Transcriptional patterns of Coffea arabica L. nitrate reductase, glutamine and asparagine synthetase genes are modulated under nitrogen suppression and coffee leaf rust

Detalhes bibliográficos
Autor(a) principal: Baba, Viviane Yumi
Data de Publicação: 2020
Outros Autores: Braghini, Masako Toma, Dos Santos, Tiago Benedito, De Carvalho, Kenia, Soares, João Danillo Moura, Ivamoto-Suzuki, Suzana Tiemi [UNESP], Maluf, Mirian P., Padilha, Lilian, Paccola-Meirelles, Luzia D., Pereira, Luiz Filipe, Domingues, Douglas S. [UNESP]
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.7717/peerj.8320
http://hdl.handle.net/11449/198434
Resumo: This study evaluated the transcriptional profile of genes related to nitrogen (N) assimilation in coffee plants susceptible and resistant to rust fungi under N sufficiency and N suppression. For this purpose, we inoculated young coffee leaves with Hemileia vastatrix uredospores and collected them at 0, 12, 24 and 48 hours post-inoculation (HPI) to evaluate the relative expressions of genes encoding cytosolic glutamine synthetase (CaGS1), plastid glutamine synthetase (CaGS2), nitrate reductase (CaNR), and asparagine synthetase (CaAS). The genes exhibited distinct patterns of transcriptional modulation for the different genotypes and N nutritional regimes. The resistant genotype (I59) presented high levels of transcription in response to pathogen inoculation for CaNR and CaGS1 genes, evaluated under N sufficiency in the initial moments of infection (12 HPI). The gene CaGS1 also showed a peak at 48 HPI. The susceptible genotype (CV99) showed increased transcript rates of CaNR at 12 and 24 HPI in response to rust inoculation. The transcriptional patterns observed for CV99, under N suppression, were high levels for CaAS and CaGS2 at all post-inoculation times in response to coffee leaf rust disease. In addition, CaGS1 was up-regulated at 48 HPI for CV99. Cultivar I59 showed high transcript levels at 12 HPI for CaAS and peaks at 24 and 48 HPI for CaGS2 in inoculated samples. Consequently, total chlorophyl concentration was influenced by N suppression and by rust infection. Regarding enzyme activities in vitro for glutamine synthetase and CaNR, there was an increase in infected coffee leaves (I59) and under N sufficiency. Moreover, CV99 was modulated in both N nutritional regimes for GS activity in response to rust. Our results indicate that N transport genes trigger a differential modulation between genotypes through the action of rust disease.
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spelling Transcriptional patterns of Coffea arabica L. nitrate reductase, glutamine and asparagine synthetase genes are modulated under nitrogen suppression and coffee leaf rustGene expressionGenotypic responseHemileia vastatrixMineral nutritionN assimilationRT-qPCRThis study evaluated the transcriptional profile of genes related to nitrogen (N) assimilation in coffee plants susceptible and resistant to rust fungi under N sufficiency and N suppression. For this purpose, we inoculated young coffee leaves with Hemileia vastatrix uredospores and collected them at 0, 12, 24 and 48 hours post-inoculation (HPI) to evaluate the relative expressions of genes encoding cytosolic glutamine synthetase (CaGS1), plastid glutamine synthetase (CaGS2), nitrate reductase (CaNR), and asparagine synthetase (CaAS). The genes exhibited distinct patterns of transcriptional modulation for the different genotypes and N nutritional regimes. The resistant genotype (I59) presented high levels of transcription in response to pathogen inoculation for CaNR and CaGS1 genes, evaluated under N sufficiency in the initial moments of infection (12 HPI). The gene CaGS1 also showed a peak at 48 HPI. The susceptible genotype (CV99) showed increased transcript rates of CaNR at 12 and 24 HPI in response to rust inoculation. The transcriptional patterns observed for CV99, under N suppression, were high levels for CaAS and CaGS2 at all post-inoculation times in response to coffee leaf rust disease. In addition, CaGS1 was up-regulated at 48 HPI for CV99. Cultivar I59 showed high transcript levels at 12 HPI for CaAS and peaks at 24 and 48 HPI for CaGS2 in inoculated samples. Consequently, total chlorophyl concentration was influenced by N suppression and by rust infection. Regarding enzyme activities in vitro for glutamine synthetase and CaNR, there was an increase in infected coffee leaves (I59) and under N sufficiency. Moreover, CV99 was modulated in both N nutritional regimes for GS activity in response to rust. Our results indicate that N transport genes trigger a differential modulation between genotypes through the action of rust disease.Department of Agronomy Universidade Estadual de LondrinaPlant Biotechnology Laboratory Instituto Agronômico Do ParanáCentro de Analise e Pesquisa Tecnologica Do Agronegocio Do Cafe 'Alcides Carvalho' Instituto Agronômico de CampinasPrograma de Pós-Graduação em Agronomia Universidade Do Oeste PaulistaPlant Biotechnology LaboratoryDepartment of Botany Instituto de Biociências São Paulo State University UNESPPlant BreedingDepartment of Agronomy Universidade ParanaenseDepartment of Botany Instituto de Biociências São Paulo State University UNESPUniversidade Estadual de Londrina (UEL)Instituto Agronômico Do ParanáInstituto Agronômico de CampinasUniversidade Do Oeste PaulistaEmpresa Brasileira de Pesquisa Agropecuária (EMBRAPA)Universidade Estadual Paulista (Unesp)Universidade ParanaenseBaba, Viviane YumiBraghini, Masako TomaDos Santos, Tiago BeneditoDe Carvalho, KeniaSoares, João Danillo MouraIvamoto-Suzuki, Suzana Tiemi [UNESP]Maluf, Mirian P.Padilha, LilianPaccola-Meirelles, Luzia D.Pereira, Luiz FilipeDomingues, Douglas S. [UNESP]2020-12-12T01:12:49Z2020-12-12T01:12:49Z2020-01-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttp://dx.doi.org/10.7717/peerj.8320PeerJ, v. 2020, n. 1, 2020.2167-8359http://hdl.handle.net/11449/19843410.7717/peerj.83202-s2.0-85078313772Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengPeerJinfo:eu-repo/semantics/openAccess2021-10-23T11:43:39Zoai:repositorio.unesp.br:11449/198434Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462021-10-23T11:43:39Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv Transcriptional patterns of Coffea arabica L. nitrate reductase, glutamine and asparagine synthetase genes are modulated under nitrogen suppression and coffee leaf rust
title Transcriptional patterns of Coffea arabica L. nitrate reductase, glutamine and asparagine synthetase genes are modulated under nitrogen suppression and coffee leaf rust
spellingShingle Transcriptional patterns of Coffea arabica L. nitrate reductase, glutamine and asparagine synthetase genes are modulated under nitrogen suppression and coffee leaf rust
Baba, Viviane Yumi
Gene expression
Genotypic response
Hemileia vastatrix
Mineral nutrition
N assimilation
RT-qPCR
title_short Transcriptional patterns of Coffea arabica L. nitrate reductase, glutamine and asparagine synthetase genes are modulated under nitrogen suppression and coffee leaf rust
title_full Transcriptional patterns of Coffea arabica L. nitrate reductase, glutamine and asparagine synthetase genes are modulated under nitrogen suppression and coffee leaf rust
title_fullStr Transcriptional patterns of Coffea arabica L. nitrate reductase, glutamine and asparagine synthetase genes are modulated under nitrogen suppression and coffee leaf rust
title_full_unstemmed Transcriptional patterns of Coffea arabica L. nitrate reductase, glutamine and asparagine synthetase genes are modulated under nitrogen suppression and coffee leaf rust
title_sort Transcriptional patterns of Coffea arabica L. nitrate reductase, glutamine and asparagine synthetase genes are modulated under nitrogen suppression and coffee leaf rust
author Baba, Viviane Yumi
author_facet Baba, Viviane Yumi
Braghini, Masako Toma
Dos Santos, Tiago Benedito
De Carvalho, Kenia
Soares, João Danillo Moura
Ivamoto-Suzuki, Suzana Tiemi [UNESP]
Maluf, Mirian P.
Padilha, Lilian
Paccola-Meirelles, Luzia D.
Pereira, Luiz Filipe
Domingues, Douglas S. [UNESP]
author_role author
author2 Braghini, Masako Toma
Dos Santos, Tiago Benedito
De Carvalho, Kenia
Soares, João Danillo Moura
Ivamoto-Suzuki, Suzana Tiemi [UNESP]
Maluf, Mirian P.
Padilha, Lilian
Paccola-Meirelles, Luzia D.
Pereira, Luiz Filipe
Domingues, Douglas S. [UNESP]
author2_role author
author
author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Universidade Estadual de Londrina (UEL)
Instituto Agronômico Do Paraná
Instituto Agronômico de Campinas
Universidade Do Oeste Paulista
Empresa Brasileira de Pesquisa Agropecuária (EMBRAPA)
Universidade Estadual Paulista (Unesp)
Universidade Paranaense
dc.contributor.author.fl_str_mv Baba, Viviane Yumi
Braghini, Masako Toma
Dos Santos, Tiago Benedito
De Carvalho, Kenia
Soares, João Danillo Moura
Ivamoto-Suzuki, Suzana Tiemi [UNESP]
Maluf, Mirian P.
Padilha, Lilian
Paccola-Meirelles, Luzia D.
Pereira, Luiz Filipe
Domingues, Douglas S. [UNESP]
dc.subject.por.fl_str_mv Gene expression
Genotypic response
Hemileia vastatrix
Mineral nutrition
N assimilation
RT-qPCR
topic Gene expression
Genotypic response
Hemileia vastatrix
Mineral nutrition
N assimilation
RT-qPCR
description This study evaluated the transcriptional profile of genes related to nitrogen (N) assimilation in coffee plants susceptible and resistant to rust fungi under N sufficiency and N suppression. For this purpose, we inoculated young coffee leaves with Hemileia vastatrix uredospores and collected them at 0, 12, 24 and 48 hours post-inoculation (HPI) to evaluate the relative expressions of genes encoding cytosolic glutamine synthetase (CaGS1), plastid glutamine synthetase (CaGS2), nitrate reductase (CaNR), and asparagine synthetase (CaAS). The genes exhibited distinct patterns of transcriptional modulation for the different genotypes and N nutritional regimes. The resistant genotype (I59) presented high levels of transcription in response to pathogen inoculation for CaNR and CaGS1 genes, evaluated under N sufficiency in the initial moments of infection (12 HPI). The gene CaGS1 also showed a peak at 48 HPI. The susceptible genotype (CV99) showed increased transcript rates of CaNR at 12 and 24 HPI in response to rust inoculation. The transcriptional patterns observed for CV99, under N suppression, were high levels for CaAS and CaGS2 at all post-inoculation times in response to coffee leaf rust disease. In addition, CaGS1 was up-regulated at 48 HPI for CV99. Cultivar I59 showed high transcript levels at 12 HPI for CaAS and peaks at 24 and 48 HPI for CaGS2 in inoculated samples. Consequently, total chlorophyl concentration was influenced by N suppression and by rust infection. Regarding enzyme activities in vitro for glutamine synthetase and CaNR, there was an increase in infected coffee leaves (I59) and under N sufficiency. Moreover, CV99 was modulated in both N nutritional regimes for GS activity in response to rust. Our results indicate that N transport genes trigger a differential modulation between genotypes through the action of rust disease.
publishDate 2020
dc.date.none.fl_str_mv 2020-12-12T01:12:49Z
2020-12-12T01:12:49Z
2020-01-01
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.7717/peerj.8320
PeerJ, v. 2020, n. 1, 2020.
2167-8359
http://hdl.handle.net/11449/198434
10.7717/peerj.8320
2-s2.0-85078313772
url http://dx.doi.org/10.7717/peerj.8320
http://hdl.handle.net/11449/198434
identifier_str_mv PeerJ, v. 2020, n. 1, 2020.
2167-8359
10.7717/peerj.8320
2-s2.0-85078313772
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv PeerJ
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.source.none.fl_str_mv Scopus
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
repository.mail.fl_str_mv
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