Intrachromosomal karyotype asymmetry in Orchidaceae

Bibliographic Details
Main Author: Medeiros-Neto, Enoque
Publication Date: 2017
Other Authors: Nollet, Felipe, Moraes, Ana Paula [UNESP], Felix, Leonardo P.
Format: Article
Language: eng
Source: Repositório Institucional da UNESP
Download full: http://dx.doi.org/10.1590/1678-4685-GMB-2016-0264
http://hdl.handle.net/11449/163206
Summary: The asymmetry indexes have helped cytotaxonomists to interpret and classify plant karyotypes for species delimitation efforts. However, there is no consensus about the best method to calculate the intrachromosomal asymmetry. The present study aimed to compare different intrachromosomal asymmetry indexes in order to indicate which are more efficient for the estimation of asymmetry in different groups of orchids. Besides, we aimed to compare our results with the Orchidaceae phylogenetic proposal to test the hypothesis of Stebbins (1971). Through a literature review, karyotypes were selected and analyzed comparatively with ideal karyotypes in a cluster analysis. All karyotypes showed some level of interchromosomal asymmetry, ranging from slightly asymmetric to moderately asymmetric. The five tested intrachromosomal asymmetry indexes indicated Sarcoglottis grandiflora as the species with the most symmetrical karyotype and Christensonella pachyphylla with the most asymmetrical karyotype. In the cluster analysis, the largest number of species were grouped with the intermediary ideal karyotypes B or C. Considering our results, we recommend the combined use of at least two indexes, especially Ask% or A1 with Syi, for cytotaxonomic analysis in groups of orchids. In an evolutionary perspective, our results support Stebbins' hypothesis that asymmetric karyotypes derive from a symmetric karyotypes.
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spelling Intrachromosomal karyotype asymmetry in OrchidaceaeAsymmetry indexkaryotype symmetrychromosomecytogeneticevolutionThe asymmetry indexes have helped cytotaxonomists to interpret and classify plant karyotypes for species delimitation efforts. However, there is no consensus about the best method to calculate the intrachromosomal asymmetry. The present study aimed to compare different intrachromosomal asymmetry indexes in order to indicate which are more efficient for the estimation of asymmetry in different groups of orchids. Besides, we aimed to compare our results with the Orchidaceae phylogenetic proposal to test the hypothesis of Stebbins (1971). Through a literature review, karyotypes were selected and analyzed comparatively with ideal karyotypes in a cluster analysis. All karyotypes showed some level of interchromosomal asymmetry, ranging from slightly asymmetric to moderately asymmetric. The five tested intrachromosomal asymmetry indexes indicated Sarcoglottis grandiflora as the species with the most symmetrical karyotype and Christensonella pachyphylla with the most asymmetrical karyotype. In the cluster analysis, the largest number of species were grouped with the intermediary ideal karyotypes B or C. Considering our results, we recommend the combined use of at least two indexes, especially Ask% or A1 with Syi, for cytotaxonomic analysis in groups of orchids. In an evolutionary perspective, our results support Stebbins' hypothesis that asymmetric karyotypes derive from a symmetric karyotypes.Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)Fundacao de Apoio a Pesquisa de Sao PauloUniv Fed Paraiba, Ctr Ciencias Agr, Lab Citogenet Vegetal, Dept Ciencias Biol, Campus 2, BR-58397000 Areia, PB, BrazilUniv Estadual Paulista, Inst Biociencias, Dept Genet, Botucatu, SP, BrazilUniv Fed Sao Paulo, Inst Ciencias & Tecnol, Sao Jose Dos Campos, SP, BrazilUniv Estadual Paulista, Inst Biociencias, Dept Genet, Botucatu, SP, BrazilCNPq: 400209/2014-4CNPq: 460990/2014-4Fundacao de Apoio a Pesquisa de Sao Paulo: FAPESP 2011/22215-3Soc Brasil GeneticaUniv Fed ParaibaUniversidade Estadual Paulista (Unesp)Universidade Federal de São Paulo (UNIFESP)Medeiros-Neto, EnoqueNollet, FelipeMoraes, Ana Paula [UNESP]Felix, Leonardo P.2018-11-26T17:40:31Z2018-11-26T17:40:31Z2017-07-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article610-619application/pdfhttp://dx.doi.org/10.1590/1678-4685-GMB-2016-0264Genetics And Molecular Biology. Ribeirao Pret: Soc Brasil Genetica, v. 40, n. 3, p. 610-619, 2017.1415-4757http://hdl.handle.net/11449/16320610.1590/1678-4685-GMB-2016-0264S1415-47572017000400610WOS:000409372000008S1415-47572017000400610.pdfWeb of Sciencereponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengGenetics And Molecular Biology0,638info:eu-repo/semantics/openAccess2023-11-24T06:12:44Zoai:repositorio.unesp.br:11449/163206Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462023-11-24T06:12:44Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv Intrachromosomal karyotype asymmetry in Orchidaceae
title Intrachromosomal karyotype asymmetry in Orchidaceae
spellingShingle Intrachromosomal karyotype asymmetry in Orchidaceae
Medeiros-Neto, Enoque
Asymmetry index
karyotype symmetry
chromosome
cytogenetic
evolution
title_short Intrachromosomal karyotype asymmetry in Orchidaceae
title_full Intrachromosomal karyotype asymmetry in Orchidaceae
title_fullStr Intrachromosomal karyotype asymmetry in Orchidaceae
title_full_unstemmed Intrachromosomal karyotype asymmetry in Orchidaceae
title_sort Intrachromosomal karyotype asymmetry in Orchidaceae
author Medeiros-Neto, Enoque
author_facet Medeiros-Neto, Enoque
Nollet, Felipe
Moraes, Ana Paula [UNESP]
Felix, Leonardo P.
author_role author
author2 Nollet, Felipe
Moraes, Ana Paula [UNESP]
Felix, Leonardo P.
author2_role author
author
author
dc.contributor.none.fl_str_mv Univ Fed Paraiba
Universidade Estadual Paulista (Unesp)
Universidade Federal de São Paulo (UNIFESP)
dc.contributor.author.fl_str_mv Medeiros-Neto, Enoque
Nollet, Felipe
Moraes, Ana Paula [UNESP]
Felix, Leonardo P.
dc.subject.por.fl_str_mv Asymmetry index
karyotype symmetry
chromosome
cytogenetic
evolution
topic Asymmetry index
karyotype symmetry
chromosome
cytogenetic
evolution
description The asymmetry indexes have helped cytotaxonomists to interpret and classify plant karyotypes for species delimitation efforts. However, there is no consensus about the best method to calculate the intrachromosomal asymmetry. The present study aimed to compare different intrachromosomal asymmetry indexes in order to indicate which are more efficient for the estimation of asymmetry in different groups of orchids. Besides, we aimed to compare our results with the Orchidaceae phylogenetic proposal to test the hypothesis of Stebbins (1971). Through a literature review, karyotypes were selected and analyzed comparatively with ideal karyotypes in a cluster analysis. All karyotypes showed some level of interchromosomal asymmetry, ranging from slightly asymmetric to moderately asymmetric. The five tested intrachromosomal asymmetry indexes indicated Sarcoglottis grandiflora as the species with the most symmetrical karyotype and Christensonella pachyphylla with the most asymmetrical karyotype. In the cluster analysis, the largest number of species were grouped with the intermediary ideal karyotypes B or C. Considering our results, we recommend the combined use of at least two indexes, especially Ask% or A1 with Syi, for cytotaxonomic analysis in groups of orchids. In an evolutionary perspective, our results support Stebbins' hypothesis that asymmetric karyotypes derive from a symmetric karyotypes.
publishDate 2017
dc.date.none.fl_str_mv 2017-07-01
2018-11-26T17:40:31Z
2018-11-26T17:40:31Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.1590/1678-4685-GMB-2016-0264
Genetics And Molecular Biology. Ribeirao Pret: Soc Brasil Genetica, v. 40, n. 3, p. 610-619, 2017.
1415-4757
http://hdl.handle.net/11449/163206
10.1590/1678-4685-GMB-2016-0264
S1415-47572017000400610
WOS:000409372000008
S1415-47572017000400610.pdf
url http://dx.doi.org/10.1590/1678-4685-GMB-2016-0264
http://hdl.handle.net/11449/163206
identifier_str_mv Genetics And Molecular Biology. Ribeirao Pret: Soc Brasil Genetica, v. 40, n. 3, p. 610-619, 2017.
1415-4757
10.1590/1678-4685-GMB-2016-0264
S1415-47572017000400610
WOS:000409372000008
S1415-47572017000400610.pdf
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Genetics And Molecular Biology
0,638
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv 610-619
application/pdf
dc.publisher.none.fl_str_mv Soc Brasil Genetica
publisher.none.fl_str_mv Soc Brasil Genetica
dc.source.none.fl_str_mv Web of Science
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
repository.mail.fl_str_mv
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