Genetic Diversity of Bertholletia excelsa Bonpl.: A Native Species of the Amazon Rainforest

Detalhes bibliográficos
Autor(a) principal: Carpejani,Adriano Aygnes
Data de Publicação: 2020
Outros Autores: Pena,Guilherme Ferreira, Vieira,Felipe Sakamoto, Tiago,Poliana Vicente, Rossi,Ana Aparecida Bandini
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Floresta e Ambiente
Texto Completo: http://old.scielo.br/scielo.php?script=sci_arttext&pid=S2179-80872020000400122
Resumo: Abstract In view of the economic and environmental importance of Bertholletia excelsa Bonpl. for the Amazon and the reducing natural habitat area of this species, the present study proposes to examine genetic variability among accessions of Brazil nut from the Amazon rainforest. Seventeen native Brazil nut genotypes were sampled from Sinop-MT and the genomic DNA were amplified using 15 inter-simple sequence repeat (ISSR) markers. The percent polymorphism and the polymorphism information content (PIC) of each primer were determined. The primers amplified 84.62% of the polymorphic bands and 15.38% of the monomorphic bands. The PIC for each primer ranged from 0 to 0.68. The Unweighted Pair Group Method with Arithmetic Mean (UPGMA) was the most efficient in group representation, as it showed the highest cophenetic correlation coefficient (CCC = 0.92), the lowest stress (12.31%) and the lowest distortion (1.51%). The use of ISSR markers was an efficient tool in the study of genetic diversity among Brazil nut genotypes, and the genetic diversity found can be used for conservation and pre-breeding programs for this crop.
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spelling Genetic Diversity of Bertholletia excelsa Bonpl.: A Native Species of the Amazon RainforestISSRbrazil nutconservationAbstract In view of the economic and environmental importance of Bertholletia excelsa Bonpl. for the Amazon and the reducing natural habitat area of this species, the present study proposes to examine genetic variability among accessions of Brazil nut from the Amazon rainforest. Seventeen native Brazil nut genotypes were sampled from Sinop-MT and the genomic DNA were amplified using 15 inter-simple sequence repeat (ISSR) markers. The percent polymorphism and the polymorphism information content (PIC) of each primer were determined. The primers amplified 84.62% of the polymorphic bands and 15.38% of the monomorphic bands. The PIC for each primer ranged from 0 to 0.68. The Unweighted Pair Group Method with Arithmetic Mean (UPGMA) was the most efficient in group representation, as it showed the highest cophenetic correlation coefficient (CCC = 0.92), the lowest stress (12.31%) and the lowest distortion (1.51%). The use of ISSR markers was an efficient tool in the study of genetic diversity among Brazil nut genotypes, and the genetic diversity found can be used for conservation and pre-breeding programs for this crop.Instituto de Florestas da Universidade Federal Rural do Rio de Janeiro2020-01-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S2179-80872020000400122Floresta e Ambiente v.27 n.4 2020reponame:Floresta e Ambienteinstname:Universidade Federal do Rio de Janeiro (UFRJ)instacron:UFRJ10.1590/2179-8087-floram-2018-0180info:eu-repo/semantics/openAccessCarpejani,Adriano AygnesPena,Guilherme FerreiraVieira,Felipe SakamotoTiago,Poliana VicenteRossi,Ana Aparecida Bandinieng2021-06-21T00:00:00Zoai:scielo:S2179-80872020000400122Revistahttps://www.floram.org/PUBhttps://old.scielo.br/oai/scielo-oai.phpfloramjournal@gmail.com||floram@ufrrj.br||2179-80871415-0980opendoar:2021-06-21T00:00Floresta e Ambiente - Universidade Federal do Rio de Janeiro (UFRJ)false
dc.title.none.fl_str_mv Genetic Diversity of Bertholletia excelsa Bonpl.: A Native Species of the Amazon Rainforest
title Genetic Diversity of Bertholletia excelsa Bonpl.: A Native Species of the Amazon Rainforest
spellingShingle Genetic Diversity of Bertholletia excelsa Bonpl.: A Native Species of the Amazon Rainforest
Carpejani,Adriano Aygnes
ISSR
brazil nut
conservation
title_short Genetic Diversity of Bertholletia excelsa Bonpl.: A Native Species of the Amazon Rainforest
title_full Genetic Diversity of Bertholletia excelsa Bonpl.: A Native Species of the Amazon Rainforest
title_fullStr Genetic Diversity of Bertholletia excelsa Bonpl.: A Native Species of the Amazon Rainforest
title_full_unstemmed Genetic Diversity of Bertholletia excelsa Bonpl.: A Native Species of the Amazon Rainforest
title_sort Genetic Diversity of Bertholletia excelsa Bonpl.: A Native Species of the Amazon Rainforest
author Carpejani,Adriano Aygnes
author_facet Carpejani,Adriano Aygnes
Pena,Guilherme Ferreira
Vieira,Felipe Sakamoto
Tiago,Poliana Vicente
Rossi,Ana Aparecida Bandini
author_role author
author2 Pena,Guilherme Ferreira
Vieira,Felipe Sakamoto
Tiago,Poliana Vicente
Rossi,Ana Aparecida Bandini
author2_role author
author
author
author
dc.contributor.author.fl_str_mv Carpejani,Adriano Aygnes
Pena,Guilherme Ferreira
Vieira,Felipe Sakamoto
Tiago,Poliana Vicente
Rossi,Ana Aparecida Bandini
dc.subject.por.fl_str_mv ISSR
brazil nut
conservation
topic ISSR
brazil nut
conservation
description Abstract In view of the economic and environmental importance of Bertholletia excelsa Bonpl. for the Amazon and the reducing natural habitat area of this species, the present study proposes to examine genetic variability among accessions of Brazil nut from the Amazon rainforest. Seventeen native Brazil nut genotypes were sampled from Sinop-MT and the genomic DNA were amplified using 15 inter-simple sequence repeat (ISSR) markers. The percent polymorphism and the polymorphism information content (PIC) of each primer were determined. The primers amplified 84.62% of the polymorphic bands and 15.38% of the monomorphic bands. The PIC for each primer ranged from 0 to 0.68. The Unweighted Pair Group Method with Arithmetic Mean (UPGMA) was the most efficient in group representation, as it showed the highest cophenetic correlation coefficient (CCC = 0.92), the lowest stress (12.31%) and the lowest distortion (1.51%). The use of ISSR markers was an efficient tool in the study of genetic diversity among Brazil nut genotypes, and the genetic diversity found can be used for conservation and pre-breeding programs for this crop.
publishDate 2020
dc.date.none.fl_str_mv 2020-01-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://old.scielo.br/scielo.php?script=sci_arttext&pid=S2179-80872020000400122
url http://old.scielo.br/scielo.php?script=sci_arttext&pid=S2179-80872020000400122
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 10.1590/2179-8087-floram-2018-0180
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv text/html
dc.publisher.none.fl_str_mv Instituto de Florestas da Universidade Federal Rural do Rio de Janeiro
publisher.none.fl_str_mv Instituto de Florestas da Universidade Federal Rural do Rio de Janeiro
dc.source.none.fl_str_mv Floresta e Ambiente v.27 n.4 2020
reponame:Floresta e Ambiente
instname:Universidade Federal do Rio de Janeiro (UFRJ)
instacron:UFRJ
instname_str Universidade Federal do Rio de Janeiro (UFRJ)
instacron_str UFRJ
institution UFRJ
reponame_str Floresta e Ambiente
collection Floresta e Ambiente
repository.name.fl_str_mv Floresta e Ambiente - Universidade Federal do Rio de Janeiro (UFRJ)
repository.mail.fl_str_mv floramjournal@gmail.com||floram@ufrrj.br||
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