Crystal packing of a zinc(II)-azide complex with a N,N,S-tridentate thiosemicarbazone ligand: An experimental and computational study

Detalhes bibliográficos
Autor(a) principal: dos Santos, Sinara F.F.
Data de Publicação: 2019
Outros Autores: Oliveira, Aline A., R. Santos, Genisson, Mahmoudi, Ghodrat, Afkhami, Farhad A., Santiago, Patrícia S. [UNESP], Viana, Rommel B., da Silva, Albérico B.F., Santos, Regina H.A.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.1016/j.molstruc.2019.07.045
http://hdl.handle.net/11449/187896
Resumo: The aim of this study was to provide a crystallographic and electronic analysis of a zinc(II)-azide complex with a N,N,S-tridentate thiosemicarbazone ligand. The characterization was performed by single-crystal X-ray diffraction, elemental analysis and FT-IR spectroscopy. This compound showed a distorted square-planar structure and its crystal structure was in the triclinic space group P1¯ with Z = 2. Based on the Hirshfeld surface analysis, the van der Waals forces, N⋅⋅⋅H hydrogen bonds and C–H⋅⋅⋅π are the main intermolecular interactions that stabilize the crystal packing assembly. In addition, the Density Functional Theory (DFT) was used to predict the electronic properties. DFT calculations estimated interaction energy of −12.6 kcal mol−1 required to form the dimer structure. Nevertheless, based on a Natural Bond Orbital (NBO) analysis, two hydrogen bonds between nitrogen atoms of the azide group and the hydrogen atom of the amine one (N–H⋅⋅⋅N) are the main interactions responsible for the stabilization of the dimer structure studied. In addition, we were also able to characterize other important intermolecular interactions as the Sulfur⋅⋅⋅Sulfur and the C–H⋅⋅⋅N formed between the azide groups and the aromatic rings performed with the Quantum Theory of Atoms in Molecules (QTAIM).
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spelling Crystal packing of a zinc(II)-azide complex with a N,N,S-tridentate thiosemicarbazone ligand: An experimental and computational studyChalcogen-chalcogen interactionPseudo-halide ligandSulfur-sulfurThiosemicarbazoneThe aim of this study was to provide a crystallographic and electronic analysis of a zinc(II)-azide complex with a N,N,S-tridentate thiosemicarbazone ligand. The characterization was performed by single-crystal X-ray diffraction, elemental analysis and FT-IR spectroscopy. This compound showed a distorted square-planar structure and its crystal structure was in the triclinic space group P1¯ with Z = 2. Based on the Hirshfeld surface analysis, the van der Waals forces, N⋅⋅⋅H hydrogen bonds and C–H⋅⋅⋅π are the main intermolecular interactions that stabilize the crystal packing assembly. In addition, the Density Functional Theory (DFT) was used to predict the electronic properties. DFT calculations estimated interaction energy of −12.6 kcal mol−1 required to form the dimer structure. Nevertheless, based on a Natural Bond Orbital (NBO) analysis, two hydrogen bonds between nitrogen atoms of the azide group and the hydrogen atom of the amine one (N–H⋅⋅⋅N) are the main interactions responsible for the stabilization of the dimer structure studied. In addition, we were also able to characterize other important intermolecular interactions as the Sulfur⋅⋅⋅Sulfur and the C–H⋅⋅⋅N formed between the azide groups and the aromatic rings performed with the Quantum Theory of Atoms in Molecules (QTAIM).Universidade Estadual PaulistaInstituto de Química de São Carlos Universidade de São Paulo (USP)Unidade de Estudos de Medicina Veterinária Universidade Estadual do Maranhão (UEMA)Escola de Artes Ciências e Humanidades Universidade de São Paulo (USP)Department of Chemistry Faculty of Science University of MaraghehYoung Researchers and Elite Club Tabriz Branch Islamic Azad UniversityUniversidade Estadual Paulista Júlio de Mesquita Filho (UNESP)Instituto de Química Universidade de Alfenas (Unifal)Universidade Estadual Paulista Júlio de Mesquita Filho (UNESP)Universidade de São Paulo (USP)Universidade Estadual de Maringá (UEM)University of MaraghehIslamic Azad UniversityUniversidade Estadual Paulista (Unesp)Universidade de Alfenas (Unifal)dos Santos, Sinara F.F.Oliveira, Aline A.R. Santos, GenissonMahmoudi, GhodratAfkhami, Farhad A.Santiago, Patrícia S. [UNESP]Viana, Rommel B.da Silva, Albérico B.F.Santos, Regina H.A.2019-10-06T15:50:38Z2019-10-06T15:50:38Z2019-12-05info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article393-400http://dx.doi.org/10.1016/j.molstruc.2019.07.045Journal of Molecular Structure, v. 1197, p. 393-400.0022-2860http://hdl.handle.net/11449/18789610.1016/j.molstruc.2019.07.0452-s2.0-8506963915167053670106620870000-0002-6205-9441Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengJournal of Molecular Structureinfo:eu-repo/semantics/openAccess2021-10-23T09:26:38Zoai:repositorio.unesp.br:11449/187896Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462021-10-23T09:26:38Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv Crystal packing of a zinc(II)-azide complex with a N,N,S-tridentate thiosemicarbazone ligand: An experimental and computational study
title Crystal packing of a zinc(II)-azide complex with a N,N,S-tridentate thiosemicarbazone ligand: An experimental and computational study
spellingShingle Crystal packing of a zinc(II)-azide complex with a N,N,S-tridentate thiosemicarbazone ligand: An experimental and computational study
dos Santos, Sinara F.F.
Chalcogen-chalcogen interaction
Pseudo-halide ligand
Sulfur-sulfur
Thiosemicarbazone
title_short Crystal packing of a zinc(II)-azide complex with a N,N,S-tridentate thiosemicarbazone ligand: An experimental and computational study
title_full Crystal packing of a zinc(II)-azide complex with a N,N,S-tridentate thiosemicarbazone ligand: An experimental and computational study
title_fullStr Crystal packing of a zinc(II)-azide complex with a N,N,S-tridentate thiosemicarbazone ligand: An experimental and computational study
title_full_unstemmed Crystal packing of a zinc(II)-azide complex with a N,N,S-tridentate thiosemicarbazone ligand: An experimental and computational study
title_sort Crystal packing of a zinc(II)-azide complex with a N,N,S-tridentate thiosemicarbazone ligand: An experimental and computational study
author dos Santos, Sinara F.F.
author_facet dos Santos, Sinara F.F.
Oliveira, Aline A.
R. Santos, Genisson
Mahmoudi, Ghodrat
Afkhami, Farhad A.
Santiago, Patrícia S. [UNESP]
Viana, Rommel B.
da Silva, Albérico B.F.
Santos, Regina H.A.
author_role author
author2 Oliveira, Aline A.
R. Santos, Genisson
Mahmoudi, Ghodrat
Afkhami, Farhad A.
Santiago, Patrícia S. [UNESP]
Viana, Rommel B.
da Silva, Albérico B.F.
Santos, Regina H.A.
author2_role author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Universidade de São Paulo (USP)
Universidade Estadual de Maringá (UEM)
University of Maragheh
Islamic Azad University
Universidade Estadual Paulista (Unesp)
Universidade de Alfenas (Unifal)
dc.contributor.author.fl_str_mv dos Santos, Sinara F.F.
Oliveira, Aline A.
R. Santos, Genisson
Mahmoudi, Ghodrat
Afkhami, Farhad A.
Santiago, Patrícia S. [UNESP]
Viana, Rommel B.
da Silva, Albérico B.F.
Santos, Regina H.A.
dc.subject.por.fl_str_mv Chalcogen-chalcogen interaction
Pseudo-halide ligand
Sulfur-sulfur
Thiosemicarbazone
topic Chalcogen-chalcogen interaction
Pseudo-halide ligand
Sulfur-sulfur
Thiosemicarbazone
description The aim of this study was to provide a crystallographic and electronic analysis of a zinc(II)-azide complex with a N,N,S-tridentate thiosemicarbazone ligand. The characterization was performed by single-crystal X-ray diffraction, elemental analysis and FT-IR spectroscopy. This compound showed a distorted square-planar structure and its crystal structure was in the triclinic space group P1¯ with Z = 2. Based on the Hirshfeld surface analysis, the van der Waals forces, N⋅⋅⋅H hydrogen bonds and C–H⋅⋅⋅π are the main intermolecular interactions that stabilize the crystal packing assembly. In addition, the Density Functional Theory (DFT) was used to predict the electronic properties. DFT calculations estimated interaction energy of −12.6 kcal mol−1 required to form the dimer structure. Nevertheless, based on a Natural Bond Orbital (NBO) analysis, two hydrogen bonds between nitrogen atoms of the azide group and the hydrogen atom of the amine one (N–H⋅⋅⋅N) are the main interactions responsible for the stabilization of the dimer structure studied. In addition, we were also able to characterize other important intermolecular interactions as the Sulfur⋅⋅⋅Sulfur and the C–H⋅⋅⋅N formed between the azide groups and the aromatic rings performed with the Quantum Theory of Atoms in Molecules (QTAIM).
publishDate 2019
dc.date.none.fl_str_mv 2019-10-06T15:50:38Z
2019-10-06T15:50:38Z
2019-12-05
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.1016/j.molstruc.2019.07.045
Journal of Molecular Structure, v. 1197, p. 393-400.
0022-2860
http://hdl.handle.net/11449/187896
10.1016/j.molstruc.2019.07.045
2-s2.0-85069639151
6705367010662087
0000-0002-6205-9441
url http://dx.doi.org/10.1016/j.molstruc.2019.07.045
http://hdl.handle.net/11449/187896
identifier_str_mv Journal of Molecular Structure, v. 1197, p. 393-400.
0022-2860
10.1016/j.molstruc.2019.07.045
2-s2.0-85069639151
6705367010662087
0000-0002-6205-9441
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Journal of Molecular Structure
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv 393-400
dc.source.none.fl_str_mv Scopus
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
repository.mail.fl_str_mv
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