Genetic diversity analysis of Varronia curassavica Jacq. accessions using ISSR markers

Detalhes bibliográficos
Autor(a) principal: Brito, Fabiany de Andrade
Data de Publicação: 2016
Outros Autores: Nizio, Daniela Aparecida de Castro, Muniz, Ana Veruska Cruz da Silva, Diniz, Leandro Eugenio Cardamone, Rabbani, Allívia Rouse Carregosa, Arrigoni-Blank, Maria de Fátima, Carvalho, Sheila Valéria Álvares, Figueira, Glyn Mara, Montanari Junior, Ilio, Blank, Arie Fitzgerald
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UFS
Texto Completo: http://ri.ufs.br/jspui/handle/riufs/7286
Resumo: Varronia curassavica Jacq. is a medicinal and aromatic plant from Brazil with significant economic importance. Studies on genetic diversity in active germplasm banks (AGB) are essential for conservation and breeding programs. The aim of this study was to analyze the genetic diversity of V. curassavica accessions of the AGB of Medicinal and Aromatic Plants of the Federal University of Sergipe (UFS), using inter-simple sequence repeat molecular markers. Twentyfour primers were tested, and 14 were polymorphic and informative, resulting in 149 bands with 97.98% polymorphism. The UPGMA dendrogram divided the accessions into Clusters I and II. Jaccard similarity coefficients for pair-wise comparisons of accessions ranged between 0.24 and 0.78. The pairs of accessions VCUR-001/VCUR-503, VCUR-001/VCUR-504, and VCUR-104/VCUR-501 showed relatively low similarity (0.24), and the pair of accessions VCUR-402/VCUR403 showed medium similarity (0.78). Twenty-eight accessions were divided into three distinct clusters, according to the STRUCTURE analysis. The genetic diversity of V. curassavica in the AGB of UFS is low to medium, and it requires expansion. Accession VCUR-802 is the most suitable for selection in breeding program of this species, since it clearly represents all of the diversity present in the AGB.
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spelling Brito, Fabiany de AndradeNizio, Daniela Aparecida de CastroMuniz, Ana Veruska Cruz da SilvaDiniz, Leandro Eugenio CardamoneRabbani, Allívia Rouse CarregosaArrigoni-Blank, Maria de FátimaCarvalho, Sheila Valéria ÁlvaresFigueira, Glyn MaraMontanari Junior, IlioBlank, Arie Fitzgerald2018-02-01T12:19:30Z2018-02-01T12:19:30Z2016BRITO, F. de A. et al. Genetic diversity analysis of Varronia curassavica Jacq. accessions using ISSR markers. Genetics and Molecular Research, Ribeirão Preto, v. 15, n. 3, 2016. Disponível em: <https://www.geneticsmr.com/abstract/genetic-diversity-analysis-of-varronia-curassavica-jacq-accessions-using-issr-markers-1684.html>. Acesso em: 01 fev. 2018.1676-5680http://ri.ufs.br/jspui/handle/riufs/7286Creative Commons Atribuição-Não Comercial-Compartilha Igual 4.0 Internacional (CC BY-NC-SA 4.0)engFundação de Pesquisas Científicas de Ribeirão Preto (FUNPEC-RP)Genetics and Molecular ResearchVarronia curassavicaConservationDiversityISSRConservaçãoDiversidadeGenetic diversity analysis of Varronia curassavica Jacq. accessions using ISSR markersinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleVarronia curassavica Jacq. is a medicinal and aromatic plant from Brazil with significant economic importance. Studies on genetic diversity in active germplasm banks (AGB) are essential for conservation and breeding programs. The aim of this study was to analyze the genetic diversity of V. curassavica accessions of the AGB of Medicinal and Aromatic Plants of the Federal University of Sergipe (UFS), using inter-simple sequence repeat molecular markers. Twentyfour primers were tested, and 14 were polymorphic and informative, resulting in 149 bands with 97.98% polymorphism. The UPGMA dendrogram divided the accessions into Clusters I and II. Jaccard similarity coefficients for pair-wise comparisons of accessions ranged between 0.24 and 0.78. The pairs of accessions VCUR-001/VCUR-503, VCUR-001/VCUR-504, and VCUR-104/VCUR-501 showed relatively low similarity (0.24), and the pair of accessions VCUR-402/VCUR403 showed medium similarity (0.78). Twenty-eight accessions were divided into three distinct clusters, according to the STRUCTURE analysis. The genetic diversity of V. curassavica in the AGB of UFS is low to medium, and it requires expansion. 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dc.title.pt_BR.fl_str_mv Genetic diversity analysis of Varronia curassavica Jacq. accessions using ISSR markers
title Genetic diversity analysis of Varronia curassavica Jacq. accessions using ISSR markers
spellingShingle Genetic diversity analysis of Varronia curassavica Jacq. accessions using ISSR markers
Brito, Fabiany de Andrade
Varronia curassavica
Conservation
Diversity
ISSR
Conservação
Diversidade
title_short Genetic diversity analysis of Varronia curassavica Jacq. accessions using ISSR markers
title_full Genetic diversity analysis of Varronia curassavica Jacq. accessions using ISSR markers
title_fullStr Genetic diversity analysis of Varronia curassavica Jacq. accessions using ISSR markers
title_full_unstemmed Genetic diversity analysis of Varronia curassavica Jacq. accessions using ISSR markers
title_sort Genetic diversity analysis of Varronia curassavica Jacq. accessions using ISSR markers
author Brito, Fabiany de Andrade
author_facet Brito, Fabiany de Andrade
Nizio, Daniela Aparecida de Castro
Muniz, Ana Veruska Cruz da Silva
Diniz, Leandro Eugenio Cardamone
Rabbani, Allívia Rouse Carregosa
Arrigoni-Blank, Maria de Fátima
Carvalho, Sheila Valéria Álvares
Figueira, Glyn Mara
Montanari Junior, Ilio
Blank, Arie Fitzgerald
author_role author
author2 Nizio, Daniela Aparecida de Castro
Muniz, Ana Veruska Cruz da Silva
Diniz, Leandro Eugenio Cardamone
Rabbani, Allívia Rouse Carregosa
Arrigoni-Blank, Maria de Fátima
Carvalho, Sheila Valéria Álvares
Figueira, Glyn Mara
Montanari Junior, Ilio
Blank, Arie Fitzgerald
author2_role author
author
author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Brito, Fabiany de Andrade
Nizio, Daniela Aparecida de Castro
Muniz, Ana Veruska Cruz da Silva
Diniz, Leandro Eugenio Cardamone
Rabbani, Allívia Rouse Carregosa
Arrigoni-Blank, Maria de Fátima
Carvalho, Sheila Valéria Álvares
Figueira, Glyn Mara
Montanari Junior, Ilio
Blank, Arie Fitzgerald
dc.subject.eng.fl_str_mv Varronia curassavica
Conservation
Diversity
ISSR
topic Varronia curassavica
Conservation
Diversity
ISSR
Conservação
Diversidade
dc.subject.por.fl_str_mv Conservação
Diversidade
description Varronia curassavica Jacq. is a medicinal and aromatic plant from Brazil with significant economic importance. Studies on genetic diversity in active germplasm banks (AGB) are essential for conservation and breeding programs. The aim of this study was to analyze the genetic diversity of V. curassavica accessions of the AGB of Medicinal and Aromatic Plants of the Federal University of Sergipe (UFS), using inter-simple sequence repeat molecular markers. Twentyfour primers were tested, and 14 were polymorphic and informative, resulting in 149 bands with 97.98% polymorphism. The UPGMA dendrogram divided the accessions into Clusters I and II. Jaccard similarity coefficients for pair-wise comparisons of accessions ranged between 0.24 and 0.78. The pairs of accessions VCUR-001/VCUR-503, VCUR-001/VCUR-504, and VCUR-104/VCUR-501 showed relatively low similarity (0.24), and the pair of accessions VCUR-402/VCUR403 showed medium similarity (0.78). Twenty-eight accessions were divided into three distinct clusters, according to the STRUCTURE analysis. The genetic diversity of V. curassavica in the AGB of UFS is low to medium, and it requires expansion. Accession VCUR-802 is the most suitable for selection in breeding program of this species, since it clearly represents all of the diversity present in the AGB.
publishDate 2016
dc.date.issued.fl_str_mv 2016
dc.date.accessioned.fl_str_mv 2018-02-01T12:19:30Z
dc.date.available.fl_str_mv 2018-02-01T12:19:30Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
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dc.identifier.citation.fl_str_mv BRITO, F. de A. et al. Genetic diversity analysis of Varronia curassavica Jacq. accessions using ISSR markers. Genetics and Molecular Research, Ribeirão Preto, v. 15, n. 3, 2016. Disponível em: <https://www.geneticsmr.com/abstract/genetic-diversity-analysis-of-varronia-curassavica-jacq-accessions-using-issr-markers-1684.html>. Acesso em: 01 fev. 2018.
dc.identifier.uri.fl_str_mv http://ri.ufs.br/jspui/handle/riufs/7286
dc.identifier.issn.none.fl_str_mv 1676-5680
dc.identifier.license.pt_BR.fl_str_mv Creative Commons Atribuição-Não Comercial-Compartilha Igual 4.0 Internacional (CC BY-NC-SA 4.0)
identifier_str_mv BRITO, F. de A. et al. Genetic diversity analysis of Varronia curassavica Jacq. accessions using ISSR markers. Genetics and Molecular Research, Ribeirão Preto, v. 15, n. 3, 2016. Disponível em: <https://www.geneticsmr.com/abstract/genetic-diversity-analysis-of-varronia-curassavica-jacq-accessions-using-issr-markers-1684.html>. Acesso em: 01 fev. 2018.
1676-5680
Creative Commons Atribuição-Não Comercial-Compartilha Igual 4.0 Internacional (CC BY-NC-SA 4.0)
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