Genetic variability of tambaqui broodstocks in the Brazilian state of Pará

Detalhes bibliográficos
Autor(a) principal: Ferreira, Leandro de Araújo
Data de Publicação: 2019
Outros Autores: Fazzi-Gomes, Paola Fabiana, Guerreiro, Sávio, Rodrigues, Marília Danyelle Nunes, Ribeiro-dos-Santos, Ândrea Kely, Santos, Sidney, Hamoy, Igor
Tipo de documento: Artigo
Idioma: eng
Título da fonte: LOCUS Repositório Institucional da UFV
Texto Completo: https://locus.ufv.br//handle/123456789/30897
https://doi.org/10.1590/rbz4820180106
Resumo: The present study evaluated the genetic variability of the broodstocks of tambaqui hatcheries in the Brazilian state of Pará. Samples were obtained from the caudal fin of 110 broodstocks from one hatchery in each of four municipalities (Santarém, Peixe-Boi, Breu-Branco, and Ulianópolis), representing all the individuals of each hatchery stock. The samples were genotyped using the multiplex system microsatellite markers. Data were used to calculate observed and expected heterozygosity, number of alleles per locus, and allelic richness. The effective population size and inbreeding coefficient were also calculated. The genetic differentiation between populations was evaluated by using FST, and population structuring by the most likely number of genetically homogenous populations and Unweighted Pair Group Method (UPGMA); the arithmetic means were based on Nei’s. The indices indicated a loss of genetic variability in the broodstocks from Ulianópolis, Peixe-Boi, and Breu-Branco in comparison with wild tambaqui populations, although this was not apparent in the Santarém stock. A moderate level of genetic differentiation was found among the tambaqui broodstocks based on the FST estimates, which were reinforced by the structuring found in the Bayesian analysis and UPGMA. This reflects the domestication process, given that no such structuring is found in natural tambaqui populations. This moderate genetic differentiation associated with the loss of genetic variability found in the four tambaqui broodstocks from the state of Pará provides important insights for the development of future programs of genetic improvement, as well as the conservation of the genetic diversity of these stocks
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spelling Ferreira, Leandro de AraújoFazzi-Gomes, Paola FabianaGuerreiro, SávioRodrigues, Marília Danyelle NunesRibeiro-dos-Santos, Ândrea KelySantos, SidneyHamoy, Igor2023-05-17T13:58:29Z2023-05-17T13:58:29Z2019-06-06Ferreira, L. A.; Fazzi-Gomes, P. F.; Guerreiro, S.; Rodrigues, M. D. N.; Ribeiro-dos-Santos, A. K.; Santos, S. and Hamoy, I. 2019. Genetic variability of tambaqui broodstocks in the Brazilian state of Pará. Revista Brasileira de Zootecnia 48:e201801061806-9290https://locus.ufv.br//handle/123456789/30897https://doi.org/10.1590/rbz4820180106The present study evaluated the genetic variability of the broodstocks of tambaqui hatcheries in the Brazilian state of Pará. Samples were obtained from the caudal fin of 110 broodstocks from one hatchery in each of four municipalities (Santarém, Peixe-Boi, Breu-Branco, and Ulianópolis), representing all the individuals of each hatchery stock. The samples were genotyped using the multiplex system microsatellite markers. Data were used to calculate observed and expected heterozygosity, number of alleles per locus, and allelic richness. The effective population size and inbreeding coefficient were also calculated. The genetic differentiation between populations was evaluated by using FST, and population structuring by the most likely number of genetically homogenous populations and Unweighted Pair Group Method (UPGMA); the arithmetic means were based on Nei’s. The indices indicated a loss of genetic variability in the broodstocks from Ulianópolis, Peixe-Boi, and Breu-Branco in comparison with wild tambaqui populations, although this was not apparent in the Santarém stock. A moderate level of genetic differentiation was found among the tambaqui broodstocks based on the FST estimates, which were reinforced by the structuring found in the Bayesian analysis and UPGMA. This reflects the domestication process, given that no such structuring is found in natural tambaqui populations. This moderate genetic differentiation associated with the loss of genetic variability found in the four tambaqui broodstocks from the state of Pará provides important insights for the development of future programs of genetic improvement, as well as the conservation of the genetic diversity of these stocksengBrazilian Journal of Animal ScienceR. Bras. Zootec., 48:e20180106, 2019Creative Commons Attribution Licenseinfo:eu-repo/semantics/openAccessColossoma macropomumfishgenetic diversityhatcheriesGenetic variability of tambaqui broodstocks in the Brazilian state of Paráinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlereponame:LOCUS Repositório Institucional da UFVinstname:Universidade Federal de Viçosa (UFV)instacron:UFVORIGINAL1806-9290-rbz-48-e20180106.pdf1806-9290-rbz-48-e20180106.pdfartigoapplication/pdf327521https://locus.ufv.br//bitstream/123456789/30897/1/1806-9290-rbz-48-e20180106.pdf7d0d5db2c7e26fd19c9d4665b7e8303cMD51LICENSElicense.txtlicense.txttext/plain; charset=utf-81748https://locus.ufv.br//bitstream/123456789/30897/2/license.txt8a4605be74aa9ea9d79846c1fba20a33MD52123456789/308972023-05-17 10:58:30.548oai:locus.ufv.br:123456789/30897Tk9URTogUExBQ0UgWU9VUiBPV04gTElDRU5TRSBIRVJFClRoaXMgc2FtcGxlIGxpY2Vuc2UgaXMgcHJvdmlkZWQgZm9yIGluZm9ybWF0aW9uYWwgcHVycG9zZXMgb25seS4KCk5PTi1FWENMVVNJVkUgRElTVFJJQlVUSU9OIExJQ0VOU0UKCkJ5IHNpZ25pbmcgYW5kIHN1Ym1pdHRpbmcgdGhpcyBsaWNlbnNlLCB5b3UgKHRoZSBhdXRob3Iocykgb3IgY29weXJpZ2h0Cm93bmVyKSBncmFudHMgdG8gRFNwYWNlIFVuaXZlcnNpdHkgKERTVSkgdGhlIG5vbi1leGNsdXNpdmUgcmlnaHQgdG8gcmVwcm9kdWNlLAp0cmFuc2xhdGUgKGFzIGRlZmluZWQgYmVsb3cpLCBhbmQvb3IgZGlzdHJpYnV0ZSB5b3VyIHN1Ym1pc3Npb24gKGluY2x1ZGluZwp0aGUgYWJzdHJhY3QpIHdvcmxkd2lkZSBpbiBwcmludCBhbmQgZWxlY3Ryb25pYyBmb3JtYXQgYW5kIGluIGFueSBtZWRpdW0sCmluY2x1ZGluZyBidXQgbm90IGxpbWl0ZWQgdG8gYXVkaW8gb3IgdmlkZW8uCgpZb3UgYWdyZWUgdGhhdCBEU1UgbWF5LCB3aXRob3V0IGNoYW5naW5nIHRoZSBjb250ZW50LCB0cmFuc2xhdGUgdGhlCnN1Ym1pc3Npb24gdG8gYW55IG1lZGl1bSBvciBmb3JtYXQgZm9yIHRoZSBwdXJwb3NlIG9mIHByZXNlcnZhdGlvbi4KCllvdSBhbHNvIGFncmVlIHRoYXQgRFNVIG1heSBrZWVwIG1vcmUgdGhhbiBvbmUgY29weSBvZiB0aGlzIHN1Ym1pc3Npb24gZm9yCnB1cnBvc2VzIG9mIHNlY3VyaXR5LCBiYWNrLXVwIGFuZCBwcmVzZXJ2YXRpb24uCgpZb3UgcmVwcmVzZW50IHRoYXQgdGhlIHN1Ym1pc3Npb24gaXMgeW91ciBvcmlnaW5hbCB3b3JrLCBhbmQgdGhhdCB5b3UgaGF2ZQp0aGUgcmlnaHQgdG8gZ3JhbnQgdGhlIHJpZ2h0cyBjb250YWluZWQgaW4gdGhpcyBsaWNlbnNlLiBZb3UgYWxzbyByZXByZXNlbnQKdGhhdCB5b3VyIHN1Ym1pc3Npb24gZG9lcyBub3QsIHRvIHRoZSBiZXN0IG9mIHlvdXIga25vd2xlZGdlLCBpbmZyaW5nZSB1cG9uCmFueW9uZSdzIGNvcHlyaWdodC4KCklmIHRoZSBzdWJtaXNzaW9uIGNvbnRhaW5zIG1hdGVyaWFsIGZvciB3aGljaCB5b3UgZG8gbm90IGhvbGQgY29weXJpZ2h0LAp5b3UgcmVwcmVzZW50IHRoYXQgeW91IGhhdmUgb2J0YWluZWQgdGhlIHVucmVzdHJpY3RlZCBwZXJtaXNzaW9uIG9mIHRoZQpjb3B5cmlnaHQgb3duZXIgdG8gZ3JhbnQgRFNVIHRoZSByaWdodHMgcmVxdWlyZWQgYnkgdGhpcyBsaWNlbnNlLCBhbmQgdGhhdApzdWNoIHRoaXJkLXBhcnR5IG93bmVkIG1hdGVyaWFsIGlzIGNsZWFybHkgaWRlbnRpZmllZCBhbmQgYWNrbm93bGVkZ2VkCndpdGhpbiB0aGUgdGV4dCBvciBjb250ZW50IG9mIHRoZSBzdWJtaXNzaW9uLgoKSUYgVEhFIFNVQk1JU1NJT04gSVMgQkFTRUQgVVBPTiBXT1JLIFRIQVQgSEFTIEJFRU4gU1BPTlNPUkVEIE9SIFNVUFBPUlRFRApCWSBBTiBBR0VOQ1kgT1IgT1JHQU5JWkFUSU9OIE9USEVSIFRIQU4gRFNVLCBZT1UgUkVQUkVTRU5UIFRIQVQgWU9VIEhBVkUKRlVMRklMTEVEIEFOWSBSSUdIVCBPRiBSRVZJRVcgT1IgT1RIRVIgT0JMSUdBVElPTlMgUkVRVUlSRUQgQlkgU1VDSApDT05UUkFDVCBPUiBBR1JFRU1FTlQuCgpEU1Ugd2lsbCBjbGVhcmx5IGlkZW50aWZ5IHlvdXIgbmFtZShzKSBhcyB0aGUgYXV0aG9yKHMpIG9yIG93bmVyKHMpIG9mIHRoZQpzdWJtaXNzaW9uLCBhbmQgd2lsbCBub3QgbWFrZSBhbnkgYWx0ZXJhdGlvbiwgb3RoZXIgdGhhbiBhcyBhbGxvd2VkIGJ5IHRoaXMKbGljZW5zZSwgdG8geW91ciBzdWJtaXNzaW9uLgo=Repositório InstitucionalPUBhttps://www.locus.ufv.br/oai/requestfabiojreis@ufv.bropendoar:21452023-05-17T13:58:30LOCUS Repositório Institucional da UFV - Universidade Federal de Viçosa (UFV)false
dc.title.en.fl_str_mv Genetic variability of tambaqui broodstocks in the Brazilian state of Pará
title Genetic variability of tambaqui broodstocks in the Brazilian state of Pará
spellingShingle Genetic variability of tambaqui broodstocks in the Brazilian state of Pará
Ferreira, Leandro de Araújo
Colossoma macropomum
fish
genetic diversity
hatcheries
title_short Genetic variability of tambaqui broodstocks in the Brazilian state of Pará
title_full Genetic variability of tambaqui broodstocks in the Brazilian state of Pará
title_fullStr Genetic variability of tambaqui broodstocks in the Brazilian state of Pará
title_full_unstemmed Genetic variability of tambaqui broodstocks in the Brazilian state of Pará
title_sort Genetic variability of tambaqui broodstocks in the Brazilian state of Pará
author Ferreira, Leandro de Araújo
author_facet Ferreira, Leandro de Araújo
Fazzi-Gomes, Paola Fabiana
Guerreiro, Sávio
Rodrigues, Marília Danyelle Nunes
Ribeiro-dos-Santos, Ândrea Kely
Santos, Sidney
Hamoy, Igor
author_role author
author2 Fazzi-Gomes, Paola Fabiana
Guerreiro, Sávio
Rodrigues, Marília Danyelle Nunes
Ribeiro-dos-Santos, Ândrea Kely
Santos, Sidney
Hamoy, Igor
author2_role author
author
author
author
author
author
dc.contributor.author.fl_str_mv Ferreira, Leandro de Araújo
Fazzi-Gomes, Paola Fabiana
Guerreiro, Sávio
Rodrigues, Marília Danyelle Nunes
Ribeiro-dos-Santos, Ândrea Kely
Santos, Sidney
Hamoy, Igor
dc.subject.eng.fl_str_mv Colossoma macropomum
fish
genetic diversity
hatcheries
topic Colossoma macropomum
fish
genetic diversity
hatcheries
description The present study evaluated the genetic variability of the broodstocks of tambaqui hatcheries in the Brazilian state of Pará. Samples were obtained from the caudal fin of 110 broodstocks from one hatchery in each of four municipalities (Santarém, Peixe-Boi, Breu-Branco, and Ulianópolis), representing all the individuals of each hatchery stock. The samples were genotyped using the multiplex system microsatellite markers. Data were used to calculate observed and expected heterozygosity, number of alleles per locus, and allelic richness. The effective population size and inbreeding coefficient were also calculated. The genetic differentiation between populations was evaluated by using FST, and population structuring by the most likely number of genetically homogenous populations and Unweighted Pair Group Method (UPGMA); the arithmetic means were based on Nei’s. The indices indicated a loss of genetic variability in the broodstocks from Ulianópolis, Peixe-Boi, and Breu-Branco in comparison with wild tambaqui populations, although this was not apparent in the Santarém stock. A moderate level of genetic differentiation was found among the tambaqui broodstocks based on the FST estimates, which were reinforced by the structuring found in the Bayesian analysis and UPGMA. This reflects the domestication process, given that no such structuring is found in natural tambaqui populations. This moderate genetic differentiation associated with the loss of genetic variability found in the four tambaqui broodstocks from the state of Pará provides important insights for the development of future programs of genetic improvement, as well as the conservation of the genetic diversity of these stocks
publishDate 2019
dc.date.issued.fl_str_mv 2019-06-06
dc.date.accessioned.fl_str_mv 2023-05-17T13:58:29Z
dc.date.available.fl_str_mv 2023-05-17T13:58:29Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
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status_str publishedVersion
dc.identifier.citation.fl_str_mv Ferreira, L. A.; Fazzi-Gomes, P. F.; Guerreiro, S.; Rodrigues, M. D. N.; Ribeiro-dos-Santos, A. K.; Santos, S. and Hamoy, I. 2019. Genetic variability of tambaqui broodstocks in the Brazilian state of Pará. Revista Brasileira de Zootecnia 48:e20180106
dc.identifier.uri.fl_str_mv https://locus.ufv.br//handle/123456789/30897
dc.identifier.issn.none.fl_str_mv 1806-9290
dc.identifier.doi.pt-BR.fl_str_mv https://doi.org/10.1590/rbz4820180106
identifier_str_mv Ferreira, L. A.; Fazzi-Gomes, P. F.; Guerreiro, S.; Rodrigues, M. D. N.; Ribeiro-dos-Santos, A. K.; Santos, S. and Hamoy, I. 2019. Genetic variability of tambaqui broodstocks in the Brazilian state of Pará. Revista Brasileira de Zootecnia 48:e20180106
1806-9290
url https://locus.ufv.br//handle/123456789/30897
https://doi.org/10.1590/rbz4820180106
dc.language.iso.fl_str_mv eng
language eng
dc.relation.ispartofseries.pt-BR.fl_str_mv R. Bras. Zootec., 48:e20180106, 2019
dc.rights.driver.fl_str_mv Creative Commons Attribution License
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rights_invalid_str_mv Creative Commons Attribution License
eu_rights_str_mv openAccess
dc.publisher.none.fl_str_mv Brazilian Journal of Animal Science
publisher.none.fl_str_mv Brazilian Journal of Animal Science
dc.source.none.fl_str_mv reponame:LOCUS Repositório Institucional da UFV
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