Development of an operational substrate for ZapA, a metalloprotease secreted by the bacterium Proteus mirabilis

Detalhes bibliográficos
Autor(a) principal: Fernandes, B. L.
Data de Publicação: 2000
Outros Autores: Anéas, M. A. F., Juliano, L., Palma, Mario Sergio [UNESP], Lebrun, I., Portaro, F. C. V.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.1590/S0100-879X2000000700006
http://hdl.handle.net/11449/19666
Resumo: The protease ZapA, secreted by Proteus mirabilis, has been considered to be a virulence factor of this opportunistic bacterium. The control of its expression requires the use of an appropriate methodology, which until now has not been developed. The present study focused on the replacement of azocasein with fluorogenic substrates, and on the definition of enzyme specificity. Eight fluorogenic substrates were tested, and the peptide Abz-Ala-Phe-Arg-Ser-Ala-Ala-Gln-EDDnp was found to be the most convenient for use as an operational substrate for ZapA. A single peptide bond (Arg-Ser) was cleaved with a Km of 4.6 µM, a k cat of 1.73 s-1, and a catalytic efficiency of 376 (mM s)-1. Another good substrate for ZapA was peptide 6 (Abz-Arg-Pro-Pro-Gly-Phe-Ser-Pro-Phe-Arg-Gln-EDDnp) which was cleaved at a single bond (Phe-Ser) with a Km of 13.6 µM, a k cat of 3.96 s-1 and a catalytic efficiency of 291 (mM s)-1. The properties of the amino acids flanking the scissile bonds were also evaluated, and no clear requirement for the amino acid residue at P1 was found, although the enzyme seems to have a preference for a hydrophobic residue at P2.
id UNSP_8b2aeecee0972b7dd5a8a303974cadcc
oai_identifier_str oai:repositorio.unesp.br:11449/19666
network_acronym_str UNSP
network_name_str Repositório Institucional da UNESP
repository_id_str 2946
spelling Development of an operational substrate for ZapA, a metalloprotease secreted by the bacterium Proteus mirabilismetalloproteasesubstrate specificityquenched fluorescence peptidesProteus mirabilisThe protease ZapA, secreted by Proteus mirabilis, has been considered to be a virulence factor of this opportunistic bacterium. The control of its expression requires the use of an appropriate methodology, which until now has not been developed. The present study focused on the replacement of azocasein with fluorogenic substrates, and on the definition of enzyme specificity. Eight fluorogenic substrates were tested, and the peptide Abz-Ala-Phe-Arg-Ser-Ala-Ala-Gln-EDDnp was found to be the most convenient for use as an operational substrate for ZapA. A single peptide bond (Arg-Ser) was cleaved with a Km of 4.6 µM, a k cat of 1.73 s-1, and a catalytic efficiency of 376 (mM s)-1. Another good substrate for ZapA was peptide 6 (Abz-Arg-Pro-Pro-Gly-Phe-Ser-Pro-Phe-Arg-Gln-EDDnp) which was cleaved at a single bond (Phe-Ser) with a Km of 13.6 µM, a k cat of 3.96 s-1 and a catalytic efficiency of 291 (mM s)-1. The properties of the amino acids flanking the scissile bonds were also evaluated, and no clear requirement for the amino acid residue at P1 was found, although the enzyme seems to have a preference for a hydrophobic residue at P2.Universidade de São Paulo (USP)Universidade Federal de São Paulo (UNIFESP)Universidade Estadual Paulista (UNESP)Instituto ButantanAssociação Brasileira de Divulgação Científica (ABRADIC)Universidade de São Paulo (USP)Universidade Federal de São Paulo (UNIFESP)Universidade Estadual Paulista (Unesp)Instituto ButantanFernandes, B. L.Anéas, M. A. F.Juliano, L.Palma, Mario Sergio [UNESP]Lebrun, I.Portaro, F. C. V.2014-05-20T13:54:58Z2014-05-20T13:54:58Z2000-07-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article765-770application/pdfhttp://dx.doi.org/10.1590/S0100-879X2000000700006Brazilian Journal of Medical and Biological Research. Associação Brasileira de Divulgação Científica, v. 33, n. 7, p. 765-770, 2000.0100-879Xhttp://hdl.handle.net/11449/1966610.1590/S0100-879X2000000700006S0100-879X2000000700006S0100-879X2000000700006.pdf2901888624506535SciELOreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengBrazilian Journal of Medical and Biological Research1.492info:eu-repo/semantics/openAccess2023-12-13T06:22:55Zoai:repositorio.unesp.br:11449/19666Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462023-12-13T06:22:55Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv Development of an operational substrate for ZapA, a metalloprotease secreted by the bacterium Proteus mirabilis
title Development of an operational substrate for ZapA, a metalloprotease secreted by the bacterium Proteus mirabilis
spellingShingle Development of an operational substrate for ZapA, a metalloprotease secreted by the bacterium Proteus mirabilis
Fernandes, B. L.
metalloprotease
substrate specificity
quenched fluorescence peptides
Proteus mirabilis
title_short Development of an operational substrate for ZapA, a metalloprotease secreted by the bacterium Proteus mirabilis
title_full Development of an operational substrate for ZapA, a metalloprotease secreted by the bacterium Proteus mirabilis
title_fullStr Development of an operational substrate for ZapA, a metalloprotease secreted by the bacterium Proteus mirabilis
title_full_unstemmed Development of an operational substrate for ZapA, a metalloprotease secreted by the bacterium Proteus mirabilis
title_sort Development of an operational substrate for ZapA, a metalloprotease secreted by the bacterium Proteus mirabilis
author Fernandes, B. L.
author_facet Fernandes, B. L.
Anéas, M. A. F.
Juliano, L.
Palma, Mario Sergio [UNESP]
Lebrun, I.
Portaro, F. C. V.
author_role author
author2 Anéas, M. A. F.
Juliano, L.
Palma, Mario Sergio [UNESP]
Lebrun, I.
Portaro, F. C. V.
author2_role author
author
author
author
author
dc.contributor.none.fl_str_mv Universidade de São Paulo (USP)
Universidade Federal de São Paulo (UNIFESP)
Universidade Estadual Paulista (Unesp)
Instituto Butantan
dc.contributor.author.fl_str_mv Fernandes, B. L.
Anéas, M. A. F.
Juliano, L.
Palma, Mario Sergio [UNESP]
Lebrun, I.
Portaro, F. C. V.
dc.subject.por.fl_str_mv metalloprotease
substrate specificity
quenched fluorescence peptides
Proteus mirabilis
topic metalloprotease
substrate specificity
quenched fluorescence peptides
Proteus mirabilis
description The protease ZapA, secreted by Proteus mirabilis, has been considered to be a virulence factor of this opportunistic bacterium. The control of its expression requires the use of an appropriate methodology, which until now has not been developed. The present study focused on the replacement of azocasein with fluorogenic substrates, and on the definition of enzyme specificity. Eight fluorogenic substrates were tested, and the peptide Abz-Ala-Phe-Arg-Ser-Ala-Ala-Gln-EDDnp was found to be the most convenient for use as an operational substrate for ZapA. A single peptide bond (Arg-Ser) was cleaved with a Km of 4.6 µM, a k cat of 1.73 s-1, and a catalytic efficiency of 376 (mM s)-1. Another good substrate for ZapA was peptide 6 (Abz-Arg-Pro-Pro-Gly-Phe-Ser-Pro-Phe-Arg-Gln-EDDnp) which was cleaved at a single bond (Phe-Ser) with a Km of 13.6 µM, a k cat of 3.96 s-1 and a catalytic efficiency of 291 (mM s)-1. The properties of the amino acids flanking the scissile bonds were also evaluated, and no clear requirement for the amino acid residue at P1 was found, although the enzyme seems to have a preference for a hydrophobic residue at P2.
publishDate 2000
dc.date.none.fl_str_mv 2000-07-01
2014-05-20T13:54:58Z
2014-05-20T13:54:58Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.1590/S0100-879X2000000700006
Brazilian Journal of Medical and Biological Research. Associação Brasileira de Divulgação Científica, v. 33, n. 7, p. 765-770, 2000.
0100-879X
http://hdl.handle.net/11449/19666
10.1590/S0100-879X2000000700006
S0100-879X2000000700006
S0100-879X2000000700006.pdf
2901888624506535
url http://dx.doi.org/10.1590/S0100-879X2000000700006
http://hdl.handle.net/11449/19666
identifier_str_mv Brazilian Journal of Medical and Biological Research. Associação Brasileira de Divulgação Científica, v. 33, n. 7, p. 765-770, 2000.
0100-879X
10.1590/S0100-879X2000000700006
S0100-879X2000000700006
S0100-879X2000000700006.pdf
2901888624506535
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Brazilian Journal of Medical and Biological Research
1.492
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv 765-770
application/pdf
dc.publisher.none.fl_str_mv Associação Brasileira de Divulgação Científica (ABRADIC)
publisher.none.fl_str_mv Associação Brasileira de Divulgação Científica (ABRADIC)
dc.source.none.fl_str_mv SciELO
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
repository.mail.fl_str_mv
_version_ 1799965274411106304