A machine learning prediction model for waiting time to kidney transplant

Detalhes bibliográficos
Autor(a) principal: Sapiertein Silva, Juliana Feiman [UNESP]
Data de Publicação: 2021
Outros Autores: Ferreira, Gustavo Fernandes, Perosa, Marcelo, Nga, Hong Si [UNESP], de Andrade, Luis Gustavo Modelli [UNESP]
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.1371/journal.pone.0252069
http://hdl.handle.net/11449/206356
Resumo: Background Predicting waiting time for a deceased donor kidney transplant can help patients and clinicians to discuss management and contribute to a more efficient use of resources. This study aimed at developing a predictor model to estimate time on a kidney transplant waiting list using a machine learning approach. Methods A retrospective cohort study including data of patients registered, between January 1, 2000 and December 31, 2017, in the waiting list of São Paulo State Organ Allocation System (SP-OAS) /Brazil. Data were randomly divided into two groups: 75% for training and 25% for testing. A Cox regression model was fitted with deceased donor transplant as the outcome. Sensitivity analyses were performed using different Cox models. Cox hazard ratios were used to develop the risk-prediction equations. Results Of 54,055 records retrieved, 48,153 registries were included in the final analysis. During the study period, approximately 1/3 of the patients were transplanted with a deceased donor. The major characteristics associated with changes in the likelihood of transplantation were age, subregion, cPRA, and frequency of HLA-DR, -B and -A. The model developed was able to predict waiting time with good agreement in internal validation (c-index = 0.70). Conclusion The kidney transplant waiting time calculator developed shows good predictive performance and provides information that may be valuable in assisting candidates and their providers. Moreover, it can significantly improve the use of economic resources and the management of patient care before transplant.
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spelling A machine learning prediction model for waiting time to kidney transplantBackground Predicting waiting time for a deceased donor kidney transplant can help patients and clinicians to discuss management and contribute to a more efficient use of resources. This study aimed at developing a predictor model to estimate time on a kidney transplant waiting list using a machine learning approach. Methods A retrospective cohort study including data of patients registered, between January 1, 2000 and December 31, 2017, in the waiting list of São Paulo State Organ Allocation System (SP-OAS) /Brazil. Data were randomly divided into two groups: 75% for training and 25% for testing. A Cox regression model was fitted with deceased donor transplant as the outcome. Sensitivity analyses were performed using different Cox models. Cox hazard ratios were used to develop the risk-prediction equations. Results Of 54,055 records retrieved, 48,153 registries were included in the final analysis. During the study period, approximately 1/3 of the patients were transplanted with a deceased donor. The major characteristics associated with changes in the likelihood of transplantation were age, subregion, cPRA, and frequency of HLA-DR, -B and -A. The model developed was able to predict waiting time with good agreement in internal validation (c-index = 0.70). Conclusion The kidney transplant waiting time calculator developed shows good predictive performance and provides information that may be valuable in assisting candidates and their providers. Moreover, it can significantly improve the use of economic resources and the management of patient care before transplant.Department of Internal Medicine UNESP Univ Estadual PaulistaTransplant Unit–Santa Casa Juiz de ForaKidney-Pancreas Transplantation Service of Leforte and Oswaldo Cruz HospitalsTransplant Unit DivisionTransplant Unit Division LiberdadeDepartment of Internal Medicine UNESP Univ Estadual PaulistaUniversidade Estadual Paulista (Unesp)Transplant Unit–Santa Casa Juiz de ForaKidney-Pancreas Transplantation Service of Leforte and Oswaldo Cruz HospitalsTransplant Unit DivisionLiberdadeSapiertein Silva, Juliana Feiman [UNESP]Ferreira, Gustavo FernandesPerosa, MarceloNga, Hong Si [UNESP]de Andrade, Luis Gustavo Modelli [UNESP]2021-06-25T10:30:44Z2021-06-25T10:30:44Z2021-05-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttp://dx.doi.org/10.1371/journal.pone.0252069PLoS ONE, v. 16, n. 5 May, 2021.1932-6203http://hdl.handle.net/11449/20635610.1371/journal.pone.02520692-s2.0-85106011193Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengPLoS ONEinfo:eu-repo/semantics/openAccess2021-10-23T04:16:00Zoai:repositorio.unesp.br:11449/206356Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462021-10-23T04:16Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv A machine learning prediction model for waiting time to kidney transplant
title A machine learning prediction model for waiting time to kidney transplant
spellingShingle A machine learning prediction model for waiting time to kidney transplant
Sapiertein Silva, Juliana Feiman [UNESP]
title_short A machine learning prediction model for waiting time to kidney transplant
title_full A machine learning prediction model for waiting time to kidney transplant
title_fullStr A machine learning prediction model for waiting time to kidney transplant
title_full_unstemmed A machine learning prediction model for waiting time to kidney transplant
title_sort A machine learning prediction model for waiting time to kidney transplant
author Sapiertein Silva, Juliana Feiman [UNESP]
author_facet Sapiertein Silva, Juliana Feiman [UNESP]
Ferreira, Gustavo Fernandes
Perosa, Marcelo
Nga, Hong Si [UNESP]
de Andrade, Luis Gustavo Modelli [UNESP]
author_role author
author2 Ferreira, Gustavo Fernandes
Perosa, Marcelo
Nga, Hong Si [UNESP]
de Andrade, Luis Gustavo Modelli [UNESP]
author2_role author
author
author
author
dc.contributor.none.fl_str_mv Universidade Estadual Paulista (Unesp)
Transplant Unit–Santa Casa Juiz de Fora
Kidney-Pancreas Transplantation Service of Leforte and Oswaldo Cruz Hospitals
Transplant Unit Division
Liberdade
dc.contributor.author.fl_str_mv Sapiertein Silva, Juliana Feiman [UNESP]
Ferreira, Gustavo Fernandes
Perosa, Marcelo
Nga, Hong Si [UNESP]
de Andrade, Luis Gustavo Modelli [UNESP]
description Background Predicting waiting time for a deceased donor kidney transplant can help patients and clinicians to discuss management and contribute to a more efficient use of resources. This study aimed at developing a predictor model to estimate time on a kidney transplant waiting list using a machine learning approach. Methods A retrospective cohort study including data of patients registered, between January 1, 2000 and December 31, 2017, in the waiting list of São Paulo State Organ Allocation System (SP-OAS) /Brazil. Data were randomly divided into two groups: 75% for training and 25% for testing. A Cox regression model was fitted with deceased donor transplant as the outcome. Sensitivity analyses were performed using different Cox models. Cox hazard ratios were used to develop the risk-prediction equations. Results Of 54,055 records retrieved, 48,153 registries were included in the final analysis. During the study period, approximately 1/3 of the patients were transplanted with a deceased donor. The major characteristics associated with changes in the likelihood of transplantation were age, subregion, cPRA, and frequency of HLA-DR, -B and -A. The model developed was able to predict waiting time with good agreement in internal validation (c-index = 0.70). Conclusion The kidney transplant waiting time calculator developed shows good predictive performance and provides information that may be valuable in assisting candidates and their providers. Moreover, it can significantly improve the use of economic resources and the management of patient care before transplant.
publishDate 2021
dc.date.none.fl_str_mv 2021-06-25T10:30:44Z
2021-06-25T10:30:44Z
2021-05-01
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.1371/journal.pone.0252069
PLoS ONE, v. 16, n. 5 May, 2021.
1932-6203
http://hdl.handle.net/11449/206356
10.1371/journal.pone.0252069
2-s2.0-85106011193
url http://dx.doi.org/10.1371/journal.pone.0252069
http://hdl.handle.net/11449/206356
identifier_str_mv PLoS ONE, v. 16, n. 5 May, 2021.
1932-6203
10.1371/journal.pone.0252069
2-s2.0-85106011193
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv PLoS ONE
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.source.none.fl_str_mv Scopus
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
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institution UNESP
reponame_str Repositório Institucional da UNESP
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