Structure and genetic variability of the oceanic whitetip ahark, carcharhinus longimanus, determined using mitochondrial DNA

Detalhes bibliográficos
Autor(a) principal: Camargo, Sâmia M. [UNESP]
Data de Publicação: 2016
Outros Autores: Coelho, Rui, Chapman, Demian, Howey-Jordan, Lucy, Brooks, Edward J., Fernando, Daniel, Mendes, Natalia J. [UNESP], Hazin, Fabio H. V., Oliveira, Claudio [UNESP], Santos, Miguel N., Foresti, Fausto [UNESP], Mendonça, Fernando F.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.1371/journal.pone.0155623
http://hdl.handle.net/11449/172988
Resumo: Information regarding population structure and genetic connectivity is an important contribution when establishing conservation strategies to manage threatened species. The oceanic whitetip shark, Carcharhinus longimanus, is a highly migratory, large-bodied, pelagic shark listed by the IUCN (International Union for Conservation of Nature) Red List as vulnerable throughout its range and critically endangered in the western north Atlantic. In 2014, the species was protected globally under Appendix II of CITES (Convention on International Trade in Endangered Species), limiting and regulating trade. This study used partial sequences of mitochondrial DNA (mtDNA) control region to determine the population genetic structure of oceanic whitetip sharks across the Atlantic and Indian Oceans. 724 base pairs were obtained from 215 individuals that identifed nine polymorphic sites and defined 12 distinct haplotypes. Total nucleotide diversity (τ) was 0.0013 and haplotype diversity (h) was 0.5953. The Analysis of Molecular Variance (AMOVA) evidenced moderate levels of population structure (ØST = 0.1039) with restricted gene flow between the western and eastern Atlantic Ocean, and a strong relationship between the latter region and the Indian Ocean. Even though the oceanic whitetip is a highly migratory animal the results presented here show that their genetic variability is slightly below average of other pelagic sharks. Additionally, this study recommends that at least two populations in the Atlantic Ocean should be considered distinct (eastern and western Atlantic) and conservation efforts should be focused in areas with the greatest genetic diversity by environmental managers.
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spelling Structure and genetic variability of the oceanic whitetip ahark, carcharhinus longimanus, determined using mitochondrial DNAInformation regarding population structure and genetic connectivity is an important contribution when establishing conservation strategies to manage threatened species. The oceanic whitetip shark, Carcharhinus longimanus, is a highly migratory, large-bodied, pelagic shark listed by the IUCN (International Union for Conservation of Nature) Red List as vulnerable throughout its range and critically endangered in the western north Atlantic. In 2014, the species was protected globally under Appendix II of CITES (Convention on International Trade in Endangered Species), limiting and regulating trade. This study used partial sequences of mitochondrial DNA (mtDNA) control region to determine the population genetic structure of oceanic whitetip sharks across the Atlantic and Indian Oceans. 724 base pairs were obtained from 215 individuals that identifed nine polymorphic sites and defined 12 distinct haplotypes. Total nucleotide diversity (τ) was 0.0013 and haplotype diversity (h) was 0.5953. The Analysis of Molecular Variance (AMOVA) evidenced moderate levels of population structure (ØST = 0.1039) with restricted gene flow between the western and eastern Atlantic Ocean, and a strong relationship between the latter region and the Indian Ocean. Even though the oceanic whitetip is a highly migratory animal the results presented here show that their genetic variability is slightly below average of other pelagic sharks. Additionally, this study recommends that at least two populations in the Atlantic Ocean should be considered distinct (eastern and western Atlantic) and conservation efforts should be focused in areas with the greatest genetic diversity by environmental managers.Laboratório de Biologia e Genética de Peixes Instituto de Biociências de Botucatu Universidade Estadual Paulista (UNESP)Instituto Português Do Mar e DaAtmosfera (IPMA)Centro de Ciências Do Mar (CCMAR) Universidade AlgarveSchool of Marine and Atmospheric Science Stony Brook UniversityMicrowave Telemetry Inc.Shark Research and Conservation Program Cape Eleuthera InstituteManta Trust Catemwood HouseDepartment of Biology and Environmental Science Linnaeus UniversityBlue ResourcesDepartamento de Pesca e Aquicultura Universidade Federal Rural de PernambucoLaboratório de Genética Pesqueira e Conservação Instituto Do Mar Universidade Federal de São Paulo (UNIFESP)Laboratório de Biologia e Genética de Peixes Instituto de Biociências de Botucatu Universidade Estadual Paulista (UNESP)Universidade Estadual Paulista (Unesp)Instituto Português Do Mar e DaAtmosfera (IPMA)Universidade AlgarveStony Brook UniversityInc.Cape Eleuthera InstituteCatemwood HouseLinnaeus UniversityBlue ResourcesUniversidade Federal Rural de PernambucoUniversidade Federal de São Paulo (UNIFESP)Camargo, Sâmia M. [UNESP]Coelho, RuiChapman, DemianHowey-Jordan, LucyBrooks, Edward J.Fernando, DanielMendes, Natalia J. [UNESP]Hazin, Fabio H. V.Oliveira, Claudio [UNESP]Santos, Miguel N.Foresti, Fausto [UNESP]Mendonça, Fernando F.2018-12-11T17:03:01Z2018-12-11T17:03:01Z2016-05-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://dx.doi.org/10.1371/journal.pone.0155623PLoS ONE, v. 11, n. 5, 2016.1932-6203http://hdl.handle.net/11449/17298810.1371/journal.pone.01556232-s2.0-849698445642-s2.0-84969844564.pdfScopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengPLoS ONE1,164info:eu-repo/semantics/openAccess2023-12-26T06:21:30Zoai:repositorio.unesp.br:11449/172988Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462023-12-26T06:21:30Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv Structure and genetic variability of the oceanic whitetip ahark, carcharhinus longimanus, determined using mitochondrial DNA
title Structure and genetic variability of the oceanic whitetip ahark, carcharhinus longimanus, determined using mitochondrial DNA
spellingShingle Structure and genetic variability of the oceanic whitetip ahark, carcharhinus longimanus, determined using mitochondrial DNA
Camargo, Sâmia M. [UNESP]
title_short Structure and genetic variability of the oceanic whitetip ahark, carcharhinus longimanus, determined using mitochondrial DNA
title_full Structure and genetic variability of the oceanic whitetip ahark, carcharhinus longimanus, determined using mitochondrial DNA
title_fullStr Structure and genetic variability of the oceanic whitetip ahark, carcharhinus longimanus, determined using mitochondrial DNA
title_full_unstemmed Structure and genetic variability of the oceanic whitetip ahark, carcharhinus longimanus, determined using mitochondrial DNA
title_sort Structure and genetic variability of the oceanic whitetip ahark, carcharhinus longimanus, determined using mitochondrial DNA
author Camargo, Sâmia M. [UNESP]
author_facet Camargo, Sâmia M. [UNESP]
Coelho, Rui
Chapman, Demian
Howey-Jordan, Lucy
Brooks, Edward J.
Fernando, Daniel
Mendes, Natalia J. [UNESP]
Hazin, Fabio H. V.
Oliveira, Claudio [UNESP]
Santos, Miguel N.
Foresti, Fausto [UNESP]
Mendonça, Fernando F.
author_role author
author2 Coelho, Rui
Chapman, Demian
Howey-Jordan, Lucy
Brooks, Edward J.
Fernando, Daniel
Mendes, Natalia J. [UNESP]
Hazin, Fabio H. V.
Oliveira, Claudio [UNESP]
Santos, Miguel N.
Foresti, Fausto [UNESP]
Mendonça, Fernando F.
author2_role author
author
author
author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Universidade Estadual Paulista (Unesp)
Instituto Português Do Mar e DaAtmosfera (IPMA)
Universidade Algarve
Stony Brook University
Inc.
Cape Eleuthera Institute
Catemwood House
Linnaeus University
Blue Resources
Universidade Federal Rural de Pernambuco
Universidade Federal de São Paulo (UNIFESP)
dc.contributor.author.fl_str_mv Camargo, Sâmia M. [UNESP]
Coelho, Rui
Chapman, Demian
Howey-Jordan, Lucy
Brooks, Edward J.
Fernando, Daniel
Mendes, Natalia J. [UNESP]
Hazin, Fabio H. V.
Oliveira, Claudio [UNESP]
Santos, Miguel N.
Foresti, Fausto [UNESP]
Mendonça, Fernando F.
description Information regarding population structure and genetic connectivity is an important contribution when establishing conservation strategies to manage threatened species. The oceanic whitetip shark, Carcharhinus longimanus, is a highly migratory, large-bodied, pelagic shark listed by the IUCN (International Union for Conservation of Nature) Red List as vulnerable throughout its range and critically endangered in the western north Atlantic. In 2014, the species was protected globally under Appendix II of CITES (Convention on International Trade in Endangered Species), limiting and regulating trade. This study used partial sequences of mitochondrial DNA (mtDNA) control region to determine the population genetic structure of oceanic whitetip sharks across the Atlantic and Indian Oceans. 724 base pairs were obtained from 215 individuals that identifed nine polymorphic sites and defined 12 distinct haplotypes. Total nucleotide diversity (τ) was 0.0013 and haplotype diversity (h) was 0.5953. The Analysis of Molecular Variance (AMOVA) evidenced moderate levels of population structure (ØST = 0.1039) with restricted gene flow between the western and eastern Atlantic Ocean, and a strong relationship between the latter region and the Indian Ocean. Even though the oceanic whitetip is a highly migratory animal the results presented here show that their genetic variability is slightly below average of other pelagic sharks. Additionally, this study recommends that at least two populations in the Atlantic Ocean should be considered distinct (eastern and western Atlantic) and conservation efforts should be focused in areas with the greatest genetic diversity by environmental managers.
publishDate 2016
dc.date.none.fl_str_mv 2016-05-01
2018-12-11T17:03:01Z
2018-12-11T17:03:01Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.1371/journal.pone.0155623
PLoS ONE, v. 11, n. 5, 2016.
1932-6203
http://hdl.handle.net/11449/172988
10.1371/journal.pone.0155623
2-s2.0-84969844564
2-s2.0-84969844564.pdf
url http://dx.doi.org/10.1371/journal.pone.0155623
http://hdl.handle.net/11449/172988
identifier_str_mv PLoS ONE, v. 11, n. 5, 2016.
1932-6203
10.1371/journal.pone.0155623
2-s2.0-84969844564
2-s2.0-84969844564.pdf
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv PLoS ONE
1,164
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.source.none.fl_str_mv Scopus
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
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