Identification, description and structural analysis of beta phospholipase A 2 inhibitors (sbβPLIs) from Latin American pit vipers indicate a binding site region for basic snake venom phospholipases A 2

Detalhes bibliográficos
Autor(a) principal: Fortes-Dias, Consuelo Latorre
Data de Publicação: 2019
Outros Autores: Fernandes, Carlos Alexandre H. [UNESP], Ortolani, Paula Ladeira, Campos, Patrícia Cota, Melo, L. A., Felicori, Liza Figueiredo, Fontes, Marcos Roberto M. [UNESP]
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.1016/j.toxcx.2019.100009
http://hdl.handle.net/11449/187408
Resumo: Several snake species possess, in their circulating blood, endogenous PLA 2 inhibitors (sbPLIs) with the primary function of natural protection against toxic enzymes from homologous and heterologous venoms. Among the three structural classes of sbPLIs – named α, β, and γ − the β class (sbβPLIs) is the least known with only four identified sequences, so far. The last class of inhibitors encompass molecules with leucine rich repeats (LRRs) motifs containing repeating amino acid segments. In the present study, we identified and characterized putative sbβPLIs from the liver and venom glands of six Latin American pit vipers belonging to Bothrops and Crotalus genera. The inhibitor from Crotalus durissus terrificus snakes (CdtsbβPLI) was chosen as a reference for the construction of the first in silico structural model for this class of inhibitors, using molecular modeling and molecular dynamics simulations. Detailed analyses of the electrostatic surface of the CdtsbβPLI model and protein-protein docking with crotoxin B from homologous venoms predict the interacting surface between these proteins.
id UNSP_5fa9b7b6f9e73039f6145a0eee55153b
oai_identifier_str oai:repositorio.unesp.br:11449/187408
network_acronym_str UNSP
network_name_str Repositório Institucional da UNESP
repository_id_str 2946
spelling Identification, description and structural analysis of beta phospholipase A 2 inhibitors (sbβPLIs) from Latin American pit vipers indicate a binding site region for basic snake venom phospholipases A 2Beta inhibitorsPhospholipase A 2Phospholipase A 2 inhibitorPit viperSnake liverSnake venom glandViperidaeSeveral snake species possess, in their circulating blood, endogenous PLA 2 inhibitors (sbPLIs) with the primary function of natural protection against toxic enzymes from homologous and heterologous venoms. Among the three structural classes of sbPLIs – named α, β, and γ − the β class (sbβPLIs) is the least known with only four identified sequences, so far. The last class of inhibitors encompass molecules with leucine rich repeats (LRRs) motifs containing repeating amino acid segments. In the present study, we identified and characterized putative sbβPLIs from the liver and venom glands of six Latin American pit vipers belonging to Bothrops and Crotalus genera. The inhibitor from Crotalus durissus terrificus snakes (CdtsbβPLI) was chosen as a reference for the construction of the first in silico structural model for this class of inhibitors, using molecular modeling and molecular dynamics simulations. Detailed analyses of the electrostatic surface of the CdtsbβPLI model and protein-protein docking with crotoxin B from homologous venoms predict the interacting surface between these proteins.Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)Fundação de Amparo à Pesquisa do Estado de Minas Gerais (FAPEMIG)Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)Serviço de Enzimologia Diretoria de Pesquisa e Desenvolvimento Fundação Ezequiel Dias (FUNED)Departamento de Física e Biofísica Instituto de Biociências Universidade Estadual Paulista (UNESP)Departamento de Genética Instituto de Biociências Universidade Estadual Paulista (UNESP)Departamento de Bioquímica e Imunologia Universidade Federal de Minas Gerais (UFMG)Departamento de Física e Biofísica Instituto de Biociências Universidade Estadual Paulista (UNESP)Departamento de Genética Instituto de Biociências Universidade Estadual Paulista (UNESP)Fundação Ezequiel Dias (FUNED)Universidade Estadual Paulista (Unesp)Universidade Federal de Minas Gerais (UFMG)Fortes-Dias, Consuelo LatorreFernandes, Carlos Alexandre H. [UNESP]Ortolani, Paula LadeiraCampos, Patrícia CotaMelo, L. A.Felicori, Liza FigueiredoFontes, Marcos Roberto M. [UNESP]2019-10-06T15:35:15Z2019-10-06T15:35:15Z2019-04-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttp://dx.doi.org/10.1016/j.toxcx.2019.100009Toxicon: X, v. 2.2590-1710http://hdl.handle.net/11449/18740810.1016/j.toxcx.2019.1000092-s2.0-850622289214320362411241786Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengToxicon: Xinfo:eu-repo/semantics/openAccess2021-10-23T19:49:57Zoai:repositorio.unesp.br:11449/187408Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462021-10-23T19:49:57Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv Identification, description and structural analysis of beta phospholipase A 2 inhibitors (sbβPLIs) from Latin American pit vipers indicate a binding site region for basic snake venom phospholipases A 2
title Identification, description and structural analysis of beta phospholipase A 2 inhibitors (sbβPLIs) from Latin American pit vipers indicate a binding site region for basic snake venom phospholipases A 2
spellingShingle Identification, description and structural analysis of beta phospholipase A 2 inhibitors (sbβPLIs) from Latin American pit vipers indicate a binding site region for basic snake venom phospholipases A 2
Fortes-Dias, Consuelo Latorre
Beta inhibitors
Phospholipase A 2
Phospholipase A 2 inhibitor
Pit viper
Snake liver
Snake venom gland
Viperidae
title_short Identification, description and structural analysis of beta phospholipase A 2 inhibitors (sbβPLIs) from Latin American pit vipers indicate a binding site region for basic snake venom phospholipases A 2
title_full Identification, description and structural analysis of beta phospholipase A 2 inhibitors (sbβPLIs) from Latin American pit vipers indicate a binding site region for basic snake venom phospholipases A 2
title_fullStr Identification, description and structural analysis of beta phospholipase A 2 inhibitors (sbβPLIs) from Latin American pit vipers indicate a binding site region for basic snake venom phospholipases A 2
title_full_unstemmed Identification, description and structural analysis of beta phospholipase A 2 inhibitors (sbβPLIs) from Latin American pit vipers indicate a binding site region for basic snake venom phospholipases A 2
title_sort Identification, description and structural analysis of beta phospholipase A 2 inhibitors (sbβPLIs) from Latin American pit vipers indicate a binding site region for basic snake venom phospholipases A 2
author Fortes-Dias, Consuelo Latorre
author_facet Fortes-Dias, Consuelo Latorre
Fernandes, Carlos Alexandre H. [UNESP]
Ortolani, Paula Ladeira
Campos, Patrícia Cota
Melo, L. A.
Felicori, Liza Figueiredo
Fontes, Marcos Roberto M. [UNESP]
author_role author
author2 Fernandes, Carlos Alexandre H. [UNESP]
Ortolani, Paula Ladeira
Campos, Patrícia Cota
Melo, L. A.
Felicori, Liza Figueiredo
Fontes, Marcos Roberto M. [UNESP]
author2_role author
author
author
author
author
author
dc.contributor.none.fl_str_mv Fundação Ezequiel Dias (FUNED)
Universidade Estadual Paulista (Unesp)
Universidade Federal de Minas Gerais (UFMG)
dc.contributor.author.fl_str_mv Fortes-Dias, Consuelo Latorre
Fernandes, Carlos Alexandre H. [UNESP]
Ortolani, Paula Ladeira
Campos, Patrícia Cota
Melo, L. A.
Felicori, Liza Figueiredo
Fontes, Marcos Roberto M. [UNESP]
dc.subject.por.fl_str_mv Beta inhibitors
Phospholipase A 2
Phospholipase A 2 inhibitor
Pit viper
Snake liver
Snake venom gland
Viperidae
topic Beta inhibitors
Phospholipase A 2
Phospholipase A 2 inhibitor
Pit viper
Snake liver
Snake venom gland
Viperidae
description Several snake species possess, in their circulating blood, endogenous PLA 2 inhibitors (sbPLIs) with the primary function of natural protection against toxic enzymes from homologous and heterologous venoms. Among the three structural classes of sbPLIs – named α, β, and γ − the β class (sbβPLIs) is the least known with only four identified sequences, so far. The last class of inhibitors encompass molecules with leucine rich repeats (LRRs) motifs containing repeating amino acid segments. In the present study, we identified and characterized putative sbβPLIs from the liver and venom glands of six Latin American pit vipers belonging to Bothrops and Crotalus genera. The inhibitor from Crotalus durissus terrificus snakes (CdtsbβPLI) was chosen as a reference for the construction of the first in silico structural model for this class of inhibitors, using molecular modeling and molecular dynamics simulations. Detailed analyses of the electrostatic surface of the CdtsbβPLI model and protein-protein docking with crotoxin B from homologous venoms predict the interacting surface between these proteins.
publishDate 2019
dc.date.none.fl_str_mv 2019-10-06T15:35:15Z
2019-10-06T15:35:15Z
2019-04-01
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.1016/j.toxcx.2019.100009
Toxicon: X, v. 2.
2590-1710
http://hdl.handle.net/11449/187408
10.1016/j.toxcx.2019.100009
2-s2.0-85062228921
4320362411241786
url http://dx.doi.org/10.1016/j.toxcx.2019.100009
http://hdl.handle.net/11449/187408
identifier_str_mv Toxicon: X, v. 2.
2590-1710
10.1016/j.toxcx.2019.100009
2-s2.0-85062228921
4320362411241786
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Toxicon: X
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.source.none.fl_str_mv Scopus
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
repository.mail.fl_str_mv
_version_ 1797789843350093824