principal: Furian, Thales Quedi
Data de Publicação: 2014
Outros Autores: Borges, Karen Apellanis, Pilatti, Roberta Marmitt, Almeida, C., Nascimento, Vladimir Pinheiro do, Salle, Carlos Tadeu Pippi, Moraes, Hamilton Luiz de Souza
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UFRGS
Texto Completo: http://hdl.handle.net/10183/111994
Resumo: The ability of Pasteurella multocida to invade and multiply in its host is enhanced by the presence of the capsule, one of the most important virulence factors for this bacterium. Capsular typing methods are often used in epidemiological and pathogenesis studies of this agent. Five different serogroups have been identified based on serological typing. However, such tests are laborious, and agglutination of homologous antiserum may fail. The aim of this study was to develop a multiplex PCR protocol for the identification of the hyaD-hyaC and dcbF genes specific to serogroups A and D, respectively, and to compare these results with those of phenotypic tests for 54 strains isolated from fowl cholera cases in southern Brazil. The kappa coefficient and chisquare statistics were calculated to assess the agreement between the diagnostic methods and to determine the significance of the results, respectively. The multiplex PCR was able to detect the evaluated genes. Forty-nine strains (90.74%) were classified into serogroup A, and only two isolates (3.7%) were not identified as belonging to any of the serogroups analyzed. In contrast, with the phenotypic tests, only 41 strains (75.93%) were classified into serogroup A and 11 samples (20.37%) were unidentifiable. Of the strains analyzed, 70.37% were classified into the same serogroup (A) by both methods, and the kappa coefficient (k = 0.017) indicated poor agreement between the tests. Thus, multiplex PCR is an alternative for P. multocida capsular typing, as it allows the simultaneous and rapid detection of genes and also provides a greater strain-typing capacity.
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spelling Furian, Thales QuediBorges, Karen ApellanisPilatti, Roberta MarmittAlmeida, C.Nascimento, Vladimir Pinheiro doSalle, Carlos Tadeu PippiMoraes, Hamilton Luiz de Souza2015-03-13T01:58:36Z20141516-635Xhttp://hdl.handle.net/10183/111994000931148The ability of Pasteurella multocida to invade and multiply in its host is enhanced by the presence of the capsule, one of the most important virulence factors for this bacterium. Capsular typing methods are often used in epidemiological and pathogenesis studies of this agent. Five different serogroups have been identified based on serological typing. However, such tests are laborious, and agglutination of homologous antiserum may fail. The aim of this study was to develop a multiplex PCR protocol for the identification of the hyaD-hyaC and dcbF genes specific to serogroups A and D, respectively, and to compare these results with those of phenotypic tests for 54 strains isolated from fowl cholera cases in southern Brazil. The kappa coefficient and chisquare statistics were calculated to assess the agreement between the diagnostic methods and to determine the significance of the results, respectively. The multiplex PCR was able to detect the evaluated genes. Forty-nine strains (90.74%) were classified into serogroup A, and only two isolates (3.7%) were not identified as belonging to any of the serogroups analyzed. In contrast, with the phenotypic tests, only 41 strains (75.93%) were classified into serogroup A and 11 samples (20.37%) were unidentifiable. Of the strains analyzed, 70.37% were classified into the same serogroup (A) by both methods, and the kappa coefficient (k = 0.017) indicated poor agreement between the tests. Thus, multiplex PCR is an alternative for P. multocida capsular typing, as it allows the simultaneous and rapid detection of genes and also provides a greater strain-typing capacity.application/pdfengRevista brasileira de ciência avícola= Brazilian journal of poultry science. Vol. 16, n.2 (2014), p. 31-36Patologia aviariaDiagnostico molecularSanidade avícolaMolecular diagnosisNon-serologic testsPasteurellosisSerogroupIdentification of the capsule of Pasteurella Multocida isolates from cases of fowl cholera by multiplex PCR and comparison phenotipic methodsinfo:eu-repo/semantics/articleinfo:eu-repo/semantics/otherinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da UFRGSinstname:Universidade Federal do Rio Grande do Sul (UFRGS)instacron:UFRGSORIGINAL000931148.pdf000931148.pdfTexto completo (inglês)application/pdf139095http://www.lume.ufrgs.br/bitstream/10183/111994/1/000931148.pdf0287e22217fb08013b74b6c85a5f46d1MD51TEXT000931148.pdf.txt000931148.pdf.txtExtracted Texttext/plain27305http://www.lume.ufrgs.br/bitstream/10183/111994/2/000931148.pdf.txt00bd554d5b8a0859f0b17b9a0a16493aMD52THUMBNAIL000931148.pdf.jpg000931148.pdf.jpgGenerated Thumbnailimage/jpeg2046http://www.lume.ufrgs.br/bitstream/10183/111994/3/000931148.pdf.jpgc0b0a5b59c73a5d89c11a88b7601aac2MD5310183/1119942018-10-08 08:16:17.512oai:www.lume.ufrgs.br:10183/111994Repositório de PublicaçõesPUBhttps://lume.ufrgs.br/oai/requestopendoar:2018-10-08T11:16:17Repositório Institucional da UFRGS - Universidade Federal do Rio Grande do Sul (UFRGS)false
dc.title.pt_BR.fl_str_mv Identification of the capsule of Pasteurella Multocida isolates from cases of fowl cholera by multiplex PCR and comparison phenotipic methods
title Identification of the capsule of Pasteurella Multocida isolates from cases of fowl cholera by multiplex PCR and comparison phenotipic methods
spellingShingle Identification of the capsule of Pasteurella Multocida isolates from cases of fowl cholera by multiplex PCR and comparison phenotipic methods
Furian, Thales Quedi
Patologia aviaria
Diagnostico molecular
Sanidade avícola
Molecular diagnosis
Non-serologic tests
Pasteurellosis
Serogroup
title_short Identification of the capsule of Pasteurella Multocida isolates from cases of fowl cholera by multiplex PCR and comparison phenotipic methods
title_full Identification of the capsule of Pasteurella Multocida isolates from cases of fowl cholera by multiplex PCR and comparison phenotipic methods
title_fullStr Identification of the capsule of Pasteurella Multocida isolates from cases of fowl cholera by multiplex PCR and comparison phenotipic methods
title_full_unstemmed Identification of the capsule of Pasteurella Multocida isolates from cases of fowl cholera by multiplex PCR and comparison phenotipic methods
title_sort Identification of the capsule of Pasteurella Multocida isolates from cases of fowl cholera by multiplex PCR and comparison phenotipic methods
author Furian, Thales Quedi
author_facet Furian, Thales Quedi
Borges, Karen Apellanis
Pilatti, Roberta Marmitt
Almeida, C.
Nascimento, Vladimir Pinheiro do
Salle, Carlos Tadeu Pippi
Moraes, Hamilton Luiz de Souza
author_role author
author2 Borges, Karen Apellanis
Pilatti, Roberta Marmitt
Almeida, C.
Nascimento, Vladimir Pinheiro do
Salle, Carlos Tadeu Pippi
Moraes, Hamilton Luiz de Souza
author2_role author
author
author
author
author
author
dc.contributor.author.fl_str_mv Furian, Thales Quedi
Borges, Karen Apellanis
Pilatti, Roberta Marmitt
Almeida, C.
Nascimento, Vladimir Pinheiro do
Salle, Carlos Tadeu Pippi
Moraes, Hamilton Luiz de Souza
dc.subject.por.fl_str_mv Patologia aviaria
Diagnostico molecular
Sanidade avícola
topic Patologia aviaria
Diagnostico molecular
Sanidade avícola
Molecular diagnosis
Non-serologic tests
Pasteurellosis
Serogroup
dc.subject.eng.fl_str_mv Molecular diagnosis
Non-serologic tests
Pasteurellosis
Serogroup
description The ability of Pasteurella multocida to invade and multiply in its host is enhanced by the presence of the capsule, one of the most important virulence factors for this bacterium. Capsular typing methods are often used in epidemiological and pathogenesis studies of this agent. Five different serogroups have been identified based on serological typing. However, such tests are laborious, and agglutination of homologous antiserum may fail. The aim of this study was to develop a multiplex PCR protocol for the identification of the hyaD-hyaC and dcbF genes specific to serogroups A and D, respectively, and to compare these results with those of phenotypic tests for 54 strains isolated from fowl cholera cases in southern Brazil. The kappa coefficient and chisquare statistics were calculated to assess the agreement between the diagnostic methods and to determine the significance of the results, respectively. The multiplex PCR was able to detect the evaluated genes. Forty-nine strains (90.74%) were classified into serogroup A, and only two isolates (3.7%) were not identified as belonging to any of the serogroups analyzed. In contrast, with the phenotypic tests, only 41 strains (75.93%) were classified into serogroup A and 11 samples (20.37%) were unidentifiable. Of the strains analyzed, 70.37% were classified into the same serogroup (A) by both methods, and the kappa coefficient (k = 0.017) indicated poor agreement between the tests. Thus, multiplex PCR is an alternative for P. multocida capsular typing, as it allows the simultaneous and rapid detection of genes and also provides a greater strain-typing capacity.
publishDate 2014
dc.date.issued.fl_str_mv 2014
dc.date.accessioned.fl_str_mv 2015-03-13T01:58:36Z
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dc.relation.ispartof.pt_BR.fl_str_mv Revista brasileira de ciência avícola= Brazilian journal of poultry science. Vol. 16, n.2 (2014), p. 31-36
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