Genetic diversity between and within full-sib families of Jatropha using ISSR markers
Autor(a) principal: | |
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Data de Publicação: | 2018 |
Outros Autores: | , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | LOCUS Repositório Institucional da UFV |
Texto Completo: | https://doi.org/10.1016/j.indcrop.2018.08.066 http://www.locus.ufv.br/handle/123456789/22208 |
Resumo: | The aim of this study was to evaluate the genetic diversity between and within of six full-sib families of Jatropha through ISSR molecular markers. Six genitors were selected based on oil and seed potentiality. A set of 20 ISSR markers was used. The genetic distances were estimated based on Jaccard similarity coefficient and the descriptive statistics of populations for estimation of genetic parameters were also performed. A total of 177 polymorphic bands were obtained. The polymorphism within full-sib families ranged from 22 to 51.6% for families 2 and 5, respectively. The similarity analysis between families presented an average distance of 61%. The effective number of alleles varied from 0.56 to 1.86. The lowest value for Nei’s gene diversity index was 0.34 and the largest was 0.46 and the Shannon information index ranged from 0.51 to 0.65. The genetic variability analysis, by ISSR molecular markers showed low genetic dissimilarity within of full-sib families of Jatropha. However, the evaluation between the full-sib families demonstrated that the accessions belonging to family 1 are the most divergent, and should be considered in future artificial hybridations strategies. |
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Duarte, Anunciene BarbosaGomes, Wellington SilvaNietsche, SílviaPereira, Marlon Cristian ToledoRodrigues, Bruno Rafael AlvesFerreira, Lucas BorgesPaixão, Pedro Thiago Medeiros2018-10-09T17:42:36Z2018-10-09T17:42:36Z2018-11-1509266690https://doi.org/10.1016/j.indcrop.2018.08.066http://www.locus.ufv.br/handle/123456789/22208The aim of this study was to evaluate the genetic diversity between and within of six full-sib families of Jatropha through ISSR molecular markers. Six genitors were selected based on oil and seed potentiality. A set of 20 ISSR markers was used. The genetic distances were estimated based on Jaccard similarity coefficient and the descriptive statistics of populations for estimation of genetic parameters were also performed. A total of 177 polymorphic bands were obtained. The polymorphism within full-sib families ranged from 22 to 51.6% for families 2 and 5, respectively. The similarity analysis between families presented an average distance of 61%. The effective number of alleles varied from 0.56 to 1.86. The lowest value for Nei’s gene diversity index was 0.34 and the largest was 0.46 and the Shannon information index ranged from 0.51 to 0.65. The genetic variability analysis, by ISSR molecular markers showed low genetic dissimilarity within of full-sib families of Jatropha. However, the evaluation between the full-sib families demonstrated that the accessions belonging to family 1 are the most divergent, and should be considered in future artificial hybridations strategies.engIndustrial Crops and Productsv. 124, p. 899- 905, nov. 2018Elsevier B.V.info:eu-repo/semantics/openAccessJatropha curcasOleaginousGenetic variabilityInter simple sequence repeatGenetic diversity between and within full-sib families of Jatropha using ISSR markersinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfreponame:LOCUS Repositório Institucional da UFVinstname:Universidade Federal de Viçosa (UFV)instacron:UFVORIGINALartigo.pdfartigo.pdftexto completoapplication/pdf830618https://locus.ufv.br//bitstream/123456789/22208/1/artigo.pdf29577edd70c17ab147421c7d5ab30f00MD51LICENSElicense.txtlicense.txttext/plain; charset=utf-81748https://locus.ufv.br//bitstream/123456789/22208/2/license.txt8a4605be74aa9ea9d79846c1fba20a33MD52123456789/222082018-10-09 14:46:02.503oai:locus.ufv.br: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Repositório InstitucionalPUBhttps://www.locus.ufv.br/oai/requestfabiojreis@ufv.bropendoar:21452018-10-09T17:46:02LOCUS Repositório Institucional da UFV - Universidade Federal de Viçosa (UFV)false |
dc.title.en.fl_str_mv |
Genetic diversity between and within full-sib families of Jatropha using ISSR markers |
title |
Genetic diversity between and within full-sib families of Jatropha using ISSR markers |
spellingShingle |
Genetic diversity between and within full-sib families of Jatropha using ISSR markers Duarte, Anunciene Barbosa Jatropha curcas Oleaginous Genetic variability Inter simple sequence repeat |
title_short |
Genetic diversity between and within full-sib families of Jatropha using ISSR markers |
title_full |
Genetic diversity between and within full-sib families of Jatropha using ISSR markers |
title_fullStr |
Genetic diversity between and within full-sib families of Jatropha using ISSR markers |
title_full_unstemmed |
Genetic diversity between and within full-sib families of Jatropha using ISSR markers |
title_sort |
Genetic diversity between and within full-sib families of Jatropha using ISSR markers |
author |
Duarte, Anunciene Barbosa |
author_facet |
Duarte, Anunciene Barbosa Gomes, Wellington Silva Nietsche, Sílvia Pereira, Marlon Cristian Toledo Rodrigues, Bruno Rafael Alves Ferreira, Lucas Borges Paixão, Pedro Thiago Medeiros |
author_role |
author |
author2 |
Gomes, Wellington Silva Nietsche, Sílvia Pereira, Marlon Cristian Toledo Rodrigues, Bruno Rafael Alves Ferreira, Lucas Borges Paixão, Pedro Thiago Medeiros |
author2_role |
author author author author author author |
dc.contributor.author.fl_str_mv |
Duarte, Anunciene Barbosa Gomes, Wellington Silva Nietsche, Sílvia Pereira, Marlon Cristian Toledo Rodrigues, Bruno Rafael Alves Ferreira, Lucas Borges Paixão, Pedro Thiago Medeiros |
dc.subject.pt-BR.fl_str_mv |
Jatropha curcas Oleaginous Genetic variability Inter simple sequence repeat |
topic |
Jatropha curcas Oleaginous Genetic variability Inter simple sequence repeat |
description |
The aim of this study was to evaluate the genetic diversity between and within of six full-sib families of Jatropha through ISSR molecular markers. Six genitors were selected based on oil and seed potentiality. A set of 20 ISSR markers was used. The genetic distances were estimated based on Jaccard similarity coefficient and the descriptive statistics of populations for estimation of genetic parameters were also performed. A total of 177 polymorphic bands were obtained. The polymorphism within full-sib families ranged from 22 to 51.6% for families 2 and 5, respectively. The similarity analysis between families presented an average distance of 61%. The effective number of alleles varied from 0.56 to 1.86. The lowest value for Nei’s gene diversity index was 0.34 and the largest was 0.46 and the Shannon information index ranged from 0.51 to 0.65. The genetic variability analysis, by ISSR molecular markers showed low genetic dissimilarity within of full-sib families of Jatropha. However, the evaluation between the full-sib families demonstrated that the accessions belonging to family 1 are the most divergent, and should be considered in future artificial hybridations strategies. |
publishDate |
2018 |
dc.date.accessioned.fl_str_mv |
2018-10-09T17:42:36Z |
dc.date.available.fl_str_mv |
2018-10-09T17:42:36Z |
dc.date.issued.fl_str_mv |
2018-11-15 |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
https://doi.org/10.1016/j.indcrop.2018.08.066 http://www.locus.ufv.br/handle/123456789/22208 |
dc.identifier.issn.none.fl_str_mv |
09266690 |
identifier_str_mv |
09266690 |
url |
https://doi.org/10.1016/j.indcrop.2018.08.066 http://www.locus.ufv.br/handle/123456789/22208 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.ispartofseries.pt-BR.fl_str_mv |
v. 124, p. 899- 905, nov. 2018 |
dc.rights.driver.fl_str_mv |
Elsevier B.V. info:eu-repo/semantics/openAccess |
rights_invalid_str_mv |
Elsevier B.V. |
eu_rights_str_mv |
openAccess |
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application/pdf |
dc.publisher.none.fl_str_mv |
Industrial Crops and Products |
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Industrial Crops and Products |
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reponame:LOCUS Repositório Institucional da UFV instname:Universidade Federal de Viçosa (UFV) instacron:UFV |
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UFV |
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LOCUS Repositório Institucional da UFV |
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LOCUS Repositório Institucional da UFV |
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