Molecular responses to freshwater limitation in the mangrove tree Avicennia germinans (Acanthaceae)

Detalhes bibliográficos
Autor(a) principal: Cruz, Mariana Vargas
Data de Publicação: 2020
Outros Autores: Mori, Gustavo Maruyama [UNESP], Oh, Dong-Ha, Dassanayake, Maheshi, Zucchi, Maria Imaculada, Oliveira, Rafael Silva, Souza, Anete Pereira de
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.1111/mec.15330
http://hdl.handle.net/11449/198407
Resumo: Environmental variation along the geographical space can shape populations by natural selection. In the context of global warming and changing precipitation regimes, it is crucial to understand the role of environmental heterogeneity in tropical trees adaptation, given their disproportional contribution to water and carbon biogeochemical cycles. Here, we investigated how heterogeneity in freshwater availability along tropical wetlands has influenced molecular variations of the black mangrove (Avicennia germinans). A total of 57 trees were sampled at seven sites differing markedly in precipitation regime and riverine freshwater inputs. Using 2,297 genome-wide single nucleotide polymorphic markers, we found signatures of natural selection by the association between variations in allele frequencies and environmental variables, including the precipitation of the warmest quarter and the annual precipitation. Additionally, we found candidate loci for selection based on statistical deviations from neutral expectations of interpopulation differentiation. Most candidate loci within transcribed sequences were functionally associated with central aspects of drought tolerance or plant response to drought. Moreover, our results suggest the occurrence of the rapid evolution of a population, probably in response to sudden and persistent limitations in plant access to soil water, following a road construction in 1974. Observations supporting rapid evolution included the reduction in tree size and changes in allele frequencies and in transcript expression associated with increased drought tolerance through the accumulation of osmoprotectants and antioxidants, biosynthesis of cuticles, protection against protein degradation, stomatal closure, photorespiration and photosynthesis. We describe a major role of spatial heterogeneity in freshwater availability in the specialization of this typically tropical tree.
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spelling Molecular responses to freshwater limitation in the mangrove tree Avicennia germinans (Acanthaceae)Avicennia germinans (Black Mangrove)drought-toleranceecological genomicsnextRADRNA-Seqtropical treeEnvironmental variation along the geographical space can shape populations by natural selection. In the context of global warming and changing precipitation regimes, it is crucial to understand the role of environmental heterogeneity in tropical trees adaptation, given their disproportional contribution to water and carbon biogeochemical cycles. Here, we investigated how heterogeneity in freshwater availability along tropical wetlands has influenced molecular variations of the black mangrove (Avicennia germinans). A total of 57 trees were sampled at seven sites differing markedly in precipitation regime and riverine freshwater inputs. Using 2,297 genome-wide single nucleotide polymorphic markers, we found signatures of natural selection by the association between variations in allele frequencies and environmental variables, including the precipitation of the warmest quarter and the annual precipitation. Additionally, we found candidate loci for selection based on statistical deviations from neutral expectations of interpopulation differentiation. Most candidate loci within transcribed sequences were functionally associated with central aspects of drought tolerance or plant response to drought. Moreover, our results suggest the occurrence of the rapid evolution of a population, probably in response to sudden and persistent limitations in plant access to soil water, following a road construction in 1974. Observations supporting rapid evolution included the reduction in tree size and changes in allele frequencies and in transcript expression associated with increased drought tolerance through the accumulation of osmoprotectants and antioxidants, biosynthesis of cuticles, protection against protein degradation, stomatal closure, photorespiration and photosynthesis. We describe a major role of spatial heterogeneity in freshwater availability in the specialization of this typically tropical tree.Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)Center for Hierarchical Manufacturing, National Science FoundationNational Academy of Sciences, Republic of KoreaDepartment of Plant Biology Institute of Biology University of Campinas (Unicamp)Institute of Biosciences São Paulo State University (Unesp)Department of Biological Sciences Louisiana State University (LSU) LouisianaSão Paulo Agency for Agribusiness Technology (APTA)Institute of Biosciences São Paulo State University (Unesp)FAPESP: 2011/52072-0FAPESP: 2013/08086-1FAPESP: 2013/26793-7FAPESP: 2014/22821-9CNPq: 309661/2014-5CNPq: 448286/2014-9CAPES: 88882.160095/2013-01CAPES: 88887.177158/2018-00CAPES: 99999.008084/2015-07Center for Hierarchical Manufacturing, National Science Foundation: MCB 1616827National Academy of Sciences, Republic of Korea: PJ01317301Universidade Estadual de Campinas (UNICAMP)Universidade Estadual Paulista (Unesp)LouisianaSão Paulo Agency for Agribusiness Technology (APTA)Cruz, Mariana VargasMori, Gustavo Maruyama [UNESP]Oh, Dong-HaDassanayake, MaheshiZucchi, Maria ImaculadaOliveira, Rafael SilvaSouza, Anete Pereira de2020-12-12T01:12:01Z2020-12-12T01:12:01Z2020-01-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article344-362http://dx.doi.org/10.1111/mec.15330Molecular Ecology, v. 29, n. 2, p. 344-362, 2020.1365-294X0962-1083http://hdl.handle.net/11449/19840710.1111/mec.153302-s2.0-85077903696Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengMolecular Ecologyinfo:eu-repo/semantics/openAccess2021-10-23T11:03:03Zoai:repositorio.unesp.br:11449/198407Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462021-10-23T11:03:03Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv Molecular responses to freshwater limitation in the mangrove tree Avicennia germinans (Acanthaceae)
title Molecular responses to freshwater limitation in the mangrove tree Avicennia germinans (Acanthaceae)
spellingShingle Molecular responses to freshwater limitation in the mangrove tree Avicennia germinans (Acanthaceae)
Cruz, Mariana Vargas
Avicennia germinans (Black Mangrove)
drought-tolerance
ecological genomics
nextRAD
RNA-Seq
tropical tree
title_short Molecular responses to freshwater limitation in the mangrove tree Avicennia germinans (Acanthaceae)
title_full Molecular responses to freshwater limitation in the mangrove tree Avicennia germinans (Acanthaceae)
title_fullStr Molecular responses to freshwater limitation in the mangrove tree Avicennia germinans (Acanthaceae)
title_full_unstemmed Molecular responses to freshwater limitation in the mangrove tree Avicennia germinans (Acanthaceae)
title_sort Molecular responses to freshwater limitation in the mangrove tree Avicennia germinans (Acanthaceae)
author Cruz, Mariana Vargas
author_facet Cruz, Mariana Vargas
Mori, Gustavo Maruyama [UNESP]
Oh, Dong-Ha
Dassanayake, Maheshi
Zucchi, Maria Imaculada
Oliveira, Rafael Silva
Souza, Anete Pereira de
author_role author
author2 Mori, Gustavo Maruyama [UNESP]
Oh, Dong-Ha
Dassanayake, Maheshi
Zucchi, Maria Imaculada
Oliveira, Rafael Silva
Souza, Anete Pereira de
author2_role author
author
author
author
author
author
dc.contributor.none.fl_str_mv Universidade Estadual de Campinas (UNICAMP)
Universidade Estadual Paulista (Unesp)
Louisiana
São Paulo Agency for Agribusiness Technology (APTA)
dc.contributor.author.fl_str_mv Cruz, Mariana Vargas
Mori, Gustavo Maruyama [UNESP]
Oh, Dong-Ha
Dassanayake, Maheshi
Zucchi, Maria Imaculada
Oliveira, Rafael Silva
Souza, Anete Pereira de
dc.subject.por.fl_str_mv Avicennia germinans (Black Mangrove)
drought-tolerance
ecological genomics
nextRAD
RNA-Seq
tropical tree
topic Avicennia germinans (Black Mangrove)
drought-tolerance
ecological genomics
nextRAD
RNA-Seq
tropical tree
description Environmental variation along the geographical space can shape populations by natural selection. In the context of global warming and changing precipitation regimes, it is crucial to understand the role of environmental heterogeneity in tropical trees adaptation, given their disproportional contribution to water and carbon biogeochemical cycles. Here, we investigated how heterogeneity in freshwater availability along tropical wetlands has influenced molecular variations of the black mangrove (Avicennia germinans). A total of 57 trees were sampled at seven sites differing markedly in precipitation regime and riverine freshwater inputs. Using 2,297 genome-wide single nucleotide polymorphic markers, we found signatures of natural selection by the association between variations in allele frequencies and environmental variables, including the precipitation of the warmest quarter and the annual precipitation. Additionally, we found candidate loci for selection based on statistical deviations from neutral expectations of interpopulation differentiation. Most candidate loci within transcribed sequences were functionally associated with central aspects of drought tolerance or plant response to drought. Moreover, our results suggest the occurrence of the rapid evolution of a population, probably in response to sudden and persistent limitations in plant access to soil water, following a road construction in 1974. Observations supporting rapid evolution included the reduction in tree size and changes in allele frequencies and in transcript expression associated with increased drought tolerance through the accumulation of osmoprotectants and antioxidants, biosynthesis of cuticles, protection against protein degradation, stomatal closure, photorespiration and photosynthesis. We describe a major role of spatial heterogeneity in freshwater availability in the specialization of this typically tropical tree.
publishDate 2020
dc.date.none.fl_str_mv 2020-12-12T01:12:01Z
2020-12-12T01:12:01Z
2020-01-01
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.1111/mec.15330
Molecular Ecology, v. 29, n. 2, p. 344-362, 2020.
1365-294X
0962-1083
http://hdl.handle.net/11449/198407
10.1111/mec.15330
2-s2.0-85077903696
url http://dx.doi.org/10.1111/mec.15330
http://hdl.handle.net/11449/198407
identifier_str_mv Molecular Ecology, v. 29, n. 2, p. 344-362, 2020.
1365-294X
0962-1083
10.1111/mec.15330
2-s2.0-85077903696
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Molecular Ecology
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv 344-362
dc.source.none.fl_str_mv Scopus
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
repository.mail.fl_str_mv
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