Bacterial functional redundancy along a soil reclamation gradient

Detalhes bibliográficos
Autor(a) principal: Yin, B.
Data de Publicação: 2000
Outros Autores: Crowley, D., Sparovek, G., De Melo, W. J., Borneman, J.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.1128/AEM.66.10.4361-4365.2000
http://hdl.handle.net/11449/3957
Resumo: A strategy to measure bacterial functional redundancy was developed and tested with soils collected along a soil reclamation gradient by determining the richness and diversity of bacterial groups capable of in situ growth on selected carbon substrates. Soil cores were collected from four sites along a transect from the Jamari tin mine site in the Jamari National Forest, Rondonia, RO, Brazil: denuded mine spoil, soil from below the canopy of invading pioneer trees, revegetated soil under new growth on the forest edge, and the forest floor of an adjacent preserved forest. Bacterial population responses were analyzed by amending these soil samples with individual carbon substrates in the presence of bromodeoxyuridine (BrdU), BrdU-labeled DNA was then subjected to a 16S-23S rRNA intergenic analysis to depict the actively growing bacteria from each site, the number and diversity of bacterial groups responding to four carbon substrates (L-serine, L-threonine, sodium citrate, and or-lactose hydrate) increased along the reclamation-vegetation gradient such that the preserved forest soil samples contained the highest functional redundancy for each substrate. These data suggest that bacterial functional redundancy increases in relation to the regrowth of plant communities and may therefore represent an important aspect of the restoration of soil biological functionality to reclaimed mine spoils. They also suggest that bacterial functional redundancy may be a useful indicator of soil quality and ecosystem functioning.
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spelling Bacterial functional redundancy along a soil reclamation gradientA strategy to measure bacterial functional redundancy was developed and tested with soils collected along a soil reclamation gradient by determining the richness and diversity of bacterial groups capable of in situ growth on selected carbon substrates. Soil cores were collected from four sites along a transect from the Jamari tin mine site in the Jamari National Forest, Rondonia, RO, Brazil: denuded mine spoil, soil from below the canopy of invading pioneer trees, revegetated soil under new growth on the forest edge, and the forest floor of an adjacent preserved forest. Bacterial population responses were analyzed by amending these soil samples with individual carbon substrates in the presence of bromodeoxyuridine (BrdU), BrdU-labeled DNA was then subjected to a 16S-23S rRNA intergenic analysis to depict the actively growing bacteria from each site, the number and diversity of bacterial groups responding to four carbon substrates (L-serine, L-threonine, sodium citrate, and or-lactose hydrate) increased along the reclamation-vegetation gradient such that the preserved forest soil samples contained the highest functional redundancy for each substrate. These data suggest that bacterial functional redundancy increases in relation to the regrowth of plant communities and may therefore represent an important aspect of the restoration of soil biological functionality to reclaimed mine spoils. They also suggest that bacterial functional redundancy may be a useful indicator of soil quality and ecosystem functioning.Univ Calif Riverside, Dept Plant Pathol, Riverside, CA 92521 USAUniv Calif Riverside, Dept Environm Sci, Riverside, CA 92521 USAUniv São Paulo, ESALQ, Dept Soil Sci, BR-13418900 Piracicaba, BrazilUniv Estadual Paulista, Dept Technol, BR-14870000 Jaboticabal, SP, BrazilUniv Estadual Paulista, Dept Technol, BR-14870000 Jaboticabal, SP, BrazilAmer Soc MicrobiologyUniversity of California, Riverside (UCR)Universidade de São Paulo (USP)Universidade Estadual Paulista (Unesp)Yin, B.Crowley, D.Sparovek, G.De Melo, W. J.Borneman, J.2014-05-20T13:17:31Z2014-05-20T13:17:31Z2000-10-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article4361-4365application/pdfhttp://dx.doi.org/10.1128/AEM.66.10.4361-4365.2000Applied and Environmental Microbiology. Washington: Amer Soc Microbiology, v. 66, n. 10, p. 4361-4365, 2000.0099-2240http://hdl.handle.net/11449/395710.1128/AEM.66.10.4361-4365.2000WOS:000089649700028WOS000089649700028.pdfWeb of Sciencereponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengApplied and Environmental Microbiology3.6331,684info:eu-repo/semantics/openAccess2023-12-08T06:25:19Zoai:repositorio.unesp.br:11449/3957Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462023-12-08T06:25:19Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv Bacterial functional redundancy along a soil reclamation gradient
title Bacterial functional redundancy along a soil reclamation gradient
spellingShingle Bacterial functional redundancy along a soil reclamation gradient
Yin, B.
title_short Bacterial functional redundancy along a soil reclamation gradient
title_full Bacterial functional redundancy along a soil reclamation gradient
title_fullStr Bacterial functional redundancy along a soil reclamation gradient
title_full_unstemmed Bacterial functional redundancy along a soil reclamation gradient
title_sort Bacterial functional redundancy along a soil reclamation gradient
author Yin, B.
author_facet Yin, B.
Crowley, D.
Sparovek, G.
De Melo, W. J.
Borneman, J.
author_role author
author2 Crowley, D.
Sparovek, G.
De Melo, W. J.
Borneman, J.
author2_role author
author
author
author
dc.contributor.none.fl_str_mv University of California, Riverside (UCR)
Universidade de São Paulo (USP)
Universidade Estadual Paulista (Unesp)
dc.contributor.author.fl_str_mv Yin, B.
Crowley, D.
Sparovek, G.
De Melo, W. J.
Borneman, J.
description A strategy to measure bacterial functional redundancy was developed and tested with soils collected along a soil reclamation gradient by determining the richness and diversity of bacterial groups capable of in situ growth on selected carbon substrates. Soil cores were collected from four sites along a transect from the Jamari tin mine site in the Jamari National Forest, Rondonia, RO, Brazil: denuded mine spoil, soil from below the canopy of invading pioneer trees, revegetated soil under new growth on the forest edge, and the forest floor of an adjacent preserved forest. Bacterial population responses were analyzed by amending these soil samples with individual carbon substrates in the presence of bromodeoxyuridine (BrdU), BrdU-labeled DNA was then subjected to a 16S-23S rRNA intergenic analysis to depict the actively growing bacteria from each site, the number and diversity of bacterial groups responding to four carbon substrates (L-serine, L-threonine, sodium citrate, and or-lactose hydrate) increased along the reclamation-vegetation gradient such that the preserved forest soil samples contained the highest functional redundancy for each substrate. These data suggest that bacterial functional redundancy increases in relation to the regrowth of plant communities and may therefore represent an important aspect of the restoration of soil biological functionality to reclaimed mine spoils. They also suggest that bacterial functional redundancy may be a useful indicator of soil quality and ecosystem functioning.
publishDate 2000
dc.date.none.fl_str_mv 2000-10-01
2014-05-20T13:17:31Z
2014-05-20T13:17:31Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.1128/AEM.66.10.4361-4365.2000
Applied and Environmental Microbiology. Washington: Amer Soc Microbiology, v. 66, n. 10, p. 4361-4365, 2000.
0099-2240
http://hdl.handle.net/11449/3957
10.1128/AEM.66.10.4361-4365.2000
WOS:000089649700028
WOS000089649700028.pdf
url http://dx.doi.org/10.1128/AEM.66.10.4361-4365.2000
http://hdl.handle.net/11449/3957
identifier_str_mv Applied and Environmental Microbiology. Washington: Amer Soc Microbiology, v. 66, n. 10, p. 4361-4365, 2000.
0099-2240
10.1128/AEM.66.10.4361-4365.2000
WOS:000089649700028
WOS000089649700028.pdf
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Applied and Environmental Microbiology
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dc.format.none.fl_str_mv 4361-4365
application/pdf
dc.publisher.none.fl_str_mv Amer Soc Microbiology
publisher.none.fl_str_mv Amer Soc Microbiology
dc.source.none.fl_str_mv Web of Science
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
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reponame_str Repositório Institucional da UNESP
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repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
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