Genetic diversity between and within full-sib families of Jatropha using ISSR markers

Detalhes bibliográficos
Autor(a) principal: Duarte, Anunciene Barbosa
Data de Publicação: 2018
Outros Autores: Gomes, Wellington Silva, Nietsche, Sílvia, Pereira, Marlon Cristian Toledo, Rodrigues, Bruno Rafael Alves, Ferreira, Lucas Borges, Paixão, Pedro Thiago Medeiros
Tipo de documento: Artigo
Idioma: eng
Título da fonte: LOCUS Repositório Institucional da UFV
Texto Completo: https://doi.org/10.1016/j.indcrop.2018.08.066
http://www.locus.ufv.br/handle/123456789/22208
Resumo: The aim of this study was to evaluate the genetic diversity between and within of six full-sib families of Jatropha through ISSR molecular markers. Six genitors were selected based on oil and seed potentiality. A set of 20 ISSR markers was used. The genetic distances were estimated based on Jaccard similarity coefficient and the descriptive statistics of populations for estimation of genetic parameters were also performed. A total of 177 polymorphic bands were obtained. The polymorphism within full-sib families ranged from 22 to 51.6% for families 2 and 5, respectively. The similarity analysis between families presented an average distance of 61%. The effective number of alleles varied from 0.56 to 1.86. The lowest value for Nei’s gene diversity index was 0.34 and the largest was 0.46 and the Shannon information index ranged from 0.51 to 0.65. The genetic variability analysis, by ISSR molecular markers showed low genetic dissimilarity within of full-sib families of Jatropha. However, the evaluation between the full-sib families demonstrated that the accessions belonging to family 1 are the most divergent, and should be considered in future artificial hybridations strategies.
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spelling Duarte, Anunciene BarbosaGomes, Wellington SilvaNietsche, SílviaPereira, Marlon Cristian ToledoRodrigues, Bruno Rafael AlvesFerreira, Lucas BorgesPaixão, Pedro Thiago Medeiros2018-10-09T17:42:36Z2018-10-09T17:42:36Z2018-11-1509266690https://doi.org/10.1016/j.indcrop.2018.08.066http://www.locus.ufv.br/handle/123456789/22208The aim of this study was to evaluate the genetic diversity between and within of six full-sib families of Jatropha through ISSR molecular markers. Six genitors were selected based on oil and seed potentiality. A set of 20 ISSR markers was used. The genetic distances were estimated based on Jaccard similarity coefficient and the descriptive statistics of populations for estimation of genetic parameters were also performed. A total of 177 polymorphic bands were obtained. The polymorphism within full-sib families ranged from 22 to 51.6% for families 2 and 5, respectively. The similarity analysis between families presented an average distance of 61%. The effective number of alleles varied from 0.56 to 1.86. The lowest value for Nei’s gene diversity index was 0.34 and the largest was 0.46 and the Shannon information index ranged from 0.51 to 0.65. The genetic variability analysis, by ISSR molecular markers showed low genetic dissimilarity within of full-sib families of Jatropha. However, the evaluation between the full-sib families demonstrated that the accessions belonging to family 1 are the most divergent, and should be considered in future artificial hybridations strategies.engIndustrial Crops and Productsv. 124, p. 899- 905, nov. 2018Elsevier B.V.info:eu-repo/semantics/openAccessJatropha curcasOleaginousGenetic variabilityInter simple sequence repeatGenetic diversity between and within full-sib families of Jatropha using ISSR markersinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfreponame:LOCUS Repositório Institucional da UFVinstname:Universidade Federal de Viçosa (UFV)instacron:UFVORIGINALartigo.pdfartigo.pdftexto completoapplication/pdf830618https://locus.ufv.br//bitstream/123456789/22208/1/artigo.pdf29577edd70c17ab147421c7d5ab30f00MD51LICENSElicense.txtlicense.txttext/plain; charset=utf-81748https://locus.ufv.br//bitstream/123456789/22208/2/license.txt8a4605be74aa9ea9d79846c1fba20a33MD52123456789/222082018-10-09 14:46:02.503oai:locus.ufv.br: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Repositório InstitucionalPUBhttps://www.locus.ufv.br/oai/requestfabiojreis@ufv.bropendoar:21452018-10-09T17:46:02LOCUS Repositório Institucional da UFV - Universidade Federal de Viçosa (UFV)false
dc.title.en.fl_str_mv Genetic diversity between and within full-sib families of Jatropha using ISSR markers
title Genetic diversity between and within full-sib families of Jatropha using ISSR markers
spellingShingle Genetic diversity between and within full-sib families of Jatropha using ISSR markers
Duarte, Anunciene Barbosa
Jatropha curcas
Oleaginous
Genetic variability
Inter simple sequence repeat
title_short Genetic diversity between and within full-sib families of Jatropha using ISSR markers
title_full Genetic diversity between and within full-sib families of Jatropha using ISSR markers
title_fullStr Genetic diversity between and within full-sib families of Jatropha using ISSR markers
title_full_unstemmed Genetic diversity between and within full-sib families of Jatropha using ISSR markers
title_sort Genetic diversity between and within full-sib families of Jatropha using ISSR markers
author Duarte, Anunciene Barbosa
author_facet Duarte, Anunciene Barbosa
Gomes, Wellington Silva
Nietsche, Sílvia
Pereira, Marlon Cristian Toledo
Rodrigues, Bruno Rafael Alves
Ferreira, Lucas Borges
Paixão, Pedro Thiago Medeiros
author_role author
author2 Gomes, Wellington Silva
Nietsche, Sílvia
Pereira, Marlon Cristian Toledo
Rodrigues, Bruno Rafael Alves
Ferreira, Lucas Borges
Paixão, Pedro Thiago Medeiros
author2_role author
author
author
author
author
author
dc.contributor.author.fl_str_mv Duarte, Anunciene Barbosa
Gomes, Wellington Silva
Nietsche, Sílvia
Pereira, Marlon Cristian Toledo
Rodrigues, Bruno Rafael Alves
Ferreira, Lucas Borges
Paixão, Pedro Thiago Medeiros
dc.subject.pt-BR.fl_str_mv Jatropha curcas
Oleaginous
Genetic variability
Inter simple sequence repeat
topic Jatropha curcas
Oleaginous
Genetic variability
Inter simple sequence repeat
description The aim of this study was to evaluate the genetic diversity between and within of six full-sib families of Jatropha through ISSR molecular markers. Six genitors were selected based on oil and seed potentiality. A set of 20 ISSR markers was used. The genetic distances were estimated based on Jaccard similarity coefficient and the descriptive statistics of populations for estimation of genetic parameters were also performed. A total of 177 polymorphic bands were obtained. The polymorphism within full-sib families ranged from 22 to 51.6% for families 2 and 5, respectively. The similarity analysis between families presented an average distance of 61%. The effective number of alleles varied from 0.56 to 1.86. The lowest value for Nei’s gene diversity index was 0.34 and the largest was 0.46 and the Shannon information index ranged from 0.51 to 0.65. The genetic variability analysis, by ISSR molecular markers showed low genetic dissimilarity within of full-sib families of Jatropha. However, the evaluation between the full-sib families demonstrated that the accessions belonging to family 1 are the most divergent, and should be considered in future artificial hybridations strategies.
publishDate 2018
dc.date.accessioned.fl_str_mv 2018-10-09T17:42:36Z
dc.date.available.fl_str_mv 2018-10-09T17:42:36Z
dc.date.issued.fl_str_mv 2018-11-15
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv https://doi.org/10.1016/j.indcrop.2018.08.066
http://www.locus.ufv.br/handle/123456789/22208
dc.identifier.issn.none.fl_str_mv 09266690
identifier_str_mv 09266690
url https://doi.org/10.1016/j.indcrop.2018.08.066
http://www.locus.ufv.br/handle/123456789/22208
dc.language.iso.fl_str_mv eng
language eng
dc.relation.ispartofseries.pt-BR.fl_str_mv v. 124, p. 899- 905, nov. 2018
dc.rights.driver.fl_str_mv Elsevier B.V.
info:eu-repo/semantics/openAccess
rights_invalid_str_mv Elsevier B.V.
eu_rights_str_mv openAccess
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dc.publisher.none.fl_str_mv Industrial Crops and Products
publisher.none.fl_str_mv Industrial Crops and Products
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